| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788308
Identifier: 91788308
GI number: 91788308
Start: 2546469
End: 2547305
Strand: Reverse
Name: 91788308
Synonym: Bpro_2443
Alternate gene names: NA
Gene position: 2547305-2546469 (Counterclockwise)
Preceding gene: 91788314
Following gene: 91788304
Centisome position: 48.98
GC content: 64.76
Gene sequence:
>837_bases ATGTTTGAAGCCCCGATGCTTCCAGAAGCGCTTGCTGCGTCCCCTGCAGCACTGTCGGGGGCGATTGCCGTGTTTCTTTT GGCCGGCCTCGTCAAGGGCGTGGTGGGGCTTGGCCTGCCCACGGTGTCCATGGCCTTGTTGGCCTTTGTGTTCAGCCCGG CAGAAGCGGCAGCGCTGCTGATCGTGCCATCACTGGTAACCAATGCATGGCAGCTCCGGCCGCTGGCCGGGCTGGGCCCG GCGCTACGGCGGCTGGGCGGCATGCAGGCCGGTATTTGCGCGGGAACCTGGGCGGGCGCGCTCGCACTGGGCGCACCCGC CGGCGCCTGGGCAATGGTGTCGCTTGGCGTGGTCCTCATCGCCTATGCTTTATGGAGTCTCGCGGGTACCAAGCCCTCGG TGTCGCCAGAGGCAGAAGAATGGCTGGGCCCTCTGATGGGGGTGGTGACCGGGCTGGTCACCGCCGCCACAGGGGTGTTC GTTGTGCCTGCGGTGCCCTACCTGCAAGCGCTGGGGCTGCAGCGCGACGCGTTGATCCAGGCCATGGGTCTGTCCTTTAC CGTTTCCACGCTGGCCCTGGCGGCCGGCCTTTTCTTTAACGCAAGCTATTCAGCACCCCTTGCCGGTGCGTCCGCCCTCT TGCTGCTGCCTGCATTGGCGGGCATGTACCTGGGCCAGAATTTTCGCCGATTGCTGTCACCGTCGCTGTTTCGCGCCTGC TTCCTCGGTAGCCTGATTGTTCTGGGGGCTCACATGATCATGCGAGAGCTGGTGCTGTGGCAAACACCGTCTCCATTGGC GCCTGGACCGCGCCTGGTGGTTGACAGGGAAAAATAG
Upstream 100 bases:
>100_bases CAGGAGCCATCGATGACAACCATGCAGAGCCAGCCTTTTTCCCCAAATCCTTTCCCGCCCTTTCTGCCCAGGCGGGCCGC AGCCCCCATGGCGCCGAGTC
Downstream 100 bases:
>100_bases GAACTCGCCTCGGGGCGCAGCTCCAGTAGAAGAACTGAACCTGGGCTCATCCCTCCGGCAACCGCGAACGTTCCTGCCGC CTGTCAGAGGGGCGGGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MFEAPMLPEALAASPAALSGAIAVFLLAGLVKGVVGLGLPTVSMALLAFVFSPAEAAALLIVPSLVTNAWQLRPLAGLGP ALRRLGGMQAGICAGTWAGALALGAPAGAWAMVSLGVVLIAYALWSLAGTKPSVSPEAEEWLGPLMGVVTGLVTAATGVF VVPAVPYLQALGLQRDALIQAMGLSFTVSTLALAAGLFFNASYSAPLAGASALLLLPALAGMYLGQNFRRLLSPSLFRAC FLGSLIVLGAHMIMRELVLWQTPSPLAPGPRLVVDREK
Sequences:
>Translated_278_residues MFEAPMLPEALAASPAALSGAIAVFLLAGLVKGVVGLGLPTVSMALLAFVFSPAEAAALLIVPSLVTNAWQLRPLAGLGP ALRRLGGMQAGICAGTWAGALALGAPAGAWAMVSLGVVLIAYALWSLAGTKPSVSPEAEEWLGPLMGVVTGLVTAATGVF VVPAVPYLQALGLQRDALIQAMGLSFTVSTLALAAGLFFNASYSAPLAGASALLLLPALAGMYLGQNFRRLLSPSLFRAC FLGSLIVLGAHMIMRELVLWQTPSPLAPGPRLVVDREK >Mature_278_residues MFEAPMLPEALAASPAALSGAIAVFLLAGLVKGVVGLGLPTVSMALLAFVFSPAEAAALLIVPSLVTNAWQLRPLAGLGP ALRRLGGMQAGICAGTWAGALALGAPAGAWAMVSLGVVLIAYALWSLAGTKPSVSPEAEEWLGPLMGVVTGLVTAATGVF VVPAVPYLQALGLQRDALIQAMGLSFTVSTLALAAGLFFNASYSAPLAGASALLLLPALAGMYLGQNFRRLLSPSLFRAC FLGSLIVLGAHMIMRELVLWQTPSPLAPGPRLVVDREK
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28393; Mature: 28393
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEAPMLPEALAASPAALSGAIAVFLLAGLVKGVVGLGLPTVSMALLAFVFSPAEAAALL CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHH IVPSLVTNAWQLRPLAGLGPALRRLGGMQAGICAGTWAGALALGAPAGAWAMVSLGVVLI HHHHHHHCHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AYALWSLAGTKPSVSPEAEEWLGPLMGVVTGLVTAATGVFVVPAVPYLQALGLQRDALIQ HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AMGLSFTVSTLALAAGLFFNASYSAPLAGASALLLLPALAGMYLGQNFRRLLSPSLFRAC HHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH FLGSLIVLGAHMIMRELVLWQTPSPLAPGPRLVVDREK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC >Mature Secondary Structure MFEAPMLPEALAASPAALSGAIAVFLLAGLVKGVVGLGLPTVSMALLAFVFSPAEAAALL CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHH IVPSLVTNAWQLRPLAGLGPALRRLGGMQAGICAGTWAGALALGAPAGAWAMVSLGVVLI HHHHHHHCHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AYALWSLAGTKPSVSPEAEEWLGPLMGVVTGLVTAATGVFVVPAVPYLQALGLQRDALIQ HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AMGLSFTVSTLALAAGLFFNASYSAPLAGASALLLLPALAGMYLGQNFRRLLSPSLFRAC HHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH FLGSLIVLGAHMIMRELVLWQTPSPLAPGPRLVVDREK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA