| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is aldH [H]
Identifier: 91788167
GI number: 91788167
Start: 2391136
End: 2392608
Strand: Reverse
Name: aldH [H]
Synonym: Bpro_2298
Alternate gene names: 91788167
Gene position: 2392608-2391136 (Counterclockwise)
Preceding gene: 91788168
Following gene: 91788166
Centisome position: 46.01
GC content: 69.65
Gene sequence:
>1473_bases ATGAACACCCTGCAATCATTCAAAGCCCGCACCGGCGAAGCCTTCGGCGCCCCTCTTCCCGCCAGCACCCCGGAGCAGGT CAACGCCGCGGCCGTTGCCGCCCAAGCCACCTTCGCCAGCTGGTCTGCCAGTACCGGCACCACCCGCGGAGCACTGCTGC GCGCGCTGGCCGCAGCGCTGGAAGCTGACCGGGACGAACTGGTAGCCGTGGCAGACGAGGAGACTGCGCTGGGTCCGGTG CGCCTGAACGGCGAACTCGACCGCACCGCCTTCCAGTTGCGCCGCTTTGCCGATATCGCCGAGCGCGGCGTGCCCTTTGC CACCACGGATGATCCCGCCGTGGCCGGCCCCCCGCCCGCCGGTCACCCGGCCATGGTCCGCCTGCGCGTGCCGCTGGGCC CTGTCGCCATGTTCTCGGCCAGCAATTTCCCGTTCGCGTTCTCGGTGCTGGGTGGCGACACCGCTTCGGCACTGGCTGCC GGCTGCCCGGTGGTCGTCAAGGCCCACTCGGGCCACCTGGTGTTGTCAAACCGGGCATTTGGCCTGGTCCAGCAAGTCCT CAAGGCCCAAAACCTGCCCGCAGGCCTGATCGGCATGATCCAGGGCGGCGGCTCCGATGTGGGCGTGCGTCTGGTGCGCC ACCCGGCGATGGCCGCCGGCGCCTTCACCGGCTCGACGCGCGGCGGCGCGGCATTGCAGGCCGAGGCCAACGCGCGGCCA CGCCCGATTCCGTTTTATGGCGAACTGGGGTCAACGAACCCCGTTGTCGCCCTGCCCGGCATTCTTGCTGCGCGCGGCGC CGAGCTGGCCGGCGTGCTCGCCGGATCGATTTCCCTCGGATGCGGCCAGTTCTGTACCAGCCCCGGTGTGATCGTGCTGC TCAAGGACCCTGCGAGCGACGCGTTTGTGCAGCAACTGACAAGCGCCCTGGCCACACAAAAACCCCATGCCATGCTGACC CCGGGCATGCGCAGCGCCTTCGATGCCGGTGTAGCCCACATGGCCTCCGCCGGTGCGCAGCCCTTGCTGCAGGAAGCCGG CAGCGCCGAGGCGCCCCGGCCCTTCCTGGCCCAGGTGGACGCCGTGAATTTCATCGCCAAGACCGAGTTGCGCGAAGAAG TGTTCGGCCCCTCCAGCCTGATCGTGCGTGCCGATTCCATCGCGCAGGTGCTCGACGTGCTGCACGCCGTGGGTGGCAGC CTGACGGTGACCCTCTGGGGTGCGGAAGACGACAATGCCGACACCCGCGCACTGGTGCGCGGCGCCACAGCCATTGCGGG ACGCGTGCTGTTCGCCGGTGTGCCCACAGGTGTGGCCGTCACGGCCGCGCAGCAGCACGGCGGCCCATGGCCTTCGTCGA CCCAGCCCATGACCACCTCGGTGGGTGACGCGGCGATGGAGCGCTTTCTGCGTCCCGTGGCCCTGCAGGACGCGCCAGCC TGGCTGCTGGCACGCAAGGGACAGCCATGCTGA
Upstream 100 bases:
>100_bases CTAACATACGACAAAGACAAGCACCAATGAAGCGCCCTGATGCCCTGTCCGTCCCGATCAGGATCCTCTCTTTCATTCGC CCCCGAACCATTCAATTGCC
Downstream 100 bases:
>100_bases ACCACCTCGTGATGTTCCGCCGTTCCGCCGCAAACGGGACGTTGAGGCCTGAACGACTATCTGTTCCACCCATTGCACCA GGCCCTGATCGCCGACCTCA
Product: aldehyde dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MNTLQSFKARTGEAFGAPLPASTPEQVNAAAVAAQATFASWSASTGTTRGALLRALAAALEADRDELVAVADEETALGPV RLNGELDRTAFQLRRFADIAERGVPFATTDDPAVAGPPPAGHPAMVRLRVPLGPVAMFSASNFPFAFSVLGGDTASALAA GCPVVVKAHSGHLVLSNRAFGLVQQVLKAQNLPAGLIGMIQGGGSDVGVRLVRHPAMAAGAFTGSTRGGAALQAEANARP RPIPFYGELGSTNPVVALPGILAARGAELAGVLAGSISLGCGQFCTSPGVIVLLKDPASDAFVQQLTSALATQKPHAMLT PGMRSAFDAGVAHMASAGAQPLLQEAGSAEAPRPFLAQVDAVNFIAKTELREEVFGPSSLIVRADSIAQVLDVLHAVGGS LTVTLWGAEDDNADTRALVRGATAIAGRVLFAGVPTGVAVTAAQQHGGPWPSSTQPMTTSVGDAAMERFLRPVALQDAPA WLLARKGQPC
Sequences:
>Translated_490_residues MNTLQSFKARTGEAFGAPLPASTPEQVNAAAVAAQATFASWSASTGTTRGALLRALAAALEADRDELVAVADEETALGPV RLNGELDRTAFQLRRFADIAERGVPFATTDDPAVAGPPPAGHPAMVRLRVPLGPVAMFSASNFPFAFSVLGGDTASALAA GCPVVVKAHSGHLVLSNRAFGLVQQVLKAQNLPAGLIGMIQGGGSDVGVRLVRHPAMAAGAFTGSTRGGAALQAEANARP RPIPFYGELGSTNPVVALPGILAARGAELAGVLAGSISLGCGQFCTSPGVIVLLKDPASDAFVQQLTSALATQKPHAMLT PGMRSAFDAGVAHMASAGAQPLLQEAGSAEAPRPFLAQVDAVNFIAKTELREEVFGPSSLIVRADSIAQVLDVLHAVGGS LTVTLWGAEDDNADTRALVRGATAIAGRVLFAGVPTGVAVTAAQQHGGPWPSSTQPMTTSVGDAAMERFLRPVALQDAPA WLLARKGQPC >Mature_490_residues MNTLQSFKARTGEAFGAPLPASTPEQVNAAAVAAQATFASWSASTGTTRGALLRALAAALEADRDELVAVADEETALGPV RLNGELDRTAFQLRRFADIAERGVPFATTDDPAVAGPPPAGHPAMVRLRVPLGPVAMFSASNFPFAFSVLGGDTASALAA GCPVVVKAHSGHLVLSNRAFGLVQQVLKAQNLPAGLIGMIQGGGSDVGVRLVRHPAMAAGAFTGSTRGGAALQAEANARP RPIPFYGELGSTNPVVALPGILAARGAELAGVLAGSISLGCGQFCTSPGVIVLLKDPASDAFVQQLTSALATQKPHAMLT PGMRSAFDAGVAHMASAGAQPLLQEAGSAEAPRPFLAQVDAVNFIAKTELREEVFGPSSLIVRADSIAQVLDVLHAVGGS LTVTLWGAEDDNADTRALVRGATAIAGRVLFAGVPTGVAVTAAQQHGGPWPSSTQPMTTSVGDAAMERFLRPVALQDAPA WLLARKGQPC
Specific function: Catalyzes the oxidation of long-chain aliphatic aldehydes to acids. May be implicated in controlling luminescence as it catalyzes the oxidation of the fatty aldehyde substrate for the light-emitting reaction [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldehyde dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI21614513, Length=367, Percent_Identity=24.7956403269755, Blast_Score=70, Evalue=4e-12, Organism=Escherichia coli, GI1787558, Length=400, Percent_Identity=27.5, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87081896, Length=416, Percent_Identity=25.9615384615385, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1787250, Length=472, Percent_Identity=25.635593220339, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1789015, Length=304, Percent_Identity=25.9868421052632, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17551164, Length=418, Percent_Identity=22.7272727272727, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI133930964, Length=401, Percent_Identity=25.9351620947631, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71995613, Length=327, Percent_Identity=27.217125382263, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71995606, Length=326, Percent_Identity=27.3006134969325, Blast_Score=65, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6323821, Length=309, Percent_Identity=28.1553398058252, Blast_Score=77, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6323822, Length=312, Percent_Identity=27.2435897435897, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24666674, Length=306, Percent_Identity=26.1437908496732, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 [H]
Pfam domain/function: PF00171 Aldedh [H]
EC number: =1.2.1.4 [H]
Molecular weight: Translated: 49922; Mature: 49922
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLQSFKARTGEAFGAPLPASTPEQVNAAAVAAQATFASWSASTGTTRGALLRALAAAL CCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH EADRDELVAVADEETALGPVRLNGELDRTAFQLRRFADIAERGVPFATTDDPAVAGPPPA HCCCCCEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GHPAMVRLRVPLGPVAMFSASNFPFAFSVLGGDTASALAAGCPVVVKAHSGHLVLSNRAF CCCEEEEEECCCCCEEEEECCCCCEEEEEECCCHHHHHHCCCCEEEEECCCEEEECCCHH GLVQQVLKAQNLPAGLIGMIQGGGSDVGVRLVRHPAMAAGAFTGSTRGGAALQAEANARP HHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCHHHCCCCCCCCCCEEEEECCCCCC RPIPFYGELGSTNPVVALPGILAARGAELAGVLAGSISLGCGQFCTSPGVIVLLKDPASD CCCCCCCCCCCCCCEEECCCHHHHCCCHHHHHHHCCHHCCCHHHCCCCCEEEEEECCCCH AFVQQLTSALATQKPHAMLTPGMRSAFDAGVAHMASAGAQPLLQEAGSAEAPRPFLAQVD HHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHH AVNFIAKTELREEVFGPSSLIVRADSIAQVLDVLHAVGGSLTVTLWGAEDDNADTRALVR HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH GATAIAGRVLFAGVPTGVAVTAAQQHGGPWPSSTQPMTTSVGDAAMERFLRPVALQDAPA HHHHHHCEEEEECCCCCEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCH WLLARKGQPC HEEECCCCCC >Mature Secondary Structure MNTLQSFKARTGEAFGAPLPASTPEQVNAAAVAAQATFASWSASTGTTRGALLRALAAAL CCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH EADRDELVAVADEETALGPVRLNGELDRTAFQLRRFADIAERGVPFATTDDPAVAGPPPA HCCCCCEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GHPAMVRLRVPLGPVAMFSASNFPFAFSVLGGDTASALAAGCPVVVKAHSGHLVLSNRAF CCCEEEEEECCCCCEEEEECCCCCEEEEEECCCHHHHHHCCCCEEEEECCCEEEECCCHH GLVQQVLKAQNLPAGLIGMIQGGGSDVGVRLVRHPAMAAGAFTGSTRGGAALQAEANARP HHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCHHHCCCCCCCCCCEEEEECCCCCC RPIPFYGELGSTNPVVALPGILAARGAELAGVLAGSISLGCGQFCTSPGVIVLLKDPASD CCCCCCCCCCCCCCEEECCCHHHHCCCHHHHHHHCCHHCCCHHHCCCCCEEEEEECCCCH AFVQQLTSALATQKPHAMLTPGMRSAFDAGVAHMASAGAQPLLQEAGSAEAPRPFLAQVD HHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHH AVNFIAKTELREEVFGPSSLIVRADSIAQVLDVLHAVGGSLTVTLWGAEDDNADTRALVR HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH GATAIAGRVLFAGVPTGVAVTAAQQHGGPWPSSTQPMTTSVGDAAMERFLRPVALQDAPA HHHHHHCEEEEECCCCCEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCH WLLARKGQPC HEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8527447; 10903148 [H]