Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ybaL [H]

Identifier: 91788022

GI number: 91788022

Start: 2239745

End: 2241448

Strand: Direct

Name: ybaL [H]

Synonym: Bpro_2149

Alternate gene names: 91788022

Gene position: 2239745-2241448 (Clockwise)

Preceding gene: 91788021

Following gene: 91788026

Centisome position: 43.07

GC content: 62.62

Gene sequence:

>1704_bases
ATGCCCCATAGCGTCTCCCTCATCAGCACTATCGCCGCCGGCCTGGGTCTGGCTTTGATCTTTGGCTTTGCGGCTGCACG
GCTTCGCTTGCCCGCCATCGTTGGCTATCTGCTGGCAGGGGTGATCATCGGGCCCTTCACGCCGGGTTTTGTGGCCGATA
CCGGGATTGCCAGCCAGCTTGCCGAGATTGGCGTGATGCTGCTGATGTTTGGTGTCGGTCTGCATTTTTCGCTGGATGAT
TTGCTGGCGGTACGCAAGATTGCCGTGCCCGGCGCTGTGGTGCAGATGACTGTGGCGACTGCGCTGGGTATGGGGCTGGC
GCACTGGTGGGGCTGGAACCTGGGCGGCGCGCTGGTGTTCGGGCTTTCGCTGTCGGTGGCCAGTACGGTGGTGTTGCTCC
GCGCGCTTGAGAGTCGGGGGATTCTTGATTCCGTCAACGGGCGCATTGCCGTGGGCTGGCTCGTGGTGGAAGACCTGGCC
ATGGTGCTGGTGCTGGTCTTGTTGCCGCCGCTGGGCAGCTGGCTATCTGGTAAAACCGATGCCTCCGCCGATGTCAACAT
GCTGTGGAAAACGCTGGGCATGACGATGTTGCAGGTCGGCGGTTTTGTCGCGCTGATGCTGGTCGTGGGGCGGCGGTTTT
TTCCGTGGGTGCTGTGGCATGTACAGCGCACGGGTTCGCGTGAGCTCTTTACCTTGTGCGTGGTGGCGGCAGCCGTCAGC
ATTGCGTTTGGTGCGACGGCGCTGTTTGGCGTGTCGTTTGCGCTGGGCGCATTTTTTGCCGGCATGGTGATGCGCGAGTC
CGAGTTCAGTCACCGTGCCGCAGAAGAGTCGCTGCCGCTGCGTGACGCTTTTGCGGTGCTGTTCTTTGTTTCGGTCGGCA
TGCTGTTTGACCCCTGGGTGCTTCTGGAGCGTCCGCTGCAGGTGCTGGCGGTGGTGGGCATCATCATTGTCGGCAAATCG
CTGGCGGCCGGCCTGCTCGTCGTGGCGTTTCGCTACCCGCTCAATACCGCGCTCACGGTGTCTGCCAGCCTGGCGCAGAT
CGGTGAATTTTCTTTCATCCTGGTGGCCCTGGGTGCGTCGCTTGGACTGCTGCCGCCGGAGGGGCAAAGCCTGGTGCTGG
CCGGGGCGCTGATCTCGATTGCGCTGAACCAGCTGGTCTTCAAGGCGGTTGAACCTTTTCAGCAATGGATACTGGGCAAG
TCCGCACTGGCGCGCAAACTGGAAGCACGTGACGACCCGACGGCCCAGCTGCCGGCCAGCACTGAAGCGAAGTATCTCTC
GCACCATGTGGTGCTGGTCGGTTATGGGCGGGTAGGGCGGCGCATCGCGGAGGCGCTTGGGGCCCACCACATCCCTTTTG
TCGTGGCCGAGCAAAACCGCGAGGCGGTTGAACGGCTGCGGGAGCAGGGGCTGCCTGCGGTCTCAGGTGATGCGTCGGAG
CCTGATGTGCTGATTCAGGCGCATATCGCGCAAGCCCGCATGCTGGTGATTGCCACACCTGACACGCTCGATGTGCGGCA
GATGATTGCGACGGCCCGGGCGCTTAACCCGGCGATTGAAACAGTGGTGCGCACACACAACGAGGCGGAGGCCAAGCTGC
TGGATCAGGAAAATGCTGGTAAGGTGTTTCTGGGGGAGCATGAGTTGGCACAGGCGATGACGCGCCATGTGCTGGAGCGC
TCCGCCGCCAGTGCTGCACATTAG

Upstream 100 bases:

>100_bases
TTGTTTCCTTCTGACTGTAGTAAATTAGATCGGCGCACTGCCTTGCGCGGCTTTCGTTCGCGCCCGCCTCTTCGCCTCTT
GTTGAAGGAACCCCTCCCGC

Downstream 100 bases:

>100_bases
CGGAGGCTTTTAAGCCCGCACACGAACGAAGCGCGGCGGATCACACCGCTGAACGCACCAGGTCCCTGCAGACGTGGGGT
TGCTCATGAAGCAGCGTGGT

Product: sodium/hydrogen exchanger

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 566

Protein sequence:

>567_residues
MPHSVSLISTIAAGLGLALIFGFAAARLRLPAIVGYLLAGVIIGPFTPGFVADTGIASQLAEIGVMLLMFGVGLHFSLDD
LLAVRKIAVPGAVVQMTVATALGMGLAHWWGWNLGGALVFGLSLSVASTVVLLRALESRGILDSVNGRIAVGWLVVEDLA
MVLVLVLLPPLGSWLSGKTDASADVNMLWKTLGMTMLQVGGFVALMLVVGRRFFPWVLWHVQRTGSRELFTLCVVAAAVS
IAFGATALFGVSFALGAFFAGMVMRESEFSHRAAEESLPLRDAFAVLFFVSVGMLFDPWVLLERPLQVLAVVGIIIVGKS
LAAGLLVVAFRYPLNTALTVSASLAQIGEFSFILVALGASLGLLPPEGQSLVLAGALISIALNQLVFKAVEPFQQWILGK
SALARKLEARDDPTAQLPASTEAKYLSHHVVLVGYGRVGRRIAEALGAHHIPFVVAEQNREAVERLREQGLPAVSGDASE
PDVLIQAHIAQARMLVIATPDTLDVRQMIATARALNPAIETVVRTHNEAEAKLLDQENAGKVFLGEHELAQAMTRHVLER
SAASAAH

Sequences:

>Translated_567_residues
MPHSVSLISTIAAGLGLALIFGFAAARLRLPAIVGYLLAGVIIGPFTPGFVADTGIASQLAEIGVMLLMFGVGLHFSLDD
LLAVRKIAVPGAVVQMTVATALGMGLAHWWGWNLGGALVFGLSLSVASTVVLLRALESRGILDSVNGRIAVGWLVVEDLA
MVLVLVLLPPLGSWLSGKTDASADVNMLWKTLGMTMLQVGGFVALMLVVGRRFFPWVLWHVQRTGSRELFTLCVVAAAVS
IAFGATALFGVSFALGAFFAGMVMRESEFSHRAAEESLPLRDAFAVLFFVSVGMLFDPWVLLERPLQVLAVVGIIIVGKS
LAAGLLVVAFRYPLNTALTVSASLAQIGEFSFILVALGASLGLLPPEGQSLVLAGALISIALNQLVFKAVEPFQQWILGK
SALARKLEARDDPTAQLPASTEAKYLSHHVVLVGYGRVGRRIAEALGAHHIPFVVAEQNREAVERLREQGLPAVSGDASE
PDVLIQAHIAQARMLVIATPDTLDVRQMIATARALNPAIETVVRTHNEAEAKLLDQENAGKVFLGEHELAQAMTRHVLER
SAASAAH
>Mature_566_residues
PHSVSLISTIAAGLGLALIFGFAAARLRLPAIVGYLLAGVIIGPFTPGFVADTGIASQLAEIGVMLLMFGVGLHFSLDDL
LAVRKIAVPGAVVQMTVATALGMGLAHWWGWNLGGALVFGLSLSVASTVVLLRALESRGILDSVNGRIAVGWLVVEDLAM
VLVLVLLPPLGSWLSGKTDASADVNMLWKTLGMTMLQVGGFVALMLVVGRRFFPWVLWHVQRTGSRELFTLCVVAAAVSI
AFGATALFGVSFALGAFFAGMVMRESEFSHRAAEESLPLRDAFAVLFFVSVGMLFDPWVLLERPLQVLAVVGIIIVGKSL
AAGLLVVAFRYPLNTALTVSASLAQIGEFSFILVALGASLGLLPPEGQSLVLAGALISIALNQLVFKAVEPFQQWILGKS
ALARKLEARDDPTAQLPASTEAKYLSHHVVLVGYGRVGRRIAEALGAHHIPFVVAEQNREAVERLREQGLPAVSGDASEP
DVLIQAHIAQARMLVIATPDTLDVRQMIATARALNPAIETVVRTHNEAEAKLLDQENAGKVFLGEHELAQAMTRHVLERS
AASAAH

Specific function: Unknown

COG id: COG4651

COG function: function code P; Kef-type K+ transport system, predicted NAD-binding component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI157388921, Length=380, Percent_Identity=26.5789473684211, Blast_Score=100, Evalue=3e-21,
Organism=Escherichia coli, GI1786685, Length=555, Percent_Identity=52.2522522522522, Blast_Score=519, Evalue=1e-148,
Organism=Escherichia coli, GI1789749, Length=514, Percent_Identity=29.3774319066148, Blast_Score=167, Evalue=2e-42,
Organism=Escherichia coli, GI1786232, Length=508, Percent_Identity=28.3464566929134, Blast_Score=160, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006153
- InterPro:   IPR004771
- InterPro:   IPR016040
- InterPro:   IPR003148 [H]

Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 60199; Mature: 60067

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CEEECHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PHSVSLISTIAAGLGLALIFGFAAARLRLPAIVGYLLAGVIIGPFTPGFVADTGIASQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHH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CEEECHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 7721718 [H]