| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788201
Identifier: 91788201
GI number: 91788201
Start: 2429360
End: 2430676
Strand: Reverse
Name: 91788201
Synonym: Bpro_2332
Alternate gene names: NA
Gene position: 2430676-2429360 (Counterclockwise)
Preceding gene: 91788202
Following gene: 91788199
Centisome position: 46.74
GC content: 65.0
Gene sequence:
>1317_bases ATGTCGACGTCACGCCCATCATCTCCATCACCCCAGTCCTCCAGCGCAGGCAATACCGCGCTCACGCCACTGGCGGCGAA TGAACGCCTGTTCGGCTGGCGCGATCATGCCGCACTCTGGCTCAGCCTCGGCGTCGGCCTGCTCGTCATGCAGGTTGGTG CCTACCTCGTGCCCGCACTGGGCGCCAAGGCAGCCCTTGGGGTCATTGTCTGCGGCTCGGTCATCGGCGCGGGTTTGTTG GCCTGGACCGCCAGAATCGGCTGTGACAGCGGCCTCTCAAGCGCCGGCCTGATGCATGCCACTTACGGAAGCAGTTTCGC GCGCCTGCCTGTGCTGCTGAATATCGTGCAACTCATCGGCTGGACCACTTTCGAGCTCGTCATCATGCGCGACGGCACGG TGGCTATCGCACGCCAGTCCGGCGGTTTTTCCGGCACCTTCTGGCCCATCCTGGCCACCGTGCTCTGGGGCGGCATACTG CTGGCCCTGCTGTCGGGCTCCATGGTGAAACTGGTGCGCAAATTCATAGGCCGCTACGGTCTGCCGCTGGTGATCGCCTC CTTGTTGTGGCTGACCTGGCAGTTTCTTGCCAAGGCAAACCATCAGGGCATCGCCGCGCTGTGGAATCGCCCCGGCGAAG GCGGCATGAGCACACTGCAAGCGCTCGATCTGGTGATCGCCATGCCGGTCTCATGGTTGCCCCTGGTCGCAGACTTTGCG CGCCACGGGCGTGACGGCAAAAGCGCCCTGCGCGGCACCTGGCTGGGCTATGCCATTGCCAATACCTGGTGCTATGCGCT GGGCGTGCTGGTGGCCCTGACGACACCCGGCACCGACCTGGTGGCGGCCCTGCTGCTGGCGCAAGGCGGCCTGCTTGCGC TGGGGCTGATTCTGATCGACGAAGTGGACAACGCCTACGGCGATGTTTACTCAGGCTCGGTCGCAGGCCACAGCCTCAAG CCCAACTGGAGCGTGCGGGCTTGGGGCATGGTGCTGGCTCTGCTGTGCACGGTGCTGGCCCTGGTGCTGCCCATGCACAG CCTGGAGCCGTTTTTGCTGATGCTCAGTTCAGTGTTTGTACCGCTGTACGGCGTCATTCTGGCGAGGCTGGCCGGGCATC CCGACGTGGCGCTGCTCGTTACAAAGCGCAAGGTCAACACCAGCGCCGTTCTGATCTGGCTGCTGGGTATTGCCTGCTAC CACCTCTGCGCGCAACTGGTGCCCAGCTGGGGCGCCGCCCTGCCCACGCTGGTGCTGACGTTTGCGCTGGCGAGCCTCAC CCGTGTGAGCCGGCCACGGGTTGGCGCAGAGGCCTGA
Upstream 100 bases:
>100_bases TTGAAGTCATCCTCGCGCAGGGAAGCATGTGTCCAGCTGCCCCCTCGCGGCGCCCAACATGCCGACCGGTCATGGACGAG CGGAACTGTTGATCGCCACC
Downstream 100 bases:
>100_bases GCCGCATGGCTTGGGGTGCGTAGCCATGGTTGAGGGGCCCGCTGCCGGCACCGGTGCGCACAGCGGCACCCGCTTCCAAC GCCCCGCGCACATAGGCCCG
Product: cytosine/purines, uracil, thiamine, allantoin permease
Products: NA
Alternate protein names: Permease For Cytosine/Purines Uracil Thiamine Allantoin; Permease; Cytosine Permease; CytX-Like Hydroxymethylpyrimidine Transporter Protein; Purine-Cytosine Permease ; Cytosine/Purines/Uracil Permease; NCS1 Nucleoside Transporter; NCS1 Family Transporter; Permease For Cytosine/Purine Uracil Thiamine Allantoin
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MSTSRPSSPSPQSSSAGNTALTPLAANERLFGWRDHAALWLSLGVGLLVMQVGAYLVPALGAKAALGVIVCGSVIGAGLL AWTARIGCDSGLSSAGLMHATYGSSFARLPVLLNIVQLIGWTTFELVIMRDGTVAIARQSGGFSGTFWPILATVLWGGIL LALLSGSMVKLVRKFIGRYGLPLVIASLLWLTWQFLAKANHQGIAALWNRPGEGGMSTLQALDLVIAMPVSWLPLVADFA RHGRDGKSALRGTWLGYAIANTWCYALGVLVALTTPGTDLVAALLLAQGGLLALGLILIDEVDNAYGDVYSGSVAGHSLK PNWSVRAWGMVLALLCTVLALVLPMHSLEPFLLMLSSVFVPLYGVILARLAGHPDVALLVTKRKVNTSAVLIWLLGIACY HLCAQLVPSWGAALPTLVLTFALASLTRVSRPRVGAEA
Sequences:
>Translated_438_residues MSTSRPSSPSPQSSSAGNTALTPLAANERLFGWRDHAALWLSLGVGLLVMQVGAYLVPALGAKAALGVIVCGSVIGAGLL AWTARIGCDSGLSSAGLMHATYGSSFARLPVLLNIVQLIGWTTFELVIMRDGTVAIARQSGGFSGTFWPILATVLWGGIL LALLSGSMVKLVRKFIGRYGLPLVIASLLWLTWQFLAKANHQGIAALWNRPGEGGMSTLQALDLVIAMPVSWLPLVADFA RHGRDGKSALRGTWLGYAIANTWCYALGVLVALTTPGTDLVAALLLAQGGLLALGLILIDEVDNAYGDVYSGSVAGHSLK PNWSVRAWGMVLALLCTVLALVLPMHSLEPFLLMLSSVFVPLYGVILARLAGHPDVALLVTKRKVNTSAVLIWLLGIACY HLCAQLVPSWGAALPTLVLTFALASLTRVSRPRVGAEA >Mature_437_residues STSRPSSPSPQSSSAGNTALTPLAANERLFGWRDHAALWLSLGVGLLVMQVGAYLVPALGAKAALGVIVCGSVIGAGLLA WTARIGCDSGLSSAGLMHATYGSSFARLPVLLNIVQLIGWTTFELVIMRDGTVAIARQSGGFSGTFWPILATVLWGGILL ALLSGSMVKLVRKFIGRYGLPLVIASLLWLTWQFLAKANHQGIAALWNRPGEGGMSTLQALDLVIAMPVSWLPLVADFAR HGRDGKSALRGTWLGYAIANTWCYALGVLVALTTPGTDLVAALLLAQGGLLALGLILIDEVDNAYGDVYSGSVAGHSLKP NWSVRAWGMVLALLCTVLALVLPMHSLEPFLLMLSSVFVPLYGVILARLAGHPDVALLVTKRKVNTSAVLIWLLGIACYH LCAQLVPSWGAALPTLVLTFALASLTRVSRPRVGAEA
Specific function: Unknown
COG id: COG1457
COG function: function code F; Purine-cytosine permease and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46116; Mature: 45985
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSRPSSPSPQSSSAGNTALTPLAANERLFGWRDHAALWLSLGVGLLVMQVGAYLVPAL CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GAKAALGVIVCGSVIGAGLLAWTARIGCDSGLSSAGLMHATYGSSFARLPVLLNIVQLIG CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHCCCHHHHHHHHHHHHHHC WTTFELVIMRDGTVAIARQSGGFSGTFWPILATVLWGGILLALLSGSMVKLVRKFIGRYG CCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC LPLVIASLLWLTWQFLAKANHQGIAALWNRPGEGGMSTLQALDLVIAMPVSWLPLVADFA HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH RHGRDGKSALRGTWLGYAIANTWCYALGVLVALTTPGTDLVAALLLAQGGLLALGLILID HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH EVDNAYGDVYSGSVAGHSLKPNWSVRAWGMVLALLCTVLALVLPMHSLEPFLLMLSSVFV HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH PLYGVILARLAGHPDVALLVTKRKVNTSAVLIWLLGIACYHLCAQLVPSWGAALPTLVLT HHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH FALASLTRVSRPRVGAEA HHHHHHHHHCCCCCCCCC >Mature Secondary Structure STSRPSSPSPQSSSAGNTALTPLAANERLFGWRDHAALWLSLGVGLLVMQVGAYLVPAL CCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GAKAALGVIVCGSVIGAGLLAWTARIGCDSGLSSAGLMHATYGSSFARLPVLLNIVQLIG CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHCCCHHHHHHHHHHHHHHC WTTFELVIMRDGTVAIARQSGGFSGTFWPILATVLWGGILLALLSGSMVKLVRKFIGRYG CCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC LPLVIASLLWLTWQFLAKANHQGIAALWNRPGEGGMSTLQALDLVIAMPVSWLPLVADFA HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH RHGRDGKSALRGTWLGYAIANTWCYALGVLVALTTPGTDLVAALLLAQGGLLALGLILID HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH EVDNAYGDVYSGSVAGHSLKPNWSVRAWGMVLALLCTVLALVLPMHSLEPFLLMLSSVFV HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH PLYGVILARLAGHPDVALLVTKRKVNTSAVLIWLLGIACYHLCAQLVPSWGAALPTLVLT HHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH FALASLTRVSRPRVGAEA HHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA