Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is msrB [H]

Identifier: 91788444

GI number: 91788444

Start: 2704836

End: 2705246

Strand: Direct

Name: msrB [H]

Synonym: Bpro_2582

Alternate gene names: 91788444

Gene position: 2704836-2705246 (Clockwise)

Preceding gene: 91788443

Following gene: 91788445

Centisome position: 52.01

GC content: 58.64

Gene sequence:

>411_bases
ATGAGCACCAAAATCCAGAAAACAGACGCCGAATGGAAGGCCTTGCTGGCGGAAAAAGGCGCCGAGCCGGTTGCCTTCGA
GGTCACTCGCCACGCCGCCACCGAGCGCCCTTTTACCGGGAAGTATGAGGACAACTATGCGCAGGGAACCTACCGCTGCA
TTTGCTGTGACGCCGAGCTTTTTGACTCGTCCAGCAAGTTTGACGCAGGTTGCGGATGGCCCAGTTTCTCCCAGGAATTA
AACAAGGGCGCCATTGAAGAGCATGTGGACCGCGCGCACGGCATGACGCGCACCGAAACCGTCTGTGCGAACTGCGGCGC
ACATCTGGGCCATGTGTTTCCCGACGGTCCCACCCCGACCGGCTTGCGCTACTGCATGAACTCCGCGTCACTGGACTTTA
AGCCAAAGTAA

Upstream 100 bases:

>100_bases
TGAACACCCGGGCCATGACAGCTTTTCCGATTTTCCGCCGGACTGGGCTTCATCCATTGAAATAAGTTGCAGTTCGTAAC
ACCCTTAACTCAGGATACCC

Downstream 100 bases:

>100_bases
TGGGCCCCCACGGTCGCTCACTGCGTGTAGCTCCCTGCCCCCCGAAGGGGCCGCTGCGCCTGCGGCCCGGCAGAGCCGGT
TCCGCGGCCCTGGCTTGGAT

Product: protein-methionine-S-oxide reductase

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSTKIQKTDAEWKALLAEKGAEPVAFEVTRHAATERPFTGKYEDNYAQGTYRCICCDAELFDSSSKFDAGCGWPSFSQEL
NKGAIEEHVDRAHGMTRTETVCANCGAHLGHVFPDGPTPTGLRYCMNSASLDFKPK

Sequences:

>Translated_136_residues
MSTKIQKTDAEWKALLAEKGAEPVAFEVTRHAATERPFTGKYEDNYAQGTYRCICCDAELFDSSSKFDAGCGWPSFSQEL
NKGAIEEHVDRAHGMTRTETVCANCGAHLGHVFPDGPTPTGLRYCMNSASLDFKPK
>Mature_135_residues
STKIQKTDAEWKALLAEKGAEPVAFEVTRHAATERPFTGKYEDNYAQGTYRCICCDAELFDSSSKFDAGCGWPSFSQELN
KGAIEEHVDRAHGMTRTETVCANCGAHLGHVFPDGPTPTGLRYCMNSASLDFKPK

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI117606353, Length=134, Percent_Identity=47.7611940298507, Blast_Score=126, Evalue=4e-30,
Organism=Homo sapiens, GI301336164, Length=113, Percent_Identity=50.4424778761062, Blast_Score=126, Evalue=5e-30,
Organism=Homo sapiens, GI301336162, Length=113, Percent_Identity=50.4424778761062, Blast_Score=126, Evalue=5e-30,
Organism=Homo sapiens, GI73089054, Length=113, Percent_Identity=50.4424778761062, Blast_Score=126, Evalue=5e-30,
Organism=Homo sapiens, GI37620216, Length=113, Percent_Identity=50.4424778761062, Blast_Score=126, Evalue=5e-30,
Organism=Escherichia coli, GI1788077, Length=116, Percent_Identity=53.448275862069, Blast_Score=135, Evalue=9e-34,
Organism=Caenorhabditis elegans, GI17553450, Length=128, Percent_Identity=49.21875, Blast_Score=129, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI115532676, Length=128, Percent_Identity=49.21875, Blast_Score=128, Evalue=7e-31,
Organism=Saccharomyces cerevisiae, GI6319816, Length=135, Percent_Identity=42.2222222222222, Blast_Score=106, Evalue=9e-25,
Organism=Drosophila melanogaster, GI221378664, Length=134, Percent_Identity=48.5074626865672, Blast_Score=139, Evalue=6e-34,
Organism=Drosophila melanogaster, GI221378662, Length=141, Percent_Identity=46.0992907801418, Blast_Score=138, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24645799, Length=134, Percent_Identity=48.5074626865672, Blast_Score=136, Evalue=4e-33,
Organism=Drosophila melanogaster, GI45553335, Length=134, Percent_Identity=48.5074626865672, Blast_Score=136, Evalue=4e-33,
Organism=Drosophila melanogaster, GI21356369, Length=134, Percent_Identity=48.5074626865672, Blast_Score=136, Evalue=4e-33,
Organism=Drosophila melanogaster, GI24645801, Length=145, Percent_Identity=46.2068965517241, Blast_Score=133, Evalue=4e-32,
Organism=Drosophila melanogaster, GI24645804, Length=145, Percent_Identity=46.2068965517241, Blast_Score=132, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 14957; Mature: 14826

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKIQKTDAEWKALLAEKGAEPVAFEVTRHAATERPFTGKYEDNYAQGTYRCICCDAEL
CCCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECHHH
FDSSSKFDAGCGWPSFSQELNKGAIEEHVDRAHGMTRTETVCANCGAHLGHVFPDGPTPT
HCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCHHHCCCCCCCCCCH
GLRYCMNSASLDFKPK
HHHHHHCCCCCCCCCC
>Mature Secondary Structure 
STKIQKTDAEWKALLAEKGAEPVAFEVTRHAATERPFTGKYEDNYAQGTYRCICCDAEL
CCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECHHH
FDSSSKFDAGCGWPSFSQELNKGAIEEHVDRAHGMTRTETVCANCGAHLGHVFPDGPTPT
HCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCHHHCCCCCCCCCCH
GLRYCMNSASLDFKPK
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA