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The map label for this gene is thcC [H]

Identifier: 91788004

GI number: 91788004

Start: 2222120

End: 2222443

Strand: Reverse

Name: thcC [H]

Synonym: Bpro_2131

Alternate gene names: 91788004

Gene position: 2222443-2222120 (Counterclockwise)

Preceding gene: 91788005

Following gene: 91788003

Centisome position: 42.74

GC content: 59.88

Gene sequence:

>324_bases
ATGATTACCATTAACTTCATAGCTTCCGACGGACAACTGACAGGGGCTACAGCCCAAACGGGCAAGAGCCTGATGCAGGC
CGCCCTGGCCGCGGGTATCGAGGGAATTGCCGCCGACTGTGGCGGGCTGATGACCTGCGCTACCTGCCATGTCCACGTGC
ACGAGCCCTTTGCCACCCGGTTGCCACCACCCGATGACGAAGAACTGGCCATGCTGGCTTTTACCGCCACACCCAGCCGG
CCCAACAGCCGCCTGAGCTGCCAGATCAAACTCACCGACGCGCTCAACGGTTTGACGGTAGAGTTACCGATCACCCAGTA
TTAA

Upstream 100 bases:

>100_bases
AAGCGGTCCGAGCTGGACCGCTATGCGCAAGCTGAAGACAAGGACGACTGGCAGCGCCGTGAATATTTCAGCCGGATTTG
AACGCCTTCTTCAACACTTC

Downstream 100 bases:

>100_bases
TTCAAGTGCCACAAAAACAGGACTTTTCATGATTCTCGAACTCGCCGACATCCGTATCCATCCCGGCCAGCAAGCCGCTT
TTGACGAAGCCATCCAGCGC

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MITINFIASDGQLTGATAQTGKSLMQAALAAGIEGIAADCGGLMTCATCHVHVHEPFATRLPPPDDEELAMLAFTATPSR
PNSRLSCQIKLTDALNGLTVELPITQY

Sequences:

>Translated_107_residues
MITINFIASDGQLTGATAQTGKSLMQAALAAGIEGIAADCGGLMTCATCHVHVHEPFATRLPPPDDEELAMLAFTATPSR
PNSRLSCQIKLTDALNGLTVELPITQY
>Mature_107_residues
MITINFIASDGQLTGATAQTGKSLMQAALAAGIEGIAADCGGLMTCATCHVHVHEPFATRLPPPDDEELAMLAFTATPSR
PNSRLSCQIKLTDALNGLTVELPITQY

Specific function: Ferredoxin-type protein which transfers electrons from rhodocoxin reductase to cytochrome CYP116 (ThcB), which is involved in the degradation of thiocarbamate herbicides [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17544202, Length=103, Percent_Identity=38.8349514563107, Blast_Score=69, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6325004, Length=104, Percent_Identity=35.5769230769231, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 11199; Mature: 11199

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITINFIASDGQLTGATAQTGKSLMQAALAAGIEGIAADCGGLMTCATCHVHVHEPFATR
CEEEEEEECCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEECCHHCC
LPPPDDEELAMLAFTATPSRPNSRLSCQIKLTDALNGLTVELPITQY
CCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEECCC
>Mature Secondary Structure
MITINFIASDGQLTGATAQTGKSLMQAALAAGIEGIAADCGGLMTCATCHVHVHEPFATR
CEEEEEEECCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEECCHHCC
LPPPDDEELAMLAFTATPSRPNSRLSCQIKLTDALNGLTVELPITQY
CCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7836301 [H]