| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788488
Identifier: 91788488
GI number: 91788488
Start: 2760716
End: 2761372
Strand: Reverse
Name: 91788488
Synonym: Bpro_2626
Alternate gene names: NA
Gene position: 2761372-2760716 (Counterclockwise)
Preceding gene: 91788489
Following gene: 91788487
Centisome position: 53.1
GC content: 59.51
Gene sequence:
>657_bases ATGAACAAGACACAAAAAAAAGTAGCCCTGCTGGCAGTCGGCACCGCTTTGACCGTGCTGCTGGCCGGTTGCGCGATGGC GCCCACGTCGCAGGCGGTTGATGAAGCCACCGCCCAAGTGCTGAAGGGCTCGTTCCGCGAACAGGGTATTGCCAGGCTGG ACCGGCTCAAGCTCGATGCCTCCAACCAGGCCTGTTCGGAGGCTGCGGGGAAGCCGCTCGATGAAAAACTGGCCAAAGCC ATTGAAGAGGCCAACCTGAAAACGGTGAAGTTTCCCTTGGATGGCAAATTTATCGGCAACTGGCGCGAAGGCGAAAAAAT TGCCCAGAACGGGCGCGGCCTGACCTGGAGCGACAAGCCCGGTGAAGCCAACGGTGGCAGCTGCTACAACTGCCATCAGA TCAGCAAGGCGGAACTGTCTTTTGGCTCGATAGGCCCCAGCCTTTACAACTACGGCAAGCTGCGCGGCGTGAGTGACCCG GCCGCTGCTGCCAGCAAACCCATTGTTGAGTACACCTGGGGAAAACTCTGGAACGCCAAGGCCTACAACGCCTGCTCCGG CATGCCCCGGTTTGGCCATGCGGCCATCCTGGGTGAGCAGCAGATTCGCGACGTGATGGCGCTGCTGCTGGATCCGCAAT CGCCGGTCAATAAATAA
Upstream 100 bases:
>100_bases GACGCGACCATTGCGCTGGGCGTGTACATGGGTGTGAACAGCAAGGGCGGTGCCTCCACCGCTCCTGCGCTCAAGCGTTA AACCGGGCAGAAGGATTGAC
Downstream 100 bases:
>100_bases TCAACGGCGATTCTGGCTGTCTGCCCGGGAAATAGGGGCGCAAACAGCTCAAATTGATAGTAGTTTCAACCCACACCCGG CTTGCCGGGCAGGATGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MNKTQKKVALLAVGTALTVLLAGCAMAPTSQAVDEATAQVLKGSFREQGIARLDRLKLDASNQACSEAAGKPLDEKLAKA IEEANLKTVKFPLDGKFIGNWREGEKIAQNGRGLTWSDKPGEANGGSCYNCHQISKAELSFGSIGPSLYNYGKLRGVSDP AAAASKPIVEYTWGKLWNAKAYNACSGMPRFGHAAILGEQQIRDVMALLLDPQSPVNK
Sequences:
>Translated_218_residues MNKTQKKVALLAVGTALTVLLAGCAMAPTSQAVDEATAQVLKGSFREQGIARLDRLKLDASNQACSEAAGKPLDEKLAKA IEEANLKTVKFPLDGKFIGNWREGEKIAQNGRGLTWSDKPGEANGGSCYNCHQISKAELSFGSIGPSLYNYGKLRGVSDP AAAASKPIVEYTWGKLWNAKAYNACSGMPRFGHAAILGEQQIRDVMALLLDPQSPVNK >Mature_218_residues MNKTQKKVALLAVGTALTVLLAGCAMAPTSQAVDEATAQVLKGSFREQGIARLDRLKLDASNQACSEAAGKPLDEKLAKA IEEANLKTVKFPLDGKFIGNWREGEKIAQNGRGLTWSDKPGEANGGSCYNCHQISKAELSFGSIGPSLYNYGKLRGVSDP AAAASKPIVEYTWGKLWNAKAYNACSGMPRFGHAAILGEQQIRDVMALLLDPQSPVNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR016823 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23265; Mature: 23265
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTQKKVALLAVGTALTVLLAGCAMAPTSQAVDEATAQVLKGSFREQGIARLDRLKLDA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SNQACSEAAGKPLDEKLAKAIEEANLKTVKFPLDGKFIGNWREGEKIAQNGRGLTWSDKP CHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCEECCCCCHHHHHHCCCCCCCCCCC GEANGGSCYNCHQISKAELSFGSIGPSLYNYGKLRGVSDPAAAASKPIVEYTWGKLWNAK CCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCHHHHHCHHCCCC AYNACSGMPRFGHAAILGEQQIRDVMALLLDPQSPVNK HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNKTQKKVALLAVGTALTVLLAGCAMAPTSQAVDEATAQVLKGSFREQGIARLDRLKLDA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SNQACSEAAGKPLDEKLAKAIEEANLKTVKFPLDGKFIGNWREGEKIAQNGRGLTWSDKP CHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCEECCCCCHHHHHHCCCCCCCCCCC GEANGGSCYNCHQISKAELSFGSIGPSLYNYGKLRGVSDPAAAASKPIVEYTWGKLWNAK CCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCHHHHHCHHCCCC AYNACSGMPRFGHAAILGEQQIRDVMALLLDPQSPVNK HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]