| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yczJ [H]
Identifier: 91788003
GI number: 91788003
Start: 2221789
End: 2222091
Strand: Reverse
Name: yczJ [H]
Synonym: Bpro_2130
Alternate gene names: 91788003
Gene position: 2222091-2221789 (Counterclockwise)
Preceding gene: 91788004
Following gene: 91788001
Centisome position: 42.73
GC content: 58.42
Gene sequence:
>303_bases ATGATTCTCGAACTCGCCGACATCCGTATCCATCCCGGCCAGCAAGCCGCTTTTGACGAAGCCATCCAGCGCGGCCTGAC CACCGTCATCCAGAACGCCAAAGGTTTTCAGGGTTTCAAAGTCAACAAAGGCATTGAGAGCCCAGAGCGCTACATCCTCC AAATCTTCTGGGAGACGCTGGAAAATCACACCGTCGACTTCCGCCAGTCCCCGGCCTTTGCCGACTGGCGTGCCATTGTC GGGCCGTTTTTTGCCGGCCCGCCCACCGTGGAGCATTTCGACCTGCTGGCCAAATCGGCCTGA
Upstream 100 bases:
>100_bases CTGAGCTGCCAGATCAAACTCACCGACGCGCTCAACGGTTTGACGGTAGAGTTACCGATCACCCAGTATTAATTCAAGTG CCACAAAAACAGGACTTTTC
Downstream 100 bases:
>100_bases GCCAACCGTTCGACCAAAAAAAGCGGGGTTGTTCTGCCCCGCTTTTCTTTGTCTTTCTTATTTACTGCCTTCAGAATGCC ATCATTGAGATGCCATCATT
Product: antibiotic biosynthesis monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MILELADIRIHPGQQAAFDEAIQRGLTTVIQNAKGFQGFKVNKGIESPERYILQIFWETLENHTVDFRQSPAFADWRAIV GPFFAGPPTVEHFDLLAKSA
Sequences:
>Translated_100_residues MILELADIRIHPGQQAAFDEAIQRGLTTVIQNAKGFQGFKVNKGIESPERYILQIFWETLENHTVDFRQSPAFADWRAIV GPFFAGPPTVEHFDLLAKSA >Mature_100_residues MILELADIRIHPGQQAAFDEAIQRGLTTVIQNAKGFQGFKVNKGIESPERYILQIFWETLENHTVDFRQSPAFADWRAIV GPFFAGPPTVEHFDLLAKSA
Specific function: Unknown
COG id: COG2329
COG function: function code R; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007138 - InterPro: IPR011008 [H]
Pfam domain/function: PF03992 ABM [H]
EC number: NA
Molecular weight: Translated: 11270; Mature: 11270
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILELADIRIHPGQQAAFDEAIQRGLTTVIQNAKGFQGFKVNKGIESPERYILQIFWETL CEEECCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHH ENHTVDFRQSPAFADWRAIVGPFFAGPPTVEHFDLLAKSA HCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MILELADIRIHPGQQAAFDEAIQRGLTTVIQNAKGFQGFKVNKGIESPERYILQIFWETL CEEECCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHH ENHTVDFRQSPAFADWRAIVGPFFAGPPTVEHFDLLAKSA HCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]