| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ahpF [C]
Identifier: 91788202
GI number: 91788202
Start: 2431044
End: 2432144
Strand: Reverse
Name: ahpF [C]
Synonym: Bpro_2333
Alternate gene names: 91788202
Gene position: 2432144-2431044 (Counterclockwise)
Preceding gene: 91788203
Following gene: 91788201
Centisome position: 46.77
GC content: 55.22
Gene sequence:
>1101_bases ATGGAACCTCAACTGAATCAAGAAGTGATCAACACCGCAGCACAGCACGATGGGCCGATCGAAACCGATGCGGTCATTGT GGGCGCCGGTCCTGTCGGCCTTTTTCAGGTGTTCGAACTGGGCCTGTTGGAGATCAAGGCCCACGTGATCGATTCCCTCG CCTATCCCGGCGGGCAATGCATTGAGCTCTATCCCGACAAACCGATTTATGACATTCCTGCAGTGCCCATGTGCACAGGC AAAGAGCTGACCGACTCACTGCTCAAGCAGATCGAGCCGTTTGGCGCAACCTTTCACTTTGGACAGGAAGTCAGCGTTGT CGAAAAGCAGGAAGACGGCCGCTTTTTTGTCGAGACGTCCAAAGGCACCAAATTCCTGACCAAAACGATTTTTATTGCGG CCGGCGTGGGCGCTTTCCAGCCCAAGCTGCTGCGTGTCGACGGCCTCGATCAGTTTGACAATACCCAGCTGTTTTATCGC GTCAAAAACCCGGCTGACTTTGCCGGCAAGAATCTGGTGATTGTTGGCGGGGGTGATTCCGCGCTTGACTGGGCTTTGAA CTTTGTGGCTGAAGGCCCCAACAAGGCTGAAAGCGTGATCCTGGTTCACCGCCGTGACGGGTTCAAGGCGGCGCCTGCCA GCGTGGCCAAAATGAAGGAACTCTGCGACGCGTACGAGATGCAGTTCATCGTCGGCCAGGTGACCGGCTACGATGAAAAA AATGGAAAAATGACCGGCGCCAAGGTAACGGGCGCCGATGGCGTGACCCGCGTCGTACCGCTAGATGTGCTGCTGGTATT TTTTGGCCTGAGCCCCAAGCTGGGACCCATTGCCCACTGGGGGCTGGATATCGAGCGCAAGCAGCTCATGGTGGACACTG AAAAGTTTTCAACCAACATTCCTGGCATCTTTGCCGTGGGTGACATCAACACCTACCCCGGCAAGAAAAAACTGATTCTC AGCGGATTTCACGAATGTGCCCTGGCCGCATTCGGTGCCGCTCCCTTTATTTTCCCGGACAAGAAAATCCATCTGCAATA CACAACCACCAGTCCCAAGCTGCACAAGGTGCTGGGTGTCGAATCGCCGGTGTTTGACTGA
Upstream 100 bases:
>100_bases AGACCGGAAAGCTGGACGAACTGGTGCGCTGAAACTCGCGCGCTGCCGGTCCCGCCCGAGCTATTTAGCCCGAGCTATTT AATAAGCAAGTCAAGAAAAA
Downstream 100 bases:
>100_bases ATCCCCTGGTAGATGCCTCCGAAAAAAAGCCCGCCGCGTGCGGGCTTTTTTGTGCCTGTGGATGGTTGCGCGGGACCTGC CTGTCACCGCCCATCGAATT
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: FNR; Fd-NADP+ reductase [H]
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MEPQLNQEVINTAAQHDGPIETDAVIVGAGPVGLFQVFELGLLEIKAHVIDSLAYPGGQCIELYPDKPIYDIPAVPMCTG KELTDSLLKQIEPFGATFHFGQEVSVVEKQEDGRFFVETSKGTKFLTKTIFIAAGVGAFQPKLLRVDGLDQFDNTQLFYR VKNPADFAGKNLVIVGGGDSALDWALNFVAEGPNKAESVILVHRRDGFKAAPASVAKMKELCDAYEMQFIVGQVTGYDEK NGKMTGAKVTGADGVTRVVPLDVLLVFFGLSPKLGPIAHWGLDIERKQLMVDTEKFSTNIPGIFAVGDINTYPGKKKLIL SGFHECALAAFGAAPFIFPDKKIHLQYTTTSPKLHKVLGVESPVFD
Sequences:
>Translated_366_residues MEPQLNQEVINTAAQHDGPIETDAVIVGAGPVGLFQVFELGLLEIKAHVIDSLAYPGGQCIELYPDKPIYDIPAVPMCTG KELTDSLLKQIEPFGATFHFGQEVSVVEKQEDGRFFVETSKGTKFLTKTIFIAAGVGAFQPKLLRVDGLDQFDNTQLFYR VKNPADFAGKNLVIVGGGDSALDWALNFVAEGPNKAESVILVHRRDGFKAAPASVAKMKELCDAYEMQFIVGQVTGYDEK NGKMTGAKVTGADGVTRVVPLDVLLVFFGLSPKLGPIAHWGLDIERKQLMVDTEKFSTNIPGIFAVGDINTYPGKKKLIL SGFHECALAAFGAAPFIFPDKKIHLQYTTTSPKLHKVLGVESPVFD >Mature_366_residues MEPQLNQEVINTAAQHDGPIETDAVIVGAGPVGLFQVFELGLLEIKAHVIDSLAYPGGQCIELYPDKPIYDIPAVPMCTG KELTDSLLKQIEPFGATFHFGQEVSVVEKQEDGRFFVETSKGTKFLTKTIFIAAGVGAFQPKLLRVDGLDQFDNTQLFYR VKNPADFAGKNLVIVGGGDSALDWALNFVAEGPNKAESVILVHRRDGFKAAPASVAKMKELCDAYEMQFIVGQVTGYDEK NGKMTGAKVTGADGVTRVVPLDVLLVFFGLSPKLGPIAHWGLDIERKQLMVDTEKFSTNIPGIFAVGDINTYPGKKKLIL SGFHECALAAFGAAPFIFPDKKIHLQYTTTSPKLHKVLGVESPVFD
Specific function: Serves To Protect The Cell Against DNA Damage By Alkyl Hydroperoxides. It Can Use Either NADH Or NADPH As Electron Donor For Direct Reduction Of Redox Dyes Or Of Alkyl Hydroperoxides When Combined With The Ahpc Protein. [C]
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferredoxin--NADP reductase type 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR022890 - InterPro: IPR000103 [H]
Pfam domain/function: PF07992 Pyr_redox_2 [H]
EC number: =1.18.1.2 [H]
Molecular weight: Translated: 39732; Mature: 39732
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPQLNQEVINTAAQHDGPIETDAVIVGAGPVGLFQVFELGLLEIKAHVIDSLAYPGGQC CCCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE IELYPDKPIYDIPAVPMCTGKELTDSLLKQIEPFGATFHFGQEVSVVEKQEDGRFFVETS EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCCEEEEEEC KGTKFLTKTIFIAAGVGAFQPKLLRVDGLDQFDNTQLFYRVKNPADFAGKNLVIVGGGDS CCCCHHHHEEHEEECCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCH ALDWALNFVAEGPNKAESVILVHRRDGFKAAPASVAKMKELCDAYEMQFIVGQVTGYDEK HHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCC NGKMTGAKVTGADGVTRVVPLDVLLVFFGLSPKLGPIAHWGLDIERKQLMVDTEKFSTNI CCEEECEEEECCCCCEEHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHEEEEHHHHCCCC PGIFAVGDINTYPGKKKLILSGFHECALAAFGAAPFIFPDKKIHLQYTTTSPKLHKVLGV CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCEEEEEEECCCCHHHHHHCC ESPVFD CCCCCC >Mature Secondary Structure MEPQLNQEVINTAAQHDGPIETDAVIVGAGPVGLFQVFELGLLEIKAHVIDSLAYPGGQC CCCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE IELYPDKPIYDIPAVPMCTGKELTDSLLKQIEPFGATFHFGQEVSVVEKQEDGRFFVETS EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCCEEEEEEC KGTKFLTKTIFIAAGVGAFQPKLLRVDGLDQFDNTQLFYRVKNPADFAGKNLVIVGGGDS CCCCHHHHEEHEEECCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCH ALDWALNFVAEGPNKAESVILVHRRDGFKAAPASVAKMKELCDAYEMQFIVGQVTGYDEK HHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCC NGKMTGAKVTGADGVTRVVPLDVLLVFFGLSPKLGPIAHWGLDIERKQLMVDTEKFSTNI CCEEECEEEECCCCCEEHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHEEEEHHHHCCCC PGIFAVGDINTYPGKKKLILSGFHECALAAFGAAPFIFPDKKIHLQYTTTSPKLHKVLGV CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCEEEEEEECCCCHHHHHHCC ESPVFD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA