| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788489
Identifier: 91788489
GI number: 91788489
Start: 2761392
End: 2762207
Strand: Reverse
Name: 91788489
Synonym: Bpro_2627
Alternate gene names: NA
Gene position: 2762207-2761392 (Counterclockwise)
Preceding gene: 91788490
Following gene: 91788488
Centisome position: 53.12
GC content: 61.52
Gene sequence:
>816_bases ATGAAATCAAGCCTGTACGGGCCTGCGGCACTGGCGGCACTTACGGCACTGGCGCTGTTCCCGTTGTCCGCCGCCGCGCA GAAAAGCACCGCCGAGGGCATCGCCGAGTACCGTGCGATGCTGGCCGATGGCAACCCGGCCGAGCTGTATGAGGCCAAGG GTGAGCTGATCTGGAAACAGGCGCGCGGCCCGAAGAATGCTTCGCTCGAAAAATGCGACCTGGGCAAAGGCCCCGGCGTG GTGAAGGGCACTTTTGTCGAGTTGCCGCGCTTTTTTGCGGACACCCGGCGCGTGCAGGACCTGGAGTCGCGCCTGCTCAC CTGTATGGAGCAACTGCAGGGTTTCAATGCGGCTGACATCGCCAAAACCAGCTTTGGTACAGGCGAGCAAAAGACCATTG AGTCGCTGGTGGCCTATATTTCGGGCGAATCGCGCGGCATGAGCTTCAACCTGCCGCAGGCCCATGCGCAGGAAAAGCTG ATGTATGAAGTTGGCAAGAAGGTGTTCTACCTGCGCGGCGGCCCCTATGACTTTTCGTGTGCGTCTTGCCATGGGGAGGA CAACAAGCGTGTGCGTCTGCAGGACCTTCCCAACCTGACCAAAGAACCTGGCGCCAGCACCGGTTTTGGCGCGTGGCCGG CCTACCGTGTTTCCAGCGGCGATTTGTGGAGCATGCAGCGCCGCCTGAATGACTGCTATCGGCAGCAGCGCTTTCCGTTC CCGGGCTATGCCTCCGACGCGACCATTGCGCTGGGCGTGTACATGGGTGTGAACAGCAAGGGCGGTGCCTCCACCGCTCC TGCGCTCAAGCGTTAA
Upstream 100 bases:
>100_bases AAGGGCAGCATCTGCATCGCGCCGGCGTCGCACCAGCTTCAGCGGTGCGACCTCACAATAACGAAGACGGTTGATAACGA AAACGGTTGAGGAGACCACG
Downstream 100 bases:
>100_bases ACCGGGCAGAAGGATTGACATGAACAAGACACAAAAAAAAGTAGCCCTGCTGGCAGTCGGCACCGCTTTGACCGTGCTGC TGGCCGGTTGCGCGATGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKSSLYGPAALAALTALALFPLSAAAQKSTAEGIAEYRAMLADGNPAELYEAKGELIWKQARGPKNASLEKCDLGKGPGV VKGTFVELPRFFADTRRVQDLESRLLTCMEQLQGFNAADIAKTSFGTGEQKTIESLVAYISGESRGMSFNLPQAHAQEKL MYEVGKKVFYLRGGPYDFSCASCHGEDNKRVRLQDLPNLTKEPGASTGFGAWPAYRVSSGDLWSMQRRLNDCYRQQRFPF PGYASDATIALGVYMGVNSKGGASTAPALKR
Sequences:
>Translated_271_residues MKSSLYGPAALAALTALALFPLSAAAQKSTAEGIAEYRAMLADGNPAELYEAKGELIWKQARGPKNASLEKCDLGKGPGV VKGTFVELPRFFADTRRVQDLESRLLTCMEQLQGFNAADIAKTSFGTGEQKTIESLVAYISGESRGMSFNLPQAHAQEKL MYEVGKKVFYLRGGPYDFSCASCHGEDNKRVRLQDLPNLTKEPGASTGFGAWPAYRVSSGDLWSMQRRLNDCYRQQRFPF PGYASDATIALGVYMGVNSKGGASTAPALKR >Mature_271_residues MKSSLYGPAALAALTALALFPLSAAAQKSTAEGIAEYRAMLADGNPAELYEAKGELIWKQARGPKNASLEKCDLGKGPGV VKGTFVELPRFFADTRRVQDLESRLLTCMEQLQGFNAADIAKTSFGTGEQKTIESLVAYISGESRGMSFNLPQAHAQEKL MYEVGKKVFYLRGGPYDFSCASCHGEDNKRVRLQDLPNLTKEPGASTGFGAWPAYRVSSGDLWSMQRRLNDCYRQQRFPF PGYASDATIALGVYMGVNSKGGASTAPALKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29403; Mature: 29403
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSLYGPAALAALTALALFPLSAAAQKSTAEGIAEYRAMLADGNPAELYEAKGELIWKQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEHH ARGPKNASLEKCDLGKGPGVVKGTFVELPRFFADTRRVQDLESRLLTCMEQLQGFNAADI CCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AKTSFGTGEQKTIESLVAYISGESRGMSFNLPQAHAQEKLMYEVGKKVFYLRGGPYDFSC HHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCC ASCHGEDNKRVRLQDLPNLTKEPGASTGFGAWPAYRVSSGDLWSMQRRLNDCYRQQRFPF CCCCCCCCCEEEHHCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCC PGYASDATIALGVYMGVNSKGGASTAPALKR CCCCCCCEEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MKSSLYGPAALAALTALALFPLSAAAQKSTAEGIAEYRAMLADGNPAELYEAKGELIWKQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEHH ARGPKNASLEKCDLGKGPGVVKGTFVELPRFFADTRRVQDLESRLLTCMEQLQGFNAADI CCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AKTSFGTGEQKTIESLVAYISGESRGMSFNLPQAHAQEKLMYEVGKKVFYLRGGPYDFSC HHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCC ASCHGEDNKRVRLQDLPNLTKEPGASTGFGAWPAYRVSSGDLWSMQRRLNDCYRQQRFPF CCCCCCCCCEEEHHCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCC PGYASDATIALGVYMGVNSKGGASTAPALKR CCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA