| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is xlnD [H]
Identifier: 91788001
GI number: 91788001
Start: 2219915
End: 2221108
Strand: Reverse
Name: xlnD [H]
Synonym: Bpro_2128
Alternate gene names: 91788001
Gene position: 2221108-2219915 (Counterclockwise)
Preceding gene: 91788003
Following gene: 91788000
Centisome position: 42.71
GC content: 64.07
Gene sequence:
>1194_bases ATGGCACAAACATCTCCCCTCATCATCTCGGGCGGCGGCATCGGCGGCCTGGCGGCGGCGCTGGTGCTGGCGCAGGATGG CCACCCCGTCACCGTGCTGGAGCAAGCCGCCGCGTTCGGCGAAATCGGTGCCGGCATCCAGCTCGGTCCCAACATCTTCC GGATGTTTGACTACCTGGGTTTGACCGAAGTCGTCAACCGCGTGGCATTTTTCCCGGCGGGCCTGGGCATGAACGATGTG CGCACCGGCGAGAAGGTCATTCGCGTGGCGCTGGGCGACATGGCCCGGGCCGCCTATGGCTTTCCGTATGGCGTGATTTA CCGCGCTGACCTGCACCAGGTGTTTCTGGATGCCTGCCGGGCGCAGCCCCATGTGACCCTGCGCACCCATGCCAAGGTCG AGTCCTTCGACCAGTCCGAAGGGGGTGTCAGCGTGCGCCTGGCCGATGGCGAAACCGTGCACGGCAGCGCATTGATTGGC GCCGACGGCCTCTGGAGCAGGATACGGGAAGTCGTTGTGGGTGACGGCAAGCCGCGCGTGTCGGGCCACATCGCCTACCG CGCGGTGCTCAAGCGCGAAGACGTGCCTGCCCATTTGTGGAGTGACGACGTGCTGCTGTGGGGCGGCGAAAAAACCCACC TGGTGCATTACCCGCTTCGCCGGGGCGAGCTGTTCAACCTGGTGGCGGTGTTCCACAGCAACAAGTACGACGAAGGCTGG AACACCTTTGGCGACACGGCCGAGCTGAACGAGCGTTTTGCCGAGGCCTGCCCGCAGGTCAGGGAACTGCTGGGCAAGAT CGAAACCTGGAAGATGTGGGTGTTGTGCGACCGTGAACCCGTGAAGAACTGGACCGACCGGCGCGTGACGCTGCTCGGCG ATGCGGCCCACCCCATGCTGCAATACCTGGCCCAGGGCGCCGGCCAGGCGATCGAAGATGCCGTGGTGCTGCGCGAAGCA TTGCGCTTTACCCGCGGCGACATCCAGAAGGCCTTTTTGAAGTACCAGCAGGCCCGCTACCTGCGCACCGGCCGGGTGCA GCTCACAGCCCGCTTTTATGGTGACATTTACCATGCGGCGGGGGTACAGCGCGAGCTGCGCAACCAGTTGTTCCAGAGCG GAACGGAGAGCGCCGGTTTTGCCGGGTTGAAGTGGATGTACGACGGAATCGAGCCGTCAAAACTGTTCCAATGA
Upstream 100 bases:
>100_bases TAAATGATATGTATACTTATCATTTAGGGGCGCCCTGGTATTTCCCGGGCTATTCCCGAACCTCTCCCGAACCCTTCCCG ATTTTCATCCTGTAAAAATC
Downstream 100 bases:
>100_bases AAGTTTTACAGCTTCCGGAGAATCCCATGAAAACGCTTGCCGCGCTCTCCAACGCCGCCATCCGCGCTACACTTTTGATA GCCGCCTGCACCATTCCCGC
Product: salicylate hydroxylase
Products: NA
Alternate protein names: Constitutive 3-hydroxybenzoate 6-hydroxylase [H]
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MAQTSPLIISGGGIGGLAAALVLAQDGHPVTVLEQAAAFGEIGAGIQLGPNIFRMFDYLGLTEVVNRVAFFPAGLGMNDV RTGEKVIRVALGDMARAAYGFPYGVIYRADLHQVFLDACRAQPHVTLRTHAKVESFDQSEGGVSVRLADGETVHGSALIG ADGLWSRIREVVVGDGKPRVSGHIAYRAVLKREDVPAHLWSDDVLLWGGEKTHLVHYPLRRGELFNLVAVFHSNKYDEGW NTFGDTAELNERFAEACPQVRELLGKIETWKMWVLCDREPVKNWTDRRVTLLGDAAHPMLQYLAQGAGQAIEDAVVLREA LRFTRGDIQKAFLKYQQARYLRTGRVQLTARFYGDIYHAAGVQRELRNQLFQSGTESAGFAGLKWMYDGIEPSKLFQ
Sequences:
>Translated_397_residues MAQTSPLIISGGGIGGLAAALVLAQDGHPVTVLEQAAAFGEIGAGIQLGPNIFRMFDYLGLTEVVNRVAFFPAGLGMNDV RTGEKVIRVALGDMARAAYGFPYGVIYRADLHQVFLDACRAQPHVTLRTHAKVESFDQSEGGVSVRLADGETVHGSALIG ADGLWSRIREVVVGDGKPRVSGHIAYRAVLKREDVPAHLWSDDVLLWGGEKTHLVHYPLRRGELFNLVAVFHSNKYDEGW NTFGDTAELNERFAEACPQVRELLGKIETWKMWVLCDREPVKNWTDRRVTLLGDAAHPMLQYLAQGAGQAIEDAVVLREA LRFTRGDIQKAFLKYQQARYLRTGRVQLTARFYGDIYHAAGVQRELRNQLFQSGTESAGFAGLKWMYDGIEPSKLFQ >Mature_396_residues AQTSPLIISGGGIGGLAAALVLAQDGHPVTVLEQAAAFGEIGAGIQLGPNIFRMFDYLGLTEVVNRVAFFPAGLGMNDVR TGEKVIRVALGDMARAAYGFPYGVIYRADLHQVFLDACRAQPHVTLRTHAKVESFDQSEGGVSVRLADGETVHGSALIGA DGLWSRIREVVVGDGKPRVSGHIAYRAVLKREDVPAHLWSDDVLLWGGEKTHLVHYPLRRGELFNLVAVFHSNKYDEGWN TFGDTAELNERFAEACPQVRELLGKIETWKMWVLCDREPVKNWTDRRVTLLGDAAHPMLQYLAQGAGQAIEDAVVLREAL RFTRGDIQKAFLKYQQARYLRTGRVQLTARFYGDIYHAAGVQRELRNQLFQSGTESAGFAGLKWMYDGIEPSKLFQ
Specific function: Catalyzes the NAD- or NADP-dependent conversion of 3- hydroxybenzoate to gentisate. The affinity of the enzyme toward NAD is twice as high as for NADP. The enzyme shows higher specific activities against the intermediates in the degradation of 2,5- xyleno
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 3-hydroxybenzoate 6-hydroxylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: =1.14.13.24 [H]
Molecular weight: Translated: 43911; Mature: 43779
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTSPLIISGGGIGGLAAALVLAQDGHPVTVLEQAAAFGEIGAGIQLGPNIFRMFDYLG CCCCCCEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEECHHHHHHHHHCC LTEVVNRVAFFPAGLGMNDVRTGEKVIRVALGDMARAAYGFPYGVIYRADLHQVFLDACR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHC AQPHVTLRTHAKVESFDQSEGGVSVRLADGETVHGSALIGADGLWSRIREVVVGDGKPRV CCCCEEEEECCHHHHCCCCCCCEEEEEECCCEECCCEEECCHHHHHHHHHHHHCCCCCCC SGHIAYRAVLKREDVPAHLWSDDVLLWGGEKTHLVHYPLRRGELFNLVAVFHSNKYDEGW CHHHHHHHHHHCCCCCCEECCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCC NTFGDTAELNERFAEACPQVRELLGKIETWKMWVLCDREPVKNWTDRRVTLLGDAAHPML CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHCCCCCCEEEEECCHHHHHH QYLAQGAGQAIEDAVVLREALRFTRGDIQKAFLKYQQARYLRTGRVQLTARFYGDIYHAA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHH GVQRELRNQLFQSGTESAGFAGLKWMYDGIEPSKLFQ HHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHCC >Mature Secondary Structure AQTSPLIISGGGIGGLAAALVLAQDGHPVTVLEQAAAFGEIGAGIQLGPNIFRMFDYLG CCCCCEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEECHHHHHHHHHCC LTEVVNRVAFFPAGLGMNDVRTGEKVIRVALGDMARAAYGFPYGVIYRADLHQVFLDACR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHC AQPHVTLRTHAKVESFDQSEGGVSVRLADGETVHGSALIGADGLWSRIREVVVGDGKPRV CCCCEEEEECCHHHHCCCCCCCEEEEEECCCEECCCEEECCHHHHHHHHHHHHCCCCCCC SGHIAYRAVLKREDVPAHLWSDDVLLWGGEKTHLVHYPLRRGELFNLVAVFHSNKYDEGW CHHHHHHHHHHCCCCCCEECCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCC NTFGDTAELNERFAEACPQVRELLGKIETWKMWVLCDREPVKNWTDRRVTLLGDAAHPML CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHCCCCCCEEEEECCHHHHHH QYLAQGAGQAIEDAVVLREALRFTRGDIQKAFLKYQQARYLRTGRVQLTARFYGDIYHAA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHH GVQRELRNQLFQSGTESAGFAGLKWMYDGIEPSKLFQ HHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12909360 [H]