Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is fdxA [H]

Identifier: 91788203

GI number: 91788203

Start: 2432213

End: 2432542

Strand: Reverse

Name: fdxA [H]

Synonym: Bpro_2334

Alternate gene names: 91788203

Gene position: 2432542-2432213 (Counterclockwise)

Preceding gene: 91788204

Following gene: 91788202

Centisome position: 46.78

GC content: 58.48

Gene sequence:

>330_bases
ATGACACACATCGTCTCCGAATCCTGCATCCGCTGCAAATACACCGACTGTGTTGACGTTTGCCCCGTGGACTGCTTCCG
CGAAGGCCCCAACATGCTGGTGATTGATCCGGACGAGTGCATTGATTGCGCCGTGTGCATTCCGGAATGCCCCGTCAACG
CCATCTATGCCGAGGAAGATGTGCCGGCCGACCAGCTGCAGTTCATCAAGCTCAATGCCGAACTGAGCCGCGCCGCAGGA
TGGAAAAGCATCACCAAGCGCAAGGACGCCCTGCCCGACGCGGAAGAGTGGAAAGACAAGACCGGAAAGCTGGACGAACT
GGTGCGCTGA

Upstream 100 bases:

>100_bases
CTGGTTCTTTAAGCTGCCAAGGCCCTTTCAATTCACTGCTTCAACGCTGCTACTGGAAACCTCTTAAAATCAAGGGTTTC
CACCGATCAGCCAATACAAC

Downstream 100 bases:

>100_bases
AACTCGCGCGCTGCCGGTCCCGCCCGAGCTATTTAGCCCGAGCTATTTAATAAGCAAGTCAAGAAAAAATGGAACCTCAA
CTGAATCAAGAAGTGATCAA

Product: 4Fe-4S ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MTHIVSESCIRCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPVNAIYAEEDVPADQLQFIKLNAELSRAAG
WKSITKRKDALPDAEEWKDKTGKLDELVR

Sequences:

>Translated_109_residues
MTHIVSESCIRCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPVNAIYAEEDVPADQLQFIKLNAELSRAAG
WKSITKRKDALPDAEEWKDKTGKLDELVR
>Mature_108_residues
THIVSESCIRCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPVNAIYAEEDVPADQLQFIKLNAELSRAAGW
KSITKRKDALPDAEEWKDKTGKLDELVR

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR000813
- InterPro:   IPR022569 [H]

Pfam domain/function: PF11953 DUF3470 [H]

EC number: NA

Molecular weight: Translated: 12249; Mature: 12118

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
10.1 %Cys+Met (Translated Protein)
8.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHIVSESCIRCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPVNAIYAEED
CCCCCCCCCCEECCCCCCCCCCCHHHHCCCCEEEECCHHHCEEEEECCCCCCCEEECCCC
VPADQLQFIKLNAELSRAAGWKSITKRKDALPDAEEWKDKTGKLDELVR
CCCCCEEEEEECCHHHHHCCHHHHHHHHHCCCCHHHHHHHCCCHHHHCC
>Mature Secondary Structure 
THIVSESCIRCKYTDCVDVCPVDCFREGPNMLVIDPDECIDCAVCIPECPVNAIYAEED
CCCCCCCCCEECCCCCCCCCCCHHHHCCCCEEEECCHHHCEEEEECCCCCCCEEECCCC
VPADQLQFIKLNAELSRAAGWKSITKRKDALPDAEEWKDKTGKLDELVR
CCCCCEEEEEECCHHHHHCCHHHHHHHHHCCCCHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]