Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788488

Identifier: 91788488

GI number: 91788488

Start: 2760716

End: 2761372

Strand: Reverse

Name: 91788488

Synonym: Bpro_2626

Alternate gene names: NA

Gene position: 2761372-2760716 (Counterclockwise)

Preceding gene: 91788489

Following gene: 91788487

Centisome position: 53.1

GC content: 59.51

Gene sequence:

>657_bases
ATGAACAAGACACAAAAAAAAGTAGCCCTGCTGGCAGTCGGCACCGCTTTGACCGTGCTGCTGGCCGGTTGCGCGATGGC
GCCCACGTCGCAGGCGGTTGATGAAGCCACCGCCCAAGTGCTGAAGGGCTCGTTCCGCGAACAGGGTATTGCCAGGCTGG
ACCGGCTCAAGCTCGATGCCTCCAACCAGGCCTGTTCGGAGGCTGCGGGGAAGCCGCTCGATGAAAAACTGGCCAAAGCC
ATTGAAGAGGCCAACCTGAAAACGGTGAAGTTTCCCTTGGATGGCAAATTTATCGGCAACTGGCGCGAAGGCGAAAAAAT
TGCCCAGAACGGGCGCGGCCTGACCTGGAGCGACAAGCCCGGTGAAGCCAACGGTGGCAGCTGCTACAACTGCCATCAGA
TCAGCAAGGCGGAACTGTCTTTTGGCTCGATAGGCCCCAGCCTTTACAACTACGGCAAGCTGCGCGGCGTGAGTGACCCG
GCCGCTGCTGCCAGCAAACCCATTGTTGAGTACACCTGGGGAAAACTCTGGAACGCCAAGGCCTACAACGCCTGCTCCGG
CATGCCCCGGTTTGGCCATGCGGCCATCCTGGGTGAGCAGCAGATTCGCGACGTGATGGCGCTGCTGCTGGATCCGCAAT
CGCCGGTCAATAAATAA

Upstream 100 bases:

>100_bases
GACGCGACCATTGCGCTGGGCGTGTACATGGGTGTGAACAGCAAGGGCGGTGCCTCCACCGCTCCTGCGCTCAAGCGTTA
AACCGGGCAGAAGGATTGAC

Downstream 100 bases:

>100_bases
TCAACGGCGATTCTGGCTGTCTGCCCGGGAAATAGGGGCGCAAACAGCTCAAATTGATAGTAGTTTCAACCCACACCCGG
CTTGCCGGGCAGGATGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNKTQKKVALLAVGTALTVLLAGCAMAPTSQAVDEATAQVLKGSFREQGIARLDRLKLDASNQACSEAAGKPLDEKLAKA
IEEANLKTVKFPLDGKFIGNWREGEKIAQNGRGLTWSDKPGEANGGSCYNCHQISKAELSFGSIGPSLYNYGKLRGVSDP
AAAASKPIVEYTWGKLWNAKAYNACSGMPRFGHAAILGEQQIRDVMALLLDPQSPVNK

Sequences:

>Translated_218_residues
MNKTQKKVALLAVGTALTVLLAGCAMAPTSQAVDEATAQVLKGSFREQGIARLDRLKLDASNQACSEAAGKPLDEKLAKA
IEEANLKTVKFPLDGKFIGNWREGEKIAQNGRGLTWSDKPGEANGGSCYNCHQISKAELSFGSIGPSLYNYGKLRGVSDP
AAAASKPIVEYTWGKLWNAKAYNACSGMPRFGHAAILGEQQIRDVMALLLDPQSPVNK
>Mature_218_residues
MNKTQKKVALLAVGTALTVLLAGCAMAPTSQAVDEATAQVLKGSFREQGIARLDRLKLDASNQACSEAAGKPLDEKLAKA
IEEANLKTVKFPLDGKFIGNWREGEKIAQNGRGLTWSDKPGEANGGSCYNCHQISKAELSFGSIGPSLYNYGKLRGVSDP
AAAASKPIVEYTWGKLWNAKAYNACSGMPRFGHAAILGEQQIRDVMALLLDPQSPVNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR016823 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23265; Mature: 23265

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTQKKVALLAVGTALTVLLAGCAMAPTSQAVDEATAQVLKGSFREQGIARLDRLKLDA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SNQACSEAAGKPLDEKLAKAIEEANLKTVKFPLDGKFIGNWREGEKIAQNGRGLTWSDKP
CHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCEECCCCCHHHHHHCCCCCCCCCCC
GEANGGSCYNCHQISKAELSFGSIGPSLYNYGKLRGVSDPAAAASKPIVEYTWGKLWNAK
CCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCHHHHHCHHCCCC
AYNACSGMPRFGHAAILGEQQIRDVMALLLDPQSPVNK
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNKTQKKVALLAVGTALTVLLAGCAMAPTSQAVDEATAQVLKGSFREQGIARLDRLKLDA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SNQACSEAAGKPLDEKLAKAIEEANLKTVKFPLDGKFIGNWREGEKIAQNGRGLTWSDKP
CHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCEECCCCCHHHHHHCCCCCCCCCCC
GEANGGSCYNCHQISKAELSFGSIGPSLYNYGKLRGVSDPAAAASKPIVEYTWGKLWNAK
CCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCHHHHHCHHCCCC
AYNACSGMPRFGHAAILGEQQIRDVMALLLDPQSPVNK
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]