| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788304
Identifier: 91788304
GI number: 91788304
Start: 2541810
End: 2542352
Strand: Reverse
Name: 91788304
Synonym: Bpro_2439
Alternate gene names: NA
Gene position: 2542352-2541810 (Counterclockwise)
Preceding gene: 91788308
Following gene: 91788301
Centisome position: 48.89
GC content: 61.33
Gene sequence:
>543_bases ATGGACCTCAAACTAGCTTCAAAAACCCTGATTTTGGCGCTCGCCGGCGCATCATTTGCCGTCACGGCGTTTGCCCAATG GCAATGGATCGACAAGGACGGCCGCAAAGTCTTCAGCGACCGCTCGCCGCCAGCCGATATCAAGGAAAAAGATATCCTGA AACGACCTGGTGGCACCCGGATTGCCGCCACCGTGGCGCCTGCGGCCACGGCCGAGGCGGCCGTGTCGCCTGCGGCGGCA GCGTCAGCGTCAGCGGCGGGCAAGGCCGGCGCTCCCAAACTGTCGGGCAAGGATGCTCAGCTGGAGGCCAGGAAAAAGCA GGCGGAAGACGAAGTAGCCGCCAAAAAGAAGGCTGACGAGGAAAAAGTGGCCAAGGCCAAGGCCGAAAACTGCGACCGGG CCAAGCGCGGCCTGCTGACCTTCGAGTCCGGTGTGCGGGTGTCCACCACCAATTCGAAAGGCGAGCGCGAATTCATGGAT GACAATGCGCGCGCTGCTGAAACCAAACGGTTGCGGGATATCACCGCCGCCGATTGCAAATAA
Upstream 100 bases:
>100_bases CTTGGCGCCTATTTTGGCCTGACTTTTTGCCCAAGTTGCAAAAAAGCAGCGTTCCTGGCAAACATGCAGAAACTGCCCCA CACAGCGCTACACTGACCGA
Downstream 100 bases:
>100_bases GACGAGGCTGTCAGCCGGAGCTGGCGTGGCAAACGCATGCGGTCCCCATAAGCCGCCCCTGCGGAGATCACGTCTTTAAT CCTCTCAGTAGCCGGCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MDLKLASKTLILALAGASFAVTAFAQWQWIDKDGRKVFSDRSPPADIKEKDILKRPGGTRIAATVAPAATAEAAVSPAAA ASASAAGKAGAPKLSGKDAQLEARKKQAEDEVAAKKKADEEKVAKAKAENCDRAKRGLLTFESGVRVSTTNSKGEREFMD DNARAAETKRLRDITAADCK
Sequences:
>Translated_180_residues MDLKLASKTLILALAGASFAVTAFAQWQWIDKDGRKVFSDRSPPADIKEKDILKRPGGTRIAATVAPAATAEAAVSPAAA ASASAAGKAGAPKLSGKDAQLEARKKQAEDEVAAKKKADEEKVAKAKAENCDRAKRGLLTFESGVRVSTTNSKGEREFMD DNARAAETKRLRDITAADCK >Mature_180_residues MDLKLASKTLILALAGASFAVTAFAQWQWIDKDGRKVFSDRSPPADIKEKDILKRPGGTRIAATVAPAATAEAAVSPAAA ASASAAGKAGAPKLSGKDAQLEARKKQAEDEVAAKKKADEEKVAKAKAENCDRAKRGLLTFESGVRVSTTNSKGEREFMD DNARAAETKRLRDITAADCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18987; Mature: 18987
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLKLASKTLILALAGASFAVTAFAQWQWIDKDGRKVFSDRSPPADIKEKDILKRPGGTR CCCCCCHHEEEEEECCCCCEEEHHHHEEEECCCCHHHHCCCCCCCCCCHHHHHHCCCCCE IAATVAPAATAEAAVSPAAAASASAAGKAGAPKLSGKDAQLEARKKQAEDEVAAKKKADE EEEEECCCHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCH EKVAKAKAENCDRAKRGLLTFESGVRVSTTNSKGEREFMDDNARAAETKRLRDITAADCK HHHHHHHHHHHHHHHHCCEEECCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDLKLASKTLILALAGASFAVTAFAQWQWIDKDGRKVFSDRSPPADIKEKDILKRPGGTR CCCCCCHHEEEEEECCCCCEEEHHHHEEEECCCCHHHHCCCCCCCCCCHHHHHHCCCCCE IAATVAPAATAEAAVSPAAAASASAAGKAGAPKLSGKDAQLEARKKQAEDEVAAKKKADE EEEEECCCHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCH EKVAKAKAENCDRAKRGLLTFESGVRVSTTNSKGEREFMDDNARAAETKRLRDITAADCK HHHHHHHHHHHHHHHHCCEEECCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA