| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is cbiH [H]
Identifier: 91788629
GI number: 91788629
Start: 2909581
End: 2910576
Strand: Reverse
Name: cbiH [H]
Synonym: Bpro_2767
Alternate gene names: 91788629
Gene position: 2910576-2909581 (Counterclockwise)
Preceding gene: 91788630
Following gene: 91788628
Centisome position: 55.97
GC content: 64.56
Gene sequence:
>996_bases ATGACCGGCCCCAAAGGAAAAATCATGCTGGTGGGCATTGGTCCCGGCAGCCATGACCATATGACGCAGCGCGCCCGTGC CGCCATTGCCGAGGCGGACGTGGTGGTGGGCTACGTCACCTACATCAAGCTGGTGGCCGATTTGCTGGAAGGCAAAGAGG TCGTGCGCAAAGGCATGACTGAAGAGCTGGACCGCGCGGTGCACGCGTTGGCCAGCGCCCGCGAAGGCAAGAAGGTTGCG CTCATCTCCAGTGGCGACGCTGGGGTGTATGGCATGGCCGGGCCCACCTATGAGGTGCTGTTCCAGGCCGGCTGGACGCC CGAGTCCGACGTGCAGGTGGAAGTCGTGCCGGGGGCCTCGGCCATCAACGCCTGTGCGGCGCTGGTGGGCGCGCCCCTGA CGCACGACTTCTGCTCGATCTCCCTGTCTGACCTGCTCACGCCCTGGCCGGTGATTGCACGCCGGCTGGATGCGGTGGCG GCATCGGATTTTGTGGTGGCGCTGTACAACCCCAAGAGCGGCCGCCGTACCCAGCAAATCGTGCAGGCACAGCAGCTGTT CTTGCGGCACCGCAGGCCCGACACGCCGGTGGCGGTGGTCAAGTCGGCTTACCGCAGACGCGAGCGCATCGAGTTCACCA CACTGGACAAGATGAGCGACTGCGACATCGGCATGCTCACCACGGTACTGATCGGCAACAGCCACACCTTTGTACGGCAT GGCCTGATGGTTACGCCGCGCGGCTACGCCAACAAGTACGAGCTGCACGGCGATGGCAGCACGCGCGAGGGCGAAAGGCC TGGCCGTTCGCTGTCCACCGGCCTGCTGGGCTGGATGGAAAACCTGCGCATTGACCATGCTGAAGGCGCGAGCGTTGCTG CGCTGGCGTTGCGCCACAAGCTGCCTGCGGACTACATCGAGGCAGTGCTGACCGCGCCGATTGAAGAAGAGGCCGTCAAG GAAGAAACGGCCAGTGCCGAGGAATCGGAAGCATGA
Upstream 100 bases:
>100_bases TGGTATGCGGCGCGGCGTTTCAGCGCTGGCTGCGTCCGGTGCTGGAAGCAACTTTTGAACGCTCGAAGCCGGTTGCATCA GCCGGCACGGCGGTGAGCCC
Downstream 100 bases:
>100_bases GCGAAGCGGTGGTCAAACCCAAAATTGGCGCTTACAAACGCCATTTGCTGATCTGCACCGGCCCGCGCTGTACGCAGGAT GGTGCGTCGCAGGAGCTGTT
Product: precorrin-3 methyltransferase/precorrin-6Y C5,15-methyltransferase
Products: 2S-adenosyl-L-homocysteine; precorrin; sirohydrochlorin; NADH; Proton; siroheme [C]
Alternate protein names: Cobalt-precorrin-3 methylase; Cobalt-precorrin-3 methyltransferase [H]
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MTGPKGKIMLVGIGPGSHDHMTQRARAAIAEADVVVGYVTYIKLVADLLEGKEVVRKGMTEELDRAVHALASAREGKKVA LISSGDAGVYGMAGPTYEVLFQAGWTPESDVQVEVVPGASAINACAALVGAPLTHDFCSISLSDLLTPWPVIARRLDAVA ASDFVVALYNPKSGRRTQQIVQAQQLFLRHRRPDTPVAVVKSAYRRRERIEFTTLDKMSDCDIGMLTTVLIGNSHTFVRH GLMVTPRGYANKYELHGDGSTREGERPGRSLSTGLLGWMENLRIDHAEGASVAALALRHKLPADYIEAVLTAPIEEEAVK EETASAEESEA
Sequences:
>Translated_331_residues MTGPKGKIMLVGIGPGSHDHMTQRARAAIAEADVVVGYVTYIKLVADLLEGKEVVRKGMTEELDRAVHALASAREGKKVA LISSGDAGVYGMAGPTYEVLFQAGWTPESDVQVEVVPGASAINACAALVGAPLTHDFCSISLSDLLTPWPVIARRLDAVA ASDFVVALYNPKSGRRTQQIVQAQQLFLRHRRPDTPVAVVKSAYRRRERIEFTTLDKMSDCDIGMLTTVLIGNSHTFVRH GLMVTPRGYANKYELHGDGSTREGERPGRSLSTGLLGWMENLRIDHAEGASVAALALRHKLPADYIEAVLTAPIEEEAVK EETASAEESEA >Mature_330_residues TGPKGKIMLVGIGPGSHDHMTQRARAAIAEADVVVGYVTYIKLVADLLEGKEVVRKGMTEELDRAVHALASAREGKKVAL ISSGDAGVYGMAGPTYEVLFQAGWTPESDVQVEVVPGASAINACAALVGAPLTHDFCSISLSDLLTPWPVIARRLDAVAA SDFVVALYNPKSGRRTQQIVQAQQLFLRHRRPDTPVAVVKSAYRRRERIEFTTLDKMSDCDIGMLTTVLIGNSHTFVRHG LMVTPRGYANKYELHGDGSTREGERPGRSLSTGLLGWMENLRIDHAEGASVAALALRHKLPADYIEAVLTAPIEEEAVKE ETASAEESEA
Specific function: Methyltransferase that catalyzes the methylation of C-17 in cobalt-precorrin-3B to form cobalt-precorrin-4 [H]
COG id: COG1010
COG function: function code H; Precorrin-3B methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789768, Length=270, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR014776 - InterPro: IPR006363 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: 2.1.1.107; 1.3.1.76; 4.99.1.4 [C]
Molecular weight: Translated: 35726; Mature: 35595
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPKGKIMLVGIGPGSHDHMTQRARAAIAEADVVVGYVTYIKLVADLLEGKEVVRKGMT CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH EELDRAVHALASAREGKKVALISSGDAGVYGMAGPTYEVLFQAGWTPESDVQVEVVPGAS HHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCHHHHHEECCCCCCCCCEEEEECCCH AINACAALVGAPLTHDFCSISLSDLLTPWPVIARRLDAVAASDFVVALYNPKSGRRTQQI HHHHHHHHHCCCCCHHHHHCCHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHH VQAQQLFLRHRRPDTPVAVVKSAYRRRERIEFTTLDKMSDCDIGMLTTVLIGNSHTFVRH HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHCCCCCHHHHC GLMVTPRGYANKYELHGDGSTREGERPGRSLSTGLLGWMENLRIDHAEGASVAALALRHK CEEECCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC LPADYIEAVLTAPIEEEAVKEETASAEESEA CCHHHHHHHHHCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure TGPKGKIMLVGIGPGSHDHMTQRARAAIAEADVVVGYVTYIKLVADLLEGKEVVRKGMT CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH EELDRAVHALASAREGKKVALISSGDAGVYGMAGPTYEVLFQAGWTPESDVQVEVVPGAS HHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCHHHHHEECCCCCCCCCEEEEECCCH AINACAALVGAPLTHDFCSISLSDLLTPWPVIARRLDAVAASDFVVALYNPKSGRRTQQI HHHHHHHHHCCCCCHHHHHCCHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHH VQAQQLFLRHRRPDTPVAVVKSAYRRRERIEFTTLDKMSDCDIGMLTTVLIGNSHTFVRH HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHCCCCCHHHHC GLMVTPRGYANKYELHGDGSTREGERPGRSLSTGLLGWMENLRIDHAEGASVAALALRHK CEEECCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC LPADYIEAVLTAPIEEEAVKEETASAEESEA CCHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2S-Adenosyl-L-methionine; uroporphyrin III; dihydrosirohydrochlorin; NAD; sirohydrochlorin; Fe (II) [C]
Specific reaction: 2S-Adenosyl-L-methionine + uroporphyrin III = 2S-adenosyl-L-homocysteine + precorrin dihydrosirohydrochlorin + NAD = sirohydrochlorin + NADH sirohydrochlorin + Fe (II) = 2 Proton + siroheme [C]
General reaction: Methyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501034; 11677609 [H]