The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is fdx4 [H]

Identifier: 91788628

GI number: 91788628

Start: 2909231

End: 2909584

Strand: Reverse

Name: fdx4 [H]

Synonym: Bpro_2766

Alternate gene names: 91788628

Gene position: 2909584-2909231 (Counterclockwise)

Preceding gene: 91788629

Following gene: 91788627

Centisome position: 55.95

GC content: 62.71

Gene sequence:

>354_bases
ATGAGCGAAGCGGTGGTCAAACCCAAAATTGGCGCTTACAAACGCCATTTGCTGATCTGCACCGGCCCGCGCTGTACGCA
GGATGGTGCGTCGCAGGAGCTGTTCGACAGCCTGGGCGACAAGTTCAAGGCGGCCGGGCTGCACGACGGTGAGATGCGCG
TCAAGCGCAGCCGGGTGAGCTGCTTTGCCGCCTGCAAGGGCGGGCCGGTCATGTGCGTGCAGCCTGATGGCACCTGGTAT
TACAACGTCACGCCCGCCAACATGGACCGCATCATTGACCAGCATCTGGTGGGCGGGCAGCCCGTGGCTGATCTGGTGTT
CCATCAGGGTCCGGGGGACTGCCATGACGTTTGA

Upstream 100 bases:

>100_bases
GCCACAAGCTGCCTGCGGACTACATCGAGGCAGTGCTGACCGCGCCGATTGAAGAAGAGGCCGTCAAGGAAGAAACGGCC
AGTGCCGAGGAATCGGAAGC

Downstream 100 bases:

>100_bases
GGCACAGGAGCACACCGGCCGCGGATTCGTGTCCATCGTGGGTGCAGGCCCGGGCCCGGTCGATTTGATGACGCTGCGGG
CATTCGACCGGCTTCAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: AaFd4 [H]

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSEAVVKPKIGAYKRHLLICTGPRCTQDGASQELFDSLGDKFKAAGLHDGEMRVKRSRVSCFAACKGGPVMCVQPDGTWY
YNVTPANMDRIIDQHLVGGQPVADLVFHQGPGDCHDV

Sequences:

>Translated_117_residues
MSEAVVKPKIGAYKRHLLICTGPRCTQDGASQELFDSLGDKFKAAGLHDGEMRVKRSRVSCFAACKGGPVMCVQPDGTWY
YNVTPANMDRIIDQHLVGGQPVADLVFHQGPGDCHDV
>Mature_116_residues
SEAVVKPKIGAYKRHLLICTGPRCTQDGASQELFDSLGDKFKAAGLHDGEMRVKRSRVSCFAACKGGPVMCVQPDGTWYY
NVTPANMDRIIDQHLVGGQPVADLVFHQGPGDCHDV

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002023
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01257 Complex1_24kDa [H]

EC number: NA

Molecular weight: Translated: 12718; Mature: 12586

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAVVKPKIGAYKRHLLICTGPRCTQDGASQELFDSLGDKFKAAGLHDGEMRVKRSRVS
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCEECCCCCCCHHHHHHHHHH
CFAACKGGPVMCVQPDGTWYYNVTPANMDRIIDQHLVGGQPVADLVFHQGPGDCHDV
EEEECCCCCEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHEEECCCCCCCCC
>Mature Secondary Structure 
SEAVVKPKIGAYKRHLLICTGPRCTQDGASQELFDSLGDKFKAAGLHDGEMRVKRSRVS
CCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCEECCCCCCCHHHHHHHHHH
CFAACKGGPVMCVQPDGTWYYNVTPANMDRIIDQHLVGGQPVADLVFHQGPGDCHDV
EEEECCCCCEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320; 10441520; 10884354; 12089152 [H]