Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788695

Identifier: 91788695

GI number: 91788695

Start: 2987577

End: 2988560

Strand: Direct

Name: 91788695

Synonym: Bpro_2834

Alternate gene names: NA

Gene position: 2987577-2988560 (Clockwise)

Preceding gene: 91788693

Following gene: 91788696

Centisome position: 57.45

GC content: 64.33

Gene sequence:

>984_bases
ATGATGAAACCCTCGCAACTATCGAGAATATTTCCCGCCGTTGTGCTGGCCGCCTGCGCGCTGGCCAGCGCAACCCAGGT
GCTTGCCCAGGATTGGCCGACCAAGTCCGTCCGCATCCTGGTCGGTTCGGCCCCCGGTGGCGGCACCGACGCCATGGCCC
GTGCCGTGGCGGACCGGCTGGGCCCGCTGCTCAAGCAACCGGTGGTGGTGGAAAACCGCCCCGGCGTGTCCAACACGCTG
GCCGCCGACGTCACCGCCAAGGCCACCGACGGCCACACCATGGTGATGGGTGTTTCCACCGCTCACGCCATCGCACCGCA
CCTGCTCAAGCTCGGCTACGACAACAACAAAGACCTGGTGCCGGTGGTGTTTGTCGGTGCGGTGCCCAATGTGCTGGTGG
TCAACAACGCCCTGCCCGCGGATTCGGTCCAGTCGCTCGTCAAGCTCGCCAAGAGCCAGCCCGGCAAACTGAACTACGCC
ACCAGCGGCGCCGGCAGTACCCAGCACATCGCGGCCGAGCTGTTCAAGGACCAGGCTGGCGTCTTCATCACGCACATTCC
ATACCGCGGCAGCGGCCCGGCGCTGGTCGACCTGGTCGGTGGTCAGGTGCAGCTGAGTTTTGACACCATGCCCTCAGTCA
TCGGGCAAATCAAGAACGGCCGCATCCGTGCCCTGGCCGTGGCGGCTTCCCGCCGCAACCCGCAGCTTCCCGATGTGCCC
ACCATGGCCGAAGCCGGTCTCAAGGGTGTGGAAATGAGCGCCTGGTACGGCATCTACATGCCGGCGTCCACGCCGAAAGC
CGTGCAGGATCGCGTCCATGCCGAAGTCACAAAAATTCTGGCCATGCCCGAAACGCAGACCCGCCTGGGCGCCATCGGGG
CGGACCTGACACCGATGACGCAGGCGCAATTCGCCCAGTTTCACACTGCTGAAAACAAACGCTACGGCGACCTGATCGCC
AAAAAGAACATCAGACTGGATTGA

Upstream 100 bases:

>100_bases
ACCACAGATTATCAAATAATCATCAATTTTCAATTTACGTTAACTGTCAGGGTCTCTACCATCAGCGCATTCGTTCACAA
CAATGATCTGGAGACACCTG

Downstream 100 bases:

>100_bases
ACCCATGAGCCAACAAACCACACCGGCAACTACACCGGCAGCCACACCGGTCATTGCCCTGACGTTGGGCGATGCTGCAG
GCATCGGCCCCGAGCTGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MMKPSQLSRIFPAVVLAACALASATQVLAQDWPTKSVRILVGSAPGGGTDAMARAVADRLGPLLKQPVVVENRPGVSNTL
AADVTAKATDGHTMVMGVSTAHAIAPHLLKLGYDNNKDLVPVVFVGAVPNVLVVNNALPADSVQSLVKLAKSQPGKLNYA
TSGAGSTQHIAAELFKDQAGVFITHIPYRGSGPALVDLVGGQVQLSFDTMPSVIGQIKNGRIRALAVAASRRNPQLPDVP
TMAEAGLKGVEMSAWYGIYMPASTPKAVQDRVHAEVTKILAMPETQTRLGAIGADLTPMTQAQFAQFHTAENKRYGDLIA
KKNIRLD

Sequences:

>Translated_327_residues
MMKPSQLSRIFPAVVLAACALASATQVLAQDWPTKSVRILVGSAPGGGTDAMARAVADRLGPLLKQPVVVENRPGVSNTL
AADVTAKATDGHTMVMGVSTAHAIAPHLLKLGYDNNKDLVPVVFVGAVPNVLVVNNALPADSVQSLVKLAKSQPGKLNYA
TSGAGSTQHIAAELFKDQAGVFITHIPYRGSGPALVDLVGGQVQLSFDTMPSVIGQIKNGRIRALAVAASRRNPQLPDVP
TMAEAGLKGVEMSAWYGIYMPASTPKAVQDRVHAEVTKILAMPETQTRLGAIGADLTPMTQAQFAQFHTAENKRYGDLIA
KKNIRLD
>Mature_327_residues
MMKPSQLSRIFPAVVLAACALASATQVLAQDWPTKSVRILVGSAPGGGTDAMARAVADRLGPLLKQPVVVENRPGVSNTL
AADVTAKATDGHTMVMGVSTAHAIAPHLLKLGYDNNKDLVPVVFVGAVPNVLVVNNALPADSVQSLVKLAKSQPGKLNYA
TSGAGSTQHIAAELFKDQAGVFITHIPYRGSGPALVDLVGGQVQLSFDTMPSVIGQIKNGRIRALAVAASRRNPQLPDVP
TMAEAGLKGVEMSAWYGIYMPASTPKAVQDRVHAEVTKILAMPETQTRLGAIGADLTPMTQAQFAQFHTAENKRYGDLIA
KKNIRLD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34393; Mature: 34393

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKPSQLSRIFPAVVLAACALASATQVLAQDWPTKSVRILVGSAPGGGTDAMARAVADRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
GPLLKQPVVVENRPGVSNTLAADVTAKATDGHTMVMGVSTAHAIAPHLLKLGYDNNKDLV
HHHHHCCEEEECCCCCCCCEEECEEEECCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEE
PVVFVGAVPNVLVVNNALPADSVQSLVKLAKSQPGKLNYATSGAGSTQHIAAELFKDQAG
EEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCC
VFITHIPYRGSGPALVDLVGGQVQLSFDTMPSVIGQIKNGRIRALAVAASRRNPQLPDVP
EEEEECCCCCCCCEEEEEECCEEEEEHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC
TMAEAGLKGVEMSAWYGIYMPASTPKAVQDRVHAEVTKILAMPETQTRLGAIGADLTPMT
CHHHCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCH
QAQFAQFHTAENKRYGDLIAKKNIRLD
HHHHHHHHHCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MMKPSQLSRIFPAVVLAACALASATQVLAQDWPTKSVRILVGSAPGGGTDAMARAVADRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
GPLLKQPVVVENRPGVSNTLAADVTAKATDGHTMVMGVSTAHAIAPHLLKLGYDNNKDLV
HHHHHCCEEEECCCCCCCCEEECEEEECCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEE
PVVFVGAVPNVLVVNNALPADSVQSLVKLAKSQPGKLNYATSGAGSTQHIAAELFKDQAG
EEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCC
VFITHIPYRGSGPALVDLVGGQVQLSFDTMPSVIGQIKNGRIRALAVAASRRNPQLPDVP
EEEEECCCCCCCCEEEEEECCEEEEEHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC
TMAEAGLKGVEMSAWYGIYMPASTPKAVQDRVHAEVTKILAMPETQTRLGAIGADLTPMT
CHHHCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCH
QAQFAQFHTAENKRYGDLIAKKNIRLD
HHHHHHHHHCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]