| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788045
Identifier: 91788045
GI number: 91788045
Start: 2265430
End: 2267067
Strand: Reverse
Name: 91788045
Synonym: Bpro_2172
Alternate gene names: NA
Gene position: 2267067-2265430 (Counterclockwise)
Preceding gene: 91788046
Following gene: 91788044
Centisome position: 43.6
GC content: 60.87
Gene sequence:
>1638_bases ATGCGACAACTGGCGGGTGCCTGTGTGCTGTGTTTCCTGCTGGCTGCCTGCGGCGGCGGCGGCGGCGGGTCCTCCGGCAC CGGCGGCCCGACGGTGGTCAGCGGCAAGGTCACCTTCGATTTTGTGCCCGTCGCACTCACCGGCGCGCTGCCGCGGCTCG ACTATGACAACACGGCCCGCCGGCCTGCGCGTTCTGTCGTGGTTGAAGCGGTCGACACAGCCGCCCAGTCAGTCCTGGCC ACAGTCAGTACCAATGCCGCAGGCGATTACACCCTGACCCTGCCAGCGGGACGAACGGCATTTATCCGTGCCAAAGCCGC GATGAAGGCGATCGGCAGCAACGCGGCCGACATATCGGTGATCGACAACACCAGTGCCGGTGCGCAATGGGCCATTGACG GTGCCCCCTTTGTCACCGGCGTCACCCCCGCCTTGACCCAAAACCTCAACGCAGCTTCAGGCTGGAATGGCAGCACCTAC ATCGACGCCGAACGTGCCGCCGGGCCGTTCGCGATTCTGGATACGATTTACCAGGCCGCCCAGAAAATCATCTCGGTAGA TCCGGCCGTCAGCTTTCCCAAATTGAATGCGAACTGGAGTCCCAACAATATTGCGTCAGGTGGCGATATTGATATTGCAT TGGGGCAAATAGGAACGTCTTTTTACCAGCGTACAACAAGCGGTGGCACGGTGATCCGCAACCTCTATTTCCTGGGATTT GCCGACAACGACACCGACGAATACGACAGGCATGTGGTGGCGCATGAACTCGGGCACTACCTGCAGGAAGCCTTCGCGCG CGACGACTCGGTGGGTGGCCTGCATGGCGGCCCGGACGACCTGCTTGACCTGCGGGTGGCATTTTCGGAAGGCTGGAGCA ATGGCTGGTCGGGCATTGCGCTCAACAACCCGATTTACTCAGACACCATCGGGCCGAGCCAGGCCAGCGGCGGCAGCTTC AATGTGTCCGTCGGCGAAAGCACCAACCCGGGCTGGTTCAGGGAACACAGCGTGGAGAAAATATTCTGGGATTTCAGCAA CCACGCGTCGATTGGCTTCAGCCAGGTCTGGAGCACCCTGAAGACGGGCCTGACGGTTTCAGCGGCCCTCTCCAGCATCC ACTCATTTGCCCGGGCGCTTGCCAACGACACATCCAACAACGCCCTCGTCGCCAGCATTCTGGCCACGCAGAGCATCGCT CTACCCGCTACGCCCTATGCCGACAATGAGACCAATTTCGGCAATCCGGCGATTGCCAACATCAATCCGATCTACCTGAC CTATGGCTCGCTCAATACCGCCCTCACCAATGTGTGTGTGGACAATGCGGTCGATCCCTACCTTGACGCCAACAAGGCCG GTGAATATCGCCACGTCCGACTGACGCTGCCGGCCGGCAACCGCACCTTCACGGTCACGCAAAGCAGCAGCACCACCAAT GTGAGCGATCCTGATTTCGTCCTGCACAACAACGCGGGCCGACTGTTTGAGGCCAATGGGATCGTGTCAAATTCAGAAAC GGCGAGCTGGAGTCTGCCGGCCGGTGACTACGTACTGGCCATCACCGATTTCCGGCTTTTCCGGCCGACGTCCAGCGGCG GCAATACCAGCGCCTGCTTCAGCCTGACGGTCCAGTGA
Upstream 100 bases:
>100_bases TTAAACAGTGGATGGCATGAGGCCCCGGCATGACGGGTCGCGCCATGACGGCGAAGCTTGTCGTGGCGCCTGTGAATACT TCGTTCGAGGACGAGAAAAA
Downstream 100 bases:
>100_bases CCATGACGCCGTGGACCAGGAGTTCACCATGAAATTCGCCATGAAAAATAGCCAGTTGCTTTCCCCCTTCATACCGCTCT GTGTACTGGCTTGCATGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MRQLAGACVLCFLLAACGGGGGGSSGTGGPTVVSGKVTFDFVPVALTGALPRLDYDNTARRPARSVVVEAVDTAAQSVLA TVSTNAAGDYTLTLPAGRTAFIRAKAAMKAIGSNAADISVIDNTSAGAQWAIDGAPFVTGVTPALTQNLNAASGWNGSTY IDAERAAGPFAILDTIYQAAQKIISVDPAVSFPKLNANWSPNNIASGGDIDIALGQIGTSFYQRTTSGGTVIRNLYFLGF ADNDTDEYDRHVVAHELGHYLQEAFARDDSVGGLHGGPDDLLDLRVAFSEGWSNGWSGIALNNPIYSDTIGPSQASGGSF NVSVGESTNPGWFREHSVEKIFWDFSNHASIGFSQVWSTLKTGLTVSAALSSIHSFARALANDTSNNALVASILATQSIA LPATPYADNETNFGNPAIANINPIYLTYGSLNTALTNVCVDNAVDPYLDANKAGEYRHVRLTLPAGNRTFTVTQSSSTTN VSDPDFVLHNNAGRLFEANGIVSNSETASWSLPAGDYVLAITDFRLFRPTSSGGNTSACFSLTVQ
Sequences:
>Translated_545_residues MRQLAGACVLCFLLAACGGGGGGSSGTGGPTVVSGKVTFDFVPVALTGALPRLDYDNTARRPARSVVVEAVDTAAQSVLA TVSTNAAGDYTLTLPAGRTAFIRAKAAMKAIGSNAADISVIDNTSAGAQWAIDGAPFVTGVTPALTQNLNAASGWNGSTY IDAERAAGPFAILDTIYQAAQKIISVDPAVSFPKLNANWSPNNIASGGDIDIALGQIGTSFYQRTTSGGTVIRNLYFLGF ADNDTDEYDRHVVAHELGHYLQEAFARDDSVGGLHGGPDDLLDLRVAFSEGWSNGWSGIALNNPIYSDTIGPSQASGGSF NVSVGESTNPGWFREHSVEKIFWDFSNHASIGFSQVWSTLKTGLTVSAALSSIHSFARALANDTSNNALVASILATQSIA LPATPYADNETNFGNPAIANINPIYLTYGSLNTALTNVCVDNAVDPYLDANKAGEYRHVRLTLPAGNRTFTVTQSSSTTN VSDPDFVLHNNAGRLFEANGIVSNSETASWSLPAGDYVLAITDFRLFRPTSSGGNTSACFSLTVQ >Mature_545_residues MRQLAGACVLCFLLAACGGGGGGSSGTGGPTVVSGKVTFDFVPVALTGALPRLDYDNTARRPARSVVVEAVDTAAQSVLA TVSTNAAGDYTLTLPAGRTAFIRAKAAMKAIGSNAADISVIDNTSAGAQWAIDGAPFVTGVTPALTQNLNAASGWNGSTY IDAERAAGPFAILDTIYQAAQKIISVDPAVSFPKLNANWSPNNIASGGDIDIALGQIGTSFYQRTTSGGTVIRNLYFLGF ADNDTDEYDRHVVAHELGHYLQEAFARDDSVGGLHGGPDDLLDLRVAFSEGWSNGWSGIALNNPIYSDTIGPSQASGGSF NVSVGESTNPGWFREHSVEKIFWDFSNHASIGFSQVWSTLKTGLTVSAALSSIHSFARALANDTSNNALVASILATQSIA LPATPYADNETNFGNPAIANINPIYLTYGSLNTALTNVCVDNAVDPYLDANKAGEYRHVRLTLPAGNRTFTVTQSSSTTN VSDPDFVLHNNAGRLFEANGIVSNSETASWSLPAGDYVLAITDFRLFRPTSSGGNTSACFSLTVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56968; Mature: 56968
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQLAGACVLCFLLAACGGGGGGSSGTGGPTVVSGKVTFDFVPVALTGALPRLDYDNTAR CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECEEEEEEEEEHHHCCCCCCCCCCCCC RPARSVVVEAVDTAAQSVLATVSTNAAGDYTLTLPAGRTAFIRAKAAMKAIGSNAADISV CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEHHHHHHHHCCCCCEEEE IDNTSAGAQWAIDGAPFVTGVTPALTQNLNAASGWNGSTYIDAERAAGPFAILDTIYQAA EECCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCEEEEHHHCCCCHHHHHHHHHHH QKIISVDPAVSFPKLNANWSPNNIASGGDIDIALGQIGTSFYQRTTSGGTVIRNLYFLGF HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEEEEEEE ADNDTDEYDRHVVAHELGHYLQEAFARDDSVGGLHGGPDDLLDLRVAFSEGWSNGWSGIA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEEEECCCCCCCCCCEE LNNPIYSDTIGPSQASGGSFNVSVGESTNPGWFREHSVEKIFWDFSNHASIGFSQVWSTL ECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCHHEEEECCCCCCCCHHHHHHHH KTGLTVSAALSSIHSFARALANDTSNNALVASILATQSIALPATPYADNETNFGNPAIAN HHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCEECCCCCCCCCCCCCCCCEEEC INPIYLTYGSLNTALTNVCVDNAVDPYLDANKAGEYRHVRLTLPAGNRTFTVTQSSSTTN CCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCC VSDPDFVLHNNAGRLFEANGIVSNSETASWSLPAGDYVLAITDFRLFRPTSSGGNTSACF CCCCCEEEECCCCCEEECCCCCCCCCCCEEECCCCCEEEEEEEEEEECCCCCCCCCEEEE SLTVQ EEEEC >Mature Secondary Structure MRQLAGACVLCFLLAACGGGGGGSSGTGGPTVVSGKVTFDFVPVALTGALPRLDYDNTAR CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECEEEEEEEEEHHHCCCCCCCCCCCCC RPARSVVVEAVDTAAQSVLATVSTNAAGDYTLTLPAGRTAFIRAKAAMKAIGSNAADISV CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEHHHHHHHHCCCCCEEEE IDNTSAGAQWAIDGAPFVTGVTPALTQNLNAASGWNGSTYIDAERAAGPFAILDTIYQAA EECCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCEEEEHHHCCCCHHHHHHHHHHH QKIISVDPAVSFPKLNANWSPNNIASGGDIDIALGQIGTSFYQRTTSGGTVIRNLYFLGF HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEEEEEEE ADNDTDEYDRHVVAHELGHYLQEAFARDDSVGGLHGGPDDLLDLRVAFSEGWSNGWSGIA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEEEECCCCCCCCCCEE LNNPIYSDTIGPSQASGGSFNVSVGESTNPGWFREHSVEKIFWDFSNHASIGFSQVWSTL ECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCHHEEEECCCCCCCCHHHHHHHH KTGLTVSAALSSIHSFARALANDTSNNALVASILATQSIALPATPYADNETNFGNPAIAN HHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCEECCCCCCCCCCCCCCCCEEEC INPIYLTYGSLNTALTNVCVDNAVDPYLDANKAGEYRHVRLTLPAGNRTFTVTQSSSTTN CCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCC VSDPDFVLHNNAGRLFEANGIVSNSETASWSLPAGDYVLAITDFRLFRPTSSGGNTSACF CCCCCEEEECCCCCEEECCCCCCCCCCCEEECCCCCEEEEEEEEEEECCCCCCCCCEEEE SLTVQ EEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA