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The map label for this gene is ydiU [C]

Identifier: 91788443

GI number: 91788443

Start: 2703324

End: 2704814

Strand: Direct

Name: ydiU [C]

Synonym: Bpro_2581

Alternate gene names: 91788443

Gene position: 2703324-2704814 (Clockwise)

Preceding gene: 91788442

Following gene: 91788444

Centisome position: 51.98

GC content: 61.9

Gene sequence:

>1491_bases
ATGACCGCTGCCCCAGACACCCCATCCGACCCGCTGGACCTTGCCGAACCGGGCCTGAAGTGGGGCAACAGTTTTGCCCG
GCTGGGCCCTGGTTTTTACACCGAACTTCAACCCACTCCCCTGCCTTCGCCGTACTGGGTAGGCCGCAGCCAGGCGCTCG
CCCGTGAACTGGGGCTGGAAGACCACTGGCTGGAATCTGCCGAGGCGCTTGAGGTGCTGACCGGCAACCGCAGCACGGCG
GGATCCCGCCCCTTGGCCAGCGTGTACAGCGGCCACCAGTTTGGCGTGTGGGCCGGGCAATTGGGCGACGGACGGGCCAT
CCTGCTGGGCGATCTCCAGACGCCTGCGGGCCCCCAGGAAATCCAGCTCAAGGGTGCGGGCCGCACGCCCTACTCGCGCA
TGGGCGATGGCCGGGCCGTGCTGCGCAGTTCGATCCGCGAGTTCCTGGCTTCTGAAGCCATGCATGGCCTGGGCATACCC
ACCACGCGCGCCCTCTGCGTGACCGGTTCGGATGCGCCGGTGCGCCGCGAAGACATCGAGACGGCTGCCGTGGTGACGCG
GACTTCGCCCAGTTTCATCCGCTTTGGCCATTTCGAGCACTTCAGCTACAGCAACCAGCATGACCGGCTCAAGACATTGG
CCGATTACGTCATTGACGGGTTTTATCCGGCATGCCGCGAAGCAAAGCAGCCTTATGCCGCGTTGCTTGAAGCGGCCAGT
GAGCGCACCGCGCGCCTGATGGCCGCATGGCAGGCAATCGGCTTTTGCCATGGCGTGATGAACACCGACAACATGAGCAT
TCTGGGCCTGACCATCGATTACGGCCCCTTCCAGTTTCTTGACGCGTTCGACCCCGGCCACATCTGCAACCACTCCGACC
CCCAGGGCCGCTACGCCTACAACAAGCAGCCCAACATCGCTTACTGGAACCTGTTTTGCCTGGGCCAGGCCTTGCTGCCG
CTGATTGAGGATCAGGAGCAGGCGCTGGCAGCCCTCGAATCCTACAAAACCGTGTTTCCCCAAGCCCTGGAAGCCCGGAT
GCGCGACAAGCTCGGCCTTGTCGAGACGCAGGCCGGTGACCGGGAGTTGATCGAGAGCACCTTCAAGCTGCTGGCCAGCA
ACAAGGTGGACTACACGATTTTCTGGCGCCGTTTATGCGGCTTTACCCCGCAAAGCGGCCACGAATCCGTGCGGGACCTG
TTTTTTGACCGCGAATCCTTCAACGCCTGGGCCCTACAGTATTCAGAGCGGGTAGCCGGCGTGGATCAAGGGGTGCGGGC
CAATTTGATGCTGAAAAGCAACCCCAAGTTCGTGCTGCGCAACCATTTGGGCGAGGAAGCCATCCGCGCGGCGAAACTAA
AAGACTTTTCCGGTGTCAACACCTTGCTCGGCTTGCTCCAGGCCCCATTTGATGAACACCCGGGCCATGACAGCTTTTCC
GATTTTCCGCCGGACTGGGCTTCATCCATTGAAATAAGTTGCAGTTCGTAA

Upstream 100 bases:

>100_bases
CTGGACGAGCAGGCGCTCGCGTCCTGCGCCGCCCGGCCAGCGACAGACACGGTTTAACCCCGGCTGTGCAGGGCTGCTGG
CGTGATAAGACAATAGGGTC

Downstream 100 bases:

>100_bases
CACCCTTAACTCAGGATACCCATGAGCACCAAAATCCAGAAAACAGACGCCGAATGGAAGGCCTTGCTGGCGGAAAAAGG
CGCCGAGCCGGTTGCCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MTAAPDTPSDPLDLAEPGLKWGNSFARLGPGFYTELQPTPLPSPYWVGRSQALARELGLEDHWLESAEALEVLTGNRSTA
GSRPLASVYSGHQFGVWAGQLGDGRAILLGDLQTPAGPQEIQLKGAGRTPYSRMGDGRAVLRSSIREFLASEAMHGLGIP
TTRALCVTGSDAPVRREDIETAAVVTRTSPSFIRFGHFEHFSYSNQHDRLKTLADYVIDGFYPACREAKQPYAALLEAAS
ERTARLMAAWQAIGFCHGVMNTDNMSILGLTIDYGPFQFLDAFDPGHICNHSDPQGRYAYNKQPNIAYWNLFCLGQALLP
LIEDQEQALAALESYKTVFPQALEARMRDKLGLVETQAGDRELIESTFKLLASNKVDYTIFWRRLCGFTPQSGHESVRDL
FFDRESFNAWALQYSERVAGVDQGVRANLMLKSNPKFVLRNHLGEEAIRAAKLKDFSGVNTLLGLLQAPFDEHPGHDSFS
DFPPDWASSIEISCSS

Sequences:

>Translated_496_residues
MTAAPDTPSDPLDLAEPGLKWGNSFARLGPGFYTELQPTPLPSPYWVGRSQALARELGLEDHWLESAEALEVLTGNRSTA
GSRPLASVYSGHQFGVWAGQLGDGRAILLGDLQTPAGPQEIQLKGAGRTPYSRMGDGRAVLRSSIREFLASEAMHGLGIP
TTRALCVTGSDAPVRREDIETAAVVTRTSPSFIRFGHFEHFSYSNQHDRLKTLADYVIDGFYPACREAKQPYAALLEAAS
ERTARLMAAWQAIGFCHGVMNTDNMSILGLTIDYGPFQFLDAFDPGHICNHSDPQGRYAYNKQPNIAYWNLFCLGQALLP
LIEDQEQALAALESYKTVFPQALEARMRDKLGLVETQAGDRELIESTFKLLASNKVDYTIFWRRLCGFTPQSGHESVRDL
FFDRESFNAWALQYSERVAGVDQGVRANLMLKSNPKFVLRNHLGEEAIRAAKLKDFSGVNTLLGLLQAPFDEHPGHDSFS
DFPPDWASSIEISCSS
>Mature_495_residues
TAAPDTPSDPLDLAEPGLKWGNSFARLGPGFYTELQPTPLPSPYWVGRSQALARELGLEDHWLESAEALEVLTGNRSTAG
SRPLASVYSGHQFGVWAGQLGDGRAILLGDLQTPAGPQEIQLKGAGRTPYSRMGDGRAVLRSSIREFLASEAMHGLGIPT
TRALCVTGSDAPVRREDIETAAVVTRTSPSFIRFGHFEHFSYSNQHDRLKTLADYVIDGFYPACREAKQPYAALLEAASE
RTARLMAAWQAIGFCHGVMNTDNMSILGLTIDYGPFQFLDAFDPGHICNHSDPQGRYAYNKQPNIAYWNLFCLGQALLPL
IEDQEQALAALESYKTVFPQALEARMRDKLGLVETQAGDRELIESTFKLLASNKVDYTIFWRRLCGFTPQSGHESVRDLF
FDRESFNAWALQYSERVAGVDQGVRANLMLKSNPKFVLRNHLGEEAIRAAKLKDFSGVNTLLGLLQAPFDEHPGHDSFSD
FPPDWASSIEISCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family

Homologues:

Organism=Homo sapiens, GI32880229, Length=383, Percent_Identity=45.6919060052219, Blast_Score=291, Evalue=1e-78,
Organism=Escherichia coli, GI1787999, Length=470, Percent_Identity=46.5957446808511, Blast_Score=404, Evalue=1e-114,
Organism=Saccharomyces cerevisiae, GI6325034, Length=334, Percent_Identity=38.9221556886228, Blast_Score=205, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2581_POLSJ (Q12AE5)

Other databases:

- EMBL:   CP000316
- RefSeq:   YP_549395.1
- STRING:   Q12AE5
- GeneID:   4014769
- GenomeReviews:   CP000316_GR
- KEGG:   pol:Bpro_2581
- NMPDR:   fig|296591.1.peg.294
- eggNOG:   COG0397
- HOGENOM:   HBG683993
- OMA:   FGSYNPR
- PhylomeDB:   Q12AE5
- ProtClustDB:   CLSK951503
- BioCyc:   PSP296591:BPRO_2581-MONOMER
- HAMAP:   MF_00692
- InterPro:   IPR003846

Pfam domain/function: PF02696 UPF0061

EC number: NA

Molecular weight: Translated: 54769; Mature: 54638

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAPDTPSDPLDLAEPGLKWGNSFARLGPGFYTELQPTPLPSPYWVGRSQALARELGLE
CCCCCCCCCCCCCHHCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
DHWLESAEALEVLTGNRSTAGSRPLASVYSGHQFGVWAGQLGDGRAILLGDLQTPAGPQE
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCEEEEECCCCCCCCCE
IQLKGAGRTPYSRMGDGRAVLRSSIREFLASEAMHGLGIPTTRALCVTGSDAPVRREDIE
EEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHCC
TAAVVTRTSPSFIRFGHFEHFSYSNQHDRLKTLADYVIDGFYPACREAKQPYAALLEAAS
CEEEEEECCCCCEEECCCHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHH
ERTARLMAAWQAIGFCHGVMNTDNMSILGLTIDYGPFQFLDAFDPGHICNHSDPQGRYAY
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCC
NKQPNIAYWNLFCLGQALLPLIEDQEQALAALESYKTVFPQALEARMRDKLGLVETQAGD
CCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
RELIESTFKLLASNKVDYTIFWRRLCGFTPQSGHESVRDLFFDRESFNAWALQYSERVAG
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHC
VDQGVRANLMLKSNPKFVLRNHLGEEAIRAAKLKDFSGVNTLLGLLQAPFDEHPGHDSFS
CCCCCEEEEEEECCCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCC
DFPPDWASSIEISCSS
CCCCCCCCCEEEEECC
>Mature Secondary Structure 
TAAPDTPSDPLDLAEPGLKWGNSFARLGPGFYTELQPTPLPSPYWVGRSQALARELGLE
CCCCCCCCCCCCHHCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
DHWLESAEALEVLTGNRSTAGSRPLASVYSGHQFGVWAGQLGDGRAILLGDLQTPAGPQE
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCEEEEECCCCCCCCCE
IQLKGAGRTPYSRMGDGRAVLRSSIREFLASEAMHGLGIPTTRALCVTGSDAPVRREDIE
EEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHCC
TAAVVTRTSPSFIRFGHFEHFSYSNQHDRLKTLADYVIDGFYPACREAKQPYAALLEAAS
CEEEEEECCCCCEEECCCHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHH
ERTARLMAAWQAIGFCHGVMNTDNMSILGLTIDYGPFQFLDAFDPGHICNHSDPQGRYAY
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCC
NKQPNIAYWNLFCLGQALLPLIEDQEQALAALESYKTVFPQALEARMRDKLGLVETQAGD
CCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
RELIESTFKLLASNKVDYTIFWRRLCGFTPQSGHESVRDLFFDRESFNAWALQYSERVAG
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHC
VDQGVRANLMLKSNPKFVLRNHLGEEAIRAAKLKDFSGVNTLLGLLQAPFDEHPGHDSFS
CCCCCEEEEEEECCCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCC
DFPPDWASSIEISCSS
CCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA