Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788000

Identifier: 91788000

GI number: 91788000

Start: 2218878

End: 2219888

Strand: Reverse

Name: 91788000

Synonym: Bpro_2127

Alternate gene names: NA

Gene position: 2219888-2218878 (Counterclockwise)

Preceding gene: 91788001

Following gene: 91787999

Centisome position: 42.69

GC content: 65.58

Gene sequence:

>1011_bases
ATGAAAACGCTTGCCGCGCTCTCCAACGCCGCCATCCGCGCTACACTTTTGATAGCCGCCTGCACCATTCCCGCCTGGGT
TGGAGCACAAAATAGCTCAAAAAAAGCAGAGATTGCCAACCCCTGGCCAACCCGGCCGGTCCGTATTCTGGTCGGTTTTC
CCGGTGGTTCGACGCCCGACATGGCCGCGCGCACCCTTGCCGAGCCCTTGGCCAAAGCATTGGGCCAGCCAGTCGTTGTT
GAAAACAAGCCCGGCGCTTCCGGCAACATTGCCGCCGACCAGGTGGCCAAGGCCACCGACGACCATACGCTGGGAGTCGT
CATCAACGGCAACCTGACCTCGGCCAAGCTGCTGTACCCCAAGCTGCCCTACGACCCGGCCAAAGACTTTGCCCCCATCT
CGCTGCTGACCACCGCGCCGCTGGTGTTGGTGGCGCCGGCCGGCCAGCCTGGTGGGGCCGCGTTCTTCACAGCCGCCCGC
GAGGGTGGCGGGCAGTGGAACTACGGCTCGGTGGGTAACGGCTCGGTCGCCCATCTGGGCATGGAACTGCTCAAAAGCCG
CGCGCCGGGCGTGCTGCCGGTGCATGTGCCGTTTCCGGGCAACCCGCAGGTGGTGACCGCCATGCTGGGCGGGCAGATCC
AGATGGCGCTGATCCCGCCGGGTGTGGCCATGCCGCATGTGCGTTCCGGCAAGCTCAGGGCCATTGGTCTGGCGGGTGGG
CGCTCCTCGCTGGTGCCCGACGTGCCACCGCTCTCGGAGGCAGGCTTGCAGAACGTCAACCTGGAAGTCTGGACAGCATT
GATCGGCCCGGCCCGCCTTTCCAAAGCCGCCCAGGCGCGGCTGGCGCAGGAAGTGCCTCGCATCATCCGCGACACGGACA
CGCGGCAAAAACTCTTCAACCAGGGCTGGCAGGCCGTTGGCACCTCGCCCGACGGCTTGAAGAGCCGCGTCAGGGATGAG
GCCGCCATTTTGGGCAACATCATCCAGACGCGCGGCATCAGGATCGAGTAA

Upstream 100 bases:

>100_bases
GAACGGAGAGCGCCGGTTTTGCCGGGTTGAAGTGGATGTACGACGGAATCGAGCCGTCAAAACTGTTCCAATGAAAGTTT
TACAGCTTCCGGAGAATCCC

Downstream 100 bases:

>100_bases
ATGAGGCCCCCACGTTCGCTCACTGCGTGTAGCTCTCTGCCCCCCGAGGGGGCCGCTGCGCCTGCGGCCCGGCAAAGCCG
GTTCCGCGGCCCCTGCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKTLAALSNAAIRATLLIAACTIPAWVGAQNSSKKAEIANPWPTRPVRILVGFPGGSTPDMAARTLAEPLAKALGQPVVV
ENKPGASGNIAADQVAKATDDHTLGVVINGNLTSAKLLYPKLPYDPAKDFAPISLLTTAPLVLVAPAGQPGGAAFFTAAR
EGGGQWNYGSVGNGSVAHLGMELLKSRAPGVLPVHVPFPGNPQVVTAMLGGQIQMALIPPGVAMPHVRSGKLRAIGLAGG
RSSLVPDVPPLSEAGLQNVNLEVWTALIGPARLSKAAQARLAQEVPRIIRDTDTRQKLFNQGWQAVGTSPDGLKSRVRDE
AAILGNIIQTRGIRIE

Sequences:

>Translated_336_residues
MKTLAALSNAAIRATLLIAACTIPAWVGAQNSSKKAEIANPWPTRPVRILVGFPGGSTPDMAARTLAEPLAKALGQPVVV
ENKPGASGNIAADQVAKATDDHTLGVVINGNLTSAKLLYPKLPYDPAKDFAPISLLTTAPLVLVAPAGQPGGAAFFTAAR
EGGGQWNYGSVGNGSVAHLGMELLKSRAPGVLPVHVPFPGNPQVVTAMLGGQIQMALIPPGVAMPHVRSGKLRAIGLAGG
RSSLVPDVPPLSEAGLQNVNLEVWTALIGPARLSKAAQARLAQEVPRIIRDTDTRQKLFNQGWQAVGTSPDGLKSRVRDE
AAILGNIIQTRGIRIE
>Mature_336_residues
MKTLAALSNAAIRATLLIAACTIPAWVGAQNSSKKAEIANPWPTRPVRILVGFPGGSTPDMAARTLAEPLAKALGQPVVV
ENKPGASGNIAADQVAKATDDHTLGVVINGNLTSAKLLYPKLPYDPAKDFAPISLLTTAPLVLVAPAGQPGGAAFFTAAR
EGGGQWNYGSVGNGSVAHLGMELLKSRAPGVLPVHVPFPGNPQVVTAMLGGQIQMALIPPGVAMPHVRSGKLRAIGLAGG
RSSLVPDVPPLSEAGLQNVNLEVWTALIGPARLSKAAQARLAQEVPRIIRDTDTRQKLFNQGWQAVGTSPDGLKSRVRDE
AAILGNIIQTRGIRIE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34853; Mature: 34853

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLAALSNAAIRATLLIAACTIPAWVGAQNSSKKAEIANPWPTRPVRILVGFPGGSTPD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHH
MAARTLAEPLAKALGQPVVVENKPGASGNIAADQVAKATDDHTLGVVINGNLTSAKLLYP
HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCEEEEECC
KLPYDPAKDFAPISLLTTAPLVLVAPAGQPGGAAFFTAAREGGGQWNYGSVGNGSVAHLG
CCCCCCCCCCCCEEHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHH
MELLKSRAPGVLPVHVPFPGNPQVVTAMLGGQIQMALIPPGVAMPHVRSGKLRAIGLAGG
HHHHHHCCCCEEEEECCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCEEEEEECCC
RSSLVPDVPPLSEAGLQNVNLEVWTALIGPARLSKAAQARLAQEVPRIIRDTDTRQKLFN
CCCCCCCCCCCHHHCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
QGWQAVGTSPDGLKSRVRDEAAILGNIIQTRGIRIE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKTLAALSNAAIRATLLIAACTIPAWVGAQNSSKKAEIANPWPTRPVRILVGFPGGSTPD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHH
MAARTLAEPLAKALGQPVVVENKPGASGNIAADQVAKATDDHTLGVVINGNLTSAKLLYP
HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCEEEEECC
KLPYDPAKDFAPISLLTTAPLVLVAPAGQPGGAAFFTAAREGGGQWNYGSVGNGSVAHLG
CCCCCCCCCCCCEEHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHH
MELLKSRAPGVLPVHVPFPGNPQVVTAMLGGQIQMALIPPGVAMPHVRSGKLRAIGLAGG
HHHHHHCCCCEEEEECCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCEEEEEECCC
RSSLVPDVPPLSEAGLQNVNLEVWTALIGPARLSKAAQARLAQEVPRIIRDTDTRQKLFN
CCCCCCCCCCCHHHCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
QGWQAVGTSPDGLKSRVRDEAAILGNIIQTRGIRIE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9583950; 12910271 [H]