Click here to switch to the map view.

The map label for this gene is 91788046

Identifier: 91788046

GI number: 91788046

Start: 2267273

End: 2268742

Strand: Reverse

Name: 91788046

Synonym: Bpro_2173

Alternate gene names: NA

Gene position: 2268742-2267273 (Counterclockwise)

Preceding gene: 91788048

Following gene: 91788045

Centisome position: 43.63

GC content: 59.05

Gene sequence:

>1470_bases
ATGCTCTACCAAGTCTATGAAGCCCAGCGCACACTGATGGAGCCCTTTGTTGACTTTGCGCAGGCGGCTGCGAAACTCTT
CAGCAACCCCTTGTCGCCAGTGGGGCAGAACCCTTTTGCGCAGCGTGTGGCCGCCGGCTACAGCCTGATTTACCGCTTGG
GCAAAGACTACGAAAAGCCAACATTCGACATCAAGACCGTCGATGTGAACGGCACGGATGTGACCATCCACGAACGGGTG
GAAATCAACAAGCCGTTTTGCGAGCTGCGCCGCTTCAAGCGCTTCACCGACGACCCCGCCACGCTGACCGGCCTGAAGGG
CGAGCCGGCGGTGCTGATCGTGGCGCCGCTGTCGGGCCACTACGCCACCTTGCTGCGCGACACCGTCAAAACCATGCTCA
AGGACCACAAGGTCTACATCACCGACTGGAAAAACGCCCGCACTGTCCCTCTGTCCGAGGGTTCGTTCCACCTGGATGAC
TATGTCAATTACGTTCAGGAATTCATTCGTCATATCCAGGGCAGTTACGGCAACTGCCATGTCATCAGCGTTTGCCAGCC
AACGGTGCCGGTGCTGGCCGCCGTGTCGCTGATGGCTTCGCGCGGCGAGTTGACGCCCCTGAGCATGACGATGATGGGCG
GCCCGATTGATGCCCGCAAGTCGCCAACGGCGGTCAACAACCTGGCAATGAACAAGAGCTTTGAGTGGTTTGAAAACAAC
GTAATCTACCGGGTGCCCAGCAACTTCCCGGGCGCGGGACGGCGGGTCTACCCCGGCTTTTTGCAGCATACCGGCTTTGT
CGCGATGAATCCCGACCGCCACGCCAGCAGCCACTACGACTATTTCAAGGATCTGCTCAAGGGCGACGATGCCAGCGCGG
AAGCCCATCGCAAGTTTTACGACGAGTACAACGCGGTGCTCGACATGGACGCGGACTACTACCTCGACACCATCAACACC
GTATTCCAGGAATTCAAGCTGGTCAACGGTACCTGGGATGTCGTGGGCGTGGACGGCAAGATCGAACGCGTGCGCCCCGA
AGACATCAAAACGACAGCCCACTTCACCATTGAAGGTGAACTGGACGACATTTCCGGCTCTGGCCAGACCGAAGCTGCCC
ACGACCTTTGCTACAACGTCCCGAAGGCCCGCCAGAAACACCTGGAAGTCAAAGGTGCCGGGCACTATGGCATCTTCAGC
GGCCGTCGCTGGCGCGAGATCGTTTACCCGCAGGTCAAAGCCTTTATTTTTGAGCAACACGGCCAGCGCAAGGCCACCAA
CACATTGCCTCCTCTGGCAGTGCAACCGGCAAAGCCAGCCGCGCCATCAACCGGCACGACGAAACGCAATGCCGGCAAAG
TGGCCGTAGTAGCTGCCCCCAAGGCAAAAGCGCCAGCAAAAGCGGTCGCAAAACCGGCAGCAAAACCGTCAGGCCGTGGG
ACCGCAAAGACGGCTCGCAAAACAAGCTGA

Upstream 100 bases:

>100_bases
AGACCCAGAGGGTCAATGCCTGTTATATTGCACTGCAACATGCACCGATTTCGCCCAGATCTCGCCCCAAATTAATCCAG
AAATTACGAAGGTTTGTCCC

Downstream 100 bases:

>100_bases
GCTGGTGGTTGAACTTTACGGAGCCGCATCACCCTAAACCTGGGTAGCGGTTGCCGGTGCGGGCATGGGTCAAGGATTGG
GTTCACGCAATGCCCGCCGG

Product: polyhydroxyalkanoate depolymerase

Products: NA

Alternate protein names: Intracellular PHB Depolymerase; Polyhydroxyalkanoate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase; PHB Depolymerase; Intracellular Poly(3-Hydroxybutyrate) Depolymerase; Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Intracellular Polyhydroxyalkanoate Depolymerase; PHB De-Polymerase Domain-Containing Protein; Polyhydroxyalkanoate Depolymerase Intracellular Subfamily; Poly(3-Hydroxyalkanoate) Depolymerase; Poly(3-Hydroxybutyrate) Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase Protein; Poly[D(-)-3-Hydroxyalkanoate] Depolymerase; Polyhydroxybutanoate Depolymerase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Intracellular PHB Depolymerase Protein; Poly-Beta-Hydroxybutyrate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase-Like Protein; Intracellular Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Poly[D(-)-3-Hydroxybutyrate](Phb) Depolymerase; Poly-Beta-Hydroxyalkanoate/Butyrate Depolymerase

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MLYQVYEAQRTLMEPFVDFAQAAAKLFSNPLSPVGQNPFAQRVAAGYSLIYRLGKDYEKPTFDIKTVDVNGTDVTIHERV
EINKPFCELRRFKRFTDDPATLTGLKGEPAVLIVAPLSGHYATLLRDTVKTMLKDHKVYITDWKNARTVPLSEGSFHLDD
YVNYVQEFIRHIQGSYGNCHVISVCQPTVPVLAAVSLMASRGELTPLSMTMMGGPIDARKSPTAVNNLAMNKSFEWFENN
VIYRVPSNFPGAGRRVYPGFLQHTGFVAMNPDRHASSHYDYFKDLLKGDDASAEAHRKFYDEYNAVLDMDADYYLDTINT
VFQEFKLVNGTWDVVGVDGKIERVRPEDIKTTAHFTIEGELDDISGSGQTEAAHDLCYNVPKARQKHLEVKGAGHYGIFS
GRRWREIVYPQVKAFIFEQHGQRKATNTLPPLAVQPAKPAAPSTGTTKRNAGKVAVVAAPKAKAPAKAVAKPAAKPSGRG
TAKTARKTS

Sequences:

>Translated_489_residues
MLYQVYEAQRTLMEPFVDFAQAAAKLFSNPLSPVGQNPFAQRVAAGYSLIYRLGKDYEKPTFDIKTVDVNGTDVTIHERV
EINKPFCELRRFKRFTDDPATLTGLKGEPAVLIVAPLSGHYATLLRDTVKTMLKDHKVYITDWKNARTVPLSEGSFHLDD
YVNYVQEFIRHIQGSYGNCHVISVCQPTVPVLAAVSLMASRGELTPLSMTMMGGPIDARKSPTAVNNLAMNKSFEWFENN
VIYRVPSNFPGAGRRVYPGFLQHTGFVAMNPDRHASSHYDYFKDLLKGDDASAEAHRKFYDEYNAVLDMDADYYLDTINT
VFQEFKLVNGTWDVVGVDGKIERVRPEDIKTTAHFTIEGELDDISGSGQTEAAHDLCYNVPKARQKHLEVKGAGHYGIFS
GRRWREIVYPQVKAFIFEQHGQRKATNTLPPLAVQPAKPAAPSTGTTKRNAGKVAVVAAPKAKAPAKAVAKPAAKPSGRG
TAKTARKTS
>Mature_489_residues
MLYQVYEAQRTLMEPFVDFAQAAAKLFSNPLSPVGQNPFAQRVAAGYSLIYRLGKDYEKPTFDIKTVDVNGTDVTIHERV
EINKPFCELRRFKRFTDDPATLTGLKGEPAVLIVAPLSGHYATLLRDTVKTMLKDHKVYITDWKNARTVPLSEGSFHLDD
YVNYVQEFIRHIQGSYGNCHVISVCQPTVPVLAAVSLMASRGELTPLSMTMMGGPIDARKSPTAVNNLAMNKSFEWFENN
VIYRVPSNFPGAGRRVYPGFLQHTGFVAMNPDRHASSHYDYFKDLLKGDDASAEAHRKFYDEYNAVLDMDADYYLDTINT
VFQEFKLVNGTWDVVGVDGKIERVRPEDIKTTAHFTIEGELDDISGSGQTEAAHDLCYNVPKARQKHLEVKGAGHYGIFS
GRRWREIVYPQVKAFIFEQHGQRKATNTLPPLAVQPAKPAAPSTGTTKRNAGKVAVVAAPKAKAPAKAVAKPAAKPSGRG
TAKTARKTS

Specific function: Unknown

COG id: COG4553

COG function: function code I; Poly-beta-hydroxyalkanoate depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54264; Mature: 54264

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYQVYEAQRTLMEPFVDFAQAAAKLFSNPLSPVGQNPFAQRVAAGYSLIYRLGKDYEKP
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
TFDIKTVDVNGTDVTIHERVEINKPFCELRRFKRFTDDPATLTGLKGEPAVLIVAPLSGH
CEEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCCEEEEEECCCCH
YATLLRDTVKTMLKDHKVYITDWKNARTVPLSEGSFHLDDYVNYVQEFIRHIQGSYGNCH
HHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCEE
VISVCQPTVPVLAAVSLMASRGELTPLSMTMMGGPIDARKSPTAVNNLAMNKSFEWFENN
EEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCHHHHHCC
VIYRVPSNFPGAGRRVYPGFLQHTGFVAMNPDRHASSHYDYFKDLLKGDDASAEAHRKFY
EEEECCCCCCCCCCCCCCHHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
DEYNAVLDMDADYYLDTINTVFQEFKLVNGTWDVVGVDGKIERVRPEDIKTTAHFTIEGE
HHHHHEEECCCHHHHHHHHHHHHHHEEECCCEEEEECCCCEECCCCCCCCEEEEEEEECC
LDDISGSGQTEAAHDLCYNVPKARQKHLEVKGAGHYGIFSGRRWREIVYPQVKAFIFEQH
CCCCCCCCCCHHHHHHHHCCCHHHHHCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHC
GQRKATNTLPPLAVQPAKPAAPSTGTTKRNAGKVAVVAAPKAKAPAKAVAKPAAKPSGRG
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCC
TAKTARKTS
CCCCCCCCC
>Mature Secondary Structure
MLYQVYEAQRTLMEPFVDFAQAAAKLFSNPLSPVGQNPFAQRVAAGYSLIYRLGKDYEKP
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
TFDIKTVDVNGTDVTIHERVEINKPFCELRRFKRFTDDPATLTGLKGEPAVLIVAPLSGH
CEEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCCEEEEEECCCCH
YATLLRDTVKTMLKDHKVYITDWKNARTVPLSEGSFHLDDYVNYVQEFIRHIQGSYGNCH
HHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCEE
VISVCQPTVPVLAAVSLMASRGELTPLSMTMMGGPIDARKSPTAVNNLAMNKSFEWFENN
EEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCHHHHHCC
VIYRVPSNFPGAGRRVYPGFLQHTGFVAMNPDRHASSHYDYFKDLLKGDDASAEAHRKFY
EEEECCCCCCCCCCCCCCHHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
DEYNAVLDMDADYYLDTINTVFQEFKLVNGTWDVVGVDGKIERVRPEDIKTTAHFTIEGE
HHHHHEEECCCHHHHHHHHHHHHHHEEECCCEEEEECCCCEECCCCCCCCEEEEEEEECC
LDDISGSGQTEAAHDLCYNVPKARQKHLEVKGAGHYGIFSGRRWREIVYPQVKAFIFEQH
CCCCCCCCCCHHHHHHHHCCCHHHHHCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHC
GQRKATNTLPPLAVQPAKPAAPSTGTTKRNAGKVAVVAAPKAKAPAKAVAKPAAKPSGRG
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCC
TAKTARKTS
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA