| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788442
Identifier: 91788442
GI number: 91788442
Start: 2702585
End: 2703280
Strand: Direct
Name: 91788442
Synonym: Bpro_2580
Alternate gene names: NA
Gene position: 2702585-2703280 (Clockwise)
Preceding gene: 91788420
Following gene: 91788443
Centisome position: 51.97
GC content: 65.52
Gene sequence:
>696_bases ATGCCCTTTGAAGCTGCCCTCGCCCACCACCGCTTCCTCAGCGGTCAGTCCTGGTTTGCCGACCTGCCAGCCGACGCACA GACCCGGCTGCTTGAGCGGACATTCACCATAGCTGGGCACAAAGGTGATGTCCTGCTGGCGGCTGGCGAGCCCGTCAAGG GCTGGTATGCCGTGCTGTCGGGTCTGGTCAAGCTGCAGAGCAAGTCGGCTGAAGGACGGGTGTCGGCCTTCCTGGGTGTG CCTGACGGTGAATGGTTTGGCGAGGGCTCGACACTCAAAACCGAGCCGCGCCGCTACGACGTGATTGCTTTGCGCGACAC CACGCTGCTGTGCCTGCCGCGGACCCAATTCAACGAATTGCTTGCAAGCAGCCTGCCCTTCAACCACTTTCTGGTGGCCC ACCTGAACCGGCGCCTCGGGCAGGCCATGACCATCATCGAGGCAGGCCGCCTGCGCGCCCCGGAGCAGCGCGTGGCCCTG TATTTGAGCCGTGTTTTCTGGCAGGGGCGGCGCAAGCTCCTGCTGTCGCAGGAGGAGCTGGGACACCTCGCCGGACTGTC ACGACAAACCGTCAACCGGGCCCTGCAGACCCTCGAGGCGCAGGGGCTGGTGTCGCTCGAGTTCGGCCGCGTGGCCATAC TGGACGAGCAGGCGCTCGCGTCCTGCGCCGCCCGGCCAGCGACAGACACGGTTTAA
Upstream 100 bases:
>100_bases TCTAGGTACATACCCGGCCTGGCGAACGCACCTGCTACTCGCCATTCAGGCTGCGCCACCGGCGGGCTCCGCACCTCAAG GGTGGTGGACAATCAAAGCC
Downstream 100 bases:
>100_bases CCCCGGCTGTGCAGGGCTGCTGGCGTGATAAGACAATAGGGTCATGACCGCTGCCCCAGACACCCCATCCGACCCGCTGG ACCTTGCCGAACCGGGCCTG
Product: Crp/FNR family transcriptional regulator
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Regulatory Protein; Transcription Regulator Protein; Transcriptional Regulator Anr; Cyclic-Nucleotide-Gated Cation Channel; CNMP Regulatory Protein; HTH Crp Family Transcriptional Regulator; GntR Family Transcriptional Regulator; CAMP-Dependent Transcriptional Regulator; Catabolite Gene Activator; Transcriptional Regulator Crp Family
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MPFEAALAHHRFLSGQSWFADLPADAQTRLLERTFTIAGHKGDVLLAAGEPVKGWYAVLSGLVKLQSKSAEGRVSAFLGV PDGEWFGEGSTLKTEPRRYDVIALRDTTLLCLPRTQFNELLASSLPFNHFLVAHLNRRLGQAMTIIEAGRLRAPEQRVAL YLSRVFWQGRRKLLLSQEELGHLAGLSRQTVNRALQTLEAQGLVSLEFGRVAILDEQALASCAARPATDTV
Sequences:
>Translated_231_residues MPFEAALAHHRFLSGQSWFADLPADAQTRLLERTFTIAGHKGDVLLAAGEPVKGWYAVLSGLVKLQSKSAEGRVSAFLGV PDGEWFGEGSTLKTEPRRYDVIALRDTTLLCLPRTQFNELLASSLPFNHFLVAHLNRRLGQAMTIIEAGRLRAPEQRVAL YLSRVFWQGRRKLLLSQEELGHLAGLSRQTVNRALQTLEAQGLVSLEFGRVAILDEQALASCAARPATDTV >Mature_230_residues PFEAALAHHRFLSGQSWFADLPADAQTRLLERTFTIAGHKGDVLLAAGEPVKGWYAVLSGLVKLQSKSAEGRVSAFLGVP DGEWFGEGSTLKTEPRRYDVIALRDTTLLCLPRTQFNELLASSLPFNHFLVAHLNRRLGQAMTIIEAGRLRAPEQRVALY LSRVFWQGRRKLLLSQEELGHLAGLSRQTVNRALQTLEAQGLVSLEFGRVAILDEQALASCAARPATDTV
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25473; Mature: 25341
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFEAALAHHRFLSGQSWFADLPADAQTRLLERTFTIAGHKGDVLLAAGEPVKGWYAVLS CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEEECCCCCEEEECCCCCHHHHHHHH GLVKLQSKSAEGRVSAFLGVPDGEWFGEGSTLKTEPRRYDVIALRDTTLLCLPRTQFNEL HHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEECCHHHHHH LASSLPFNHFLVAHLNRRLGQAMTIIEAGRLRAPEQRVALYLSRVFWQGRRKLLLSQEEL HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH GHLAGLSRQTVNRALQTLEAQGLVSLEFGRVAILDEQALASCAARPATDTV HHHHCCHHHHHHHHHHHHHHCCEEEEECCEEEEECHHHHHHHHCCCCCCCC >Mature Secondary Structure PFEAALAHHRFLSGQSWFADLPADAQTRLLERTFTIAGHKGDVLLAAGEPVKGWYAVLS CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEEECCCCCEEEECCCCCHHHHHHHH GLVKLQSKSAEGRVSAFLGVPDGEWFGEGSTLKTEPRRYDVIALRDTTLLCLPRTQFNEL HHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEECCHHHHHH LASSLPFNHFLVAHLNRRLGQAMTIIEAGRLRAPEQRVALYLSRVFWQGRRKLLLSQEEL HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH GHLAGLSRQTVNRALQTLEAQGLVSLEFGRVAILDEQALASCAARPATDTV HHHHCCHHHHHHHHHHHHHHCCEEEEECCEEEEECHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA