Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is xlnD [H]

Identifier: 91788001

GI number: 91788001

Start: 2219915

End: 2221108

Strand: Reverse

Name: xlnD [H]

Synonym: Bpro_2128

Alternate gene names: 91788001

Gene position: 2221108-2219915 (Counterclockwise)

Preceding gene: 91788003

Following gene: 91788000

Centisome position: 42.71

GC content: 64.07

Gene sequence:

>1194_bases
ATGGCACAAACATCTCCCCTCATCATCTCGGGCGGCGGCATCGGCGGCCTGGCGGCGGCGCTGGTGCTGGCGCAGGATGG
CCACCCCGTCACCGTGCTGGAGCAAGCCGCCGCGTTCGGCGAAATCGGTGCCGGCATCCAGCTCGGTCCCAACATCTTCC
GGATGTTTGACTACCTGGGTTTGACCGAAGTCGTCAACCGCGTGGCATTTTTCCCGGCGGGCCTGGGCATGAACGATGTG
CGCACCGGCGAGAAGGTCATTCGCGTGGCGCTGGGCGACATGGCCCGGGCCGCCTATGGCTTTCCGTATGGCGTGATTTA
CCGCGCTGACCTGCACCAGGTGTTTCTGGATGCCTGCCGGGCGCAGCCCCATGTGACCCTGCGCACCCATGCCAAGGTCG
AGTCCTTCGACCAGTCCGAAGGGGGTGTCAGCGTGCGCCTGGCCGATGGCGAAACCGTGCACGGCAGCGCATTGATTGGC
GCCGACGGCCTCTGGAGCAGGATACGGGAAGTCGTTGTGGGTGACGGCAAGCCGCGCGTGTCGGGCCACATCGCCTACCG
CGCGGTGCTCAAGCGCGAAGACGTGCCTGCCCATTTGTGGAGTGACGACGTGCTGCTGTGGGGCGGCGAAAAAACCCACC
TGGTGCATTACCCGCTTCGCCGGGGCGAGCTGTTCAACCTGGTGGCGGTGTTCCACAGCAACAAGTACGACGAAGGCTGG
AACACCTTTGGCGACACGGCCGAGCTGAACGAGCGTTTTGCCGAGGCCTGCCCGCAGGTCAGGGAACTGCTGGGCAAGAT
CGAAACCTGGAAGATGTGGGTGTTGTGCGACCGTGAACCCGTGAAGAACTGGACCGACCGGCGCGTGACGCTGCTCGGCG
ATGCGGCCCACCCCATGCTGCAATACCTGGCCCAGGGCGCCGGCCAGGCGATCGAAGATGCCGTGGTGCTGCGCGAAGCA
TTGCGCTTTACCCGCGGCGACATCCAGAAGGCCTTTTTGAAGTACCAGCAGGCCCGCTACCTGCGCACCGGCCGGGTGCA
GCTCACAGCCCGCTTTTATGGTGACATTTACCATGCGGCGGGGGTACAGCGCGAGCTGCGCAACCAGTTGTTCCAGAGCG
GAACGGAGAGCGCCGGTTTTGCCGGGTTGAAGTGGATGTACGACGGAATCGAGCCGTCAAAACTGTTCCAATGA

Upstream 100 bases:

>100_bases
TAAATGATATGTATACTTATCATTTAGGGGCGCCCTGGTATTTCCCGGGCTATTCCCGAACCTCTCCCGAACCCTTCCCG
ATTTTCATCCTGTAAAAATC

Downstream 100 bases:

>100_bases
AAGTTTTACAGCTTCCGGAGAATCCCATGAAAACGCTTGCCGCGCTCTCCAACGCCGCCATCCGCGCTACACTTTTGATA
GCCGCCTGCACCATTCCCGC

Product: salicylate hydroxylase

Products: NA

Alternate protein names: Constitutive 3-hydroxybenzoate 6-hydroxylase [H]

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MAQTSPLIISGGGIGGLAAALVLAQDGHPVTVLEQAAAFGEIGAGIQLGPNIFRMFDYLGLTEVVNRVAFFPAGLGMNDV
RTGEKVIRVALGDMARAAYGFPYGVIYRADLHQVFLDACRAQPHVTLRTHAKVESFDQSEGGVSVRLADGETVHGSALIG
ADGLWSRIREVVVGDGKPRVSGHIAYRAVLKREDVPAHLWSDDVLLWGGEKTHLVHYPLRRGELFNLVAVFHSNKYDEGW
NTFGDTAELNERFAEACPQVRELLGKIETWKMWVLCDREPVKNWTDRRVTLLGDAAHPMLQYLAQGAGQAIEDAVVLREA
LRFTRGDIQKAFLKYQQARYLRTGRVQLTARFYGDIYHAAGVQRELRNQLFQSGTESAGFAGLKWMYDGIEPSKLFQ

Sequences:

>Translated_397_residues
MAQTSPLIISGGGIGGLAAALVLAQDGHPVTVLEQAAAFGEIGAGIQLGPNIFRMFDYLGLTEVVNRVAFFPAGLGMNDV
RTGEKVIRVALGDMARAAYGFPYGVIYRADLHQVFLDACRAQPHVTLRTHAKVESFDQSEGGVSVRLADGETVHGSALIG
ADGLWSRIREVVVGDGKPRVSGHIAYRAVLKREDVPAHLWSDDVLLWGGEKTHLVHYPLRRGELFNLVAVFHSNKYDEGW
NTFGDTAELNERFAEACPQVRELLGKIETWKMWVLCDREPVKNWTDRRVTLLGDAAHPMLQYLAQGAGQAIEDAVVLREA
LRFTRGDIQKAFLKYQQARYLRTGRVQLTARFYGDIYHAAGVQRELRNQLFQSGTESAGFAGLKWMYDGIEPSKLFQ
>Mature_396_residues
AQTSPLIISGGGIGGLAAALVLAQDGHPVTVLEQAAAFGEIGAGIQLGPNIFRMFDYLGLTEVVNRVAFFPAGLGMNDVR
TGEKVIRVALGDMARAAYGFPYGVIYRADLHQVFLDACRAQPHVTLRTHAKVESFDQSEGGVSVRLADGETVHGSALIGA
DGLWSRIREVVVGDGKPRVSGHIAYRAVLKREDVPAHLWSDDVLLWGGEKTHLVHYPLRRGELFNLVAVFHSNKYDEGWN
TFGDTAELNERFAEACPQVRELLGKIETWKMWVLCDREPVKNWTDRRVTLLGDAAHPMLQYLAQGAGQAIEDAVVLREAL
RFTRGDIQKAFLKYQQARYLRTGRVQLTARFYGDIYHAAGVQRELRNQLFQSGTESAGFAGLKWMYDGIEPSKLFQ

Specific function: Catalyzes the NAD- or NADP-dependent conversion of 3- hydroxybenzoate to gentisate. The affinity of the enzyme toward NAD is twice as high as for NADP. The enzyme shows higher specific activities against the intermediates in the degradation of 2,5- xyleno

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-hydroxybenzoate 6-hydroxylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: =1.14.13.24 [H]

Molecular weight: Translated: 43911; Mature: 43779

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTSPLIISGGGIGGLAAALVLAQDGHPVTVLEQAAAFGEIGAGIQLGPNIFRMFDYLG
CCCCCCEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEECHHHHHHHHHCC
LTEVVNRVAFFPAGLGMNDVRTGEKVIRVALGDMARAAYGFPYGVIYRADLHQVFLDACR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHC
AQPHVTLRTHAKVESFDQSEGGVSVRLADGETVHGSALIGADGLWSRIREVVVGDGKPRV
CCCCEEEEECCHHHHCCCCCCCEEEEEECCCEECCCEEECCHHHHHHHHHHHHCCCCCCC
SGHIAYRAVLKREDVPAHLWSDDVLLWGGEKTHLVHYPLRRGELFNLVAVFHSNKYDEGW
CHHHHHHHHHHCCCCCCEECCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCC
NTFGDTAELNERFAEACPQVRELLGKIETWKMWVLCDREPVKNWTDRRVTLLGDAAHPML
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHCCCCCCEEEEECCHHHHHH
QYLAQGAGQAIEDAVVLREALRFTRGDIQKAFLKYQQARYLRTGRVQLTARFYGDIYHAA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHH
GVQRELRNQLFQSGTESAGFAGLKWMYDGIEPSKLFQ
HHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHCC
>Mature Secondary Structure 
AQTSPLIISGGGIGGLAAALVLAQDGHPVTVLEQAAAFGEIGAGIQLGPNIFRMFDYLG
CCCCCEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEECHHHHHHHHHCC
LTEVVNRVAFFPAGLGMNDVRTGEKVIRVALGDMARAAYGFPYGVIYRADLHQVFLDACR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHC
AQPHVTLRTHAKVESFDQSEGGVSVRLADGETVHGSALIGADGLWSRIREVVVGDGKPRV
CCCCEEEEECCHHHHCCCCCCCEEEEEECCCEECCCEEECCHHHHHHHHHHHHCCCCCCC
SGHIAYRAVLKREDVPAHLWSDDVLLWGGEKTHLVHYPLRRGELFNLVAVFHSNKYDEGW
CHHHHHHHHHHCCCCCCEECCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCC
NTFGDTAELNERFAEACPQVRELLGKIETWKMWVLCDREPVKNWTDRRVTLLGDAAHPML
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHCCCCCCEEEEECCHHHHHH
QYLAQGAGQAIEDAVVLREALRFTRGDIQKAFLKYQQARYLRTGRVQLTARFYGDIYHAA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHH
GVQRELRNQLFQSGTESAGFAGLKWMYDGIEPSKLFQ
HHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12909360 [H]