Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787999

Identifier: 91787999

GI number: 91787999

Start: 2216917

End: 2218296

Strand: Reverse

Name: 91787999

Synonym: Bpro_2126

Alternate gene names: NA

Gene position: 2218296-2216917 (Counterclockwise)

Preceding gene: 91788000

Following gene: 91787998

Centisome position: 42.66

GC content: 64.78

Gene sequence:

>1380_bases
TTGAACTTCATCACCGAACCCGCTCGCACCCTGCCCGTCTATGGCGAATTTGACGTGGTCGTGGTGGGCGGCGGCCCTGC
CGGCCTGGCGGCCAGCGTGAGTGCCGCAAAGCATGGCGCACGCACCCTGCTGGTGGAGCGCTACGGCTTCCTGGGCGGCA
TGGGCACGGCGGGCGGCGTCACCAATTTTGCGGGCCTGTATGGTCGCAAAAATGGCGCCATGCAGCAGGTGGTGCATGGC
GTGGTCGATGACCTGCTGGCGCGCATCGACGCGCTGGGCGGCCTCAACGCGCCGCAGGACGGCATGCAGGGCCGCATCCG
GGTTCGCTCCTATGATGTATCGGCCTACAAATGCGCAGCCGATCAGTTGCTGCTGGCCTCGGGTGTGCAGCTGCTGTTTC
ACGCCTGGGCTGCGGCTGTGGTCATGCAAGACCGGCAGATCTGCGCGCTGGTAGTGGAAACCAAATCCGGCCGCCAGGCG
ATTCGCGCGCGGTGCTTTATCGACTGCTCGGGCGACGCCGACGTGGCGCACTTTGCCGGTGTGCCGTTTGAGCTGGGCGA
CGGGCATGGCAGTGCGCTGTTTCCCTCGACCATGTTTCGCGTTGGCCATGTAGATGCACCACGCGCACTGGCAGCAGTGG
GTGACTTCAAGGCCATCAACGCGCTGATGGCGCAAAGCCAGGTGCGCGAACCAGGCCGCTACAAATTCCCGCGCGAAGGC
GCCATTCTTCGCCCCCAGAAAAACCCGGCCGAATGGCGTGCCAACGTCACGCAAATCCGCAATGCCCAGGGCACGGCCAT
GGACGCCACTGACGCGCGCCAGCTCAGCGACGGCGAGATGGAGGGCCGGCGCCAGATCACGGAATATTTCCGCTTCCTGC
GCAACGAAGTGCCGGGCTTTGAGCAATCAGCCATCGTCGACATTGCGCCGCAGGTGGGCATACGCGAAACACGGCGGATT
CAGGGCCAGTACGCGCTGAGTGGCGAAGACATCCTTTCGTCGGCCCGCTTTGACGACACCATCGGTATCAATGCCTGGCC
GATGGAACTGCATGCCGATGGCCGCATCGACTGGCAGTTCCCGCGCAACGTGGATGCGGCCGAAGGACGCGCCTACAACG
ACCTGCCCTGGCGTATGCTGGTGCCCACCACCGTGAGCAACCTGCTGGTGGCCGGACGCTGCGCCTCCATGACCCACGAA
GGCCAGTCTGCGGCCCGCGCCAGCGGTGGCTGCTTTGTGATGGGCCAGGCGGCGGGCACGGCGGCGGCGCGGCTGAATAA
AGACCAGACTAAAGACCAGACTTTTGCCGACGTCGACATCCGGCAACTTCAGCAACTGCTCAGGCAGGACGGCGTTTACC
TCGACGAAAGCGCCGACTGA

Upstream 100 bases:

>100_bases
AACAAGCTACACGCAGTGAGCTTGGACAGGGGTGGGCTAATTCACCGCCCCCTCGAGGGGGGAACAGGCTACACGCAGTG
AGCCTGGACGGGGGTCCAAC

Downstream 100 bases:

>100_bases
GCGGCCATCGGCCAGAGAGTCAACAGGATTAAATCAGCGGCGGAACCCCCTCATGGACATGACACCTCCCCCCAAACCAG
GCCAGCCGGCCCGCGCCGAC

Product: fumarate reductase/succinate dehydrogenase flavoprotein-like protein

Products: NA

Alternate protein names: Invasion Protein IbeA; Glucose-Inhibited Division Protein A; Fumarate Reductase/Succinate Dehydrogenase Flavoprotein; Coagulation Factor 5/8 Type Domain Protein; Dihydrolipoamide Dehydrogenase; Pyridine Nucleotide-Disulphide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Invasion Protein IbeA Family Protein; Protein Involved In Invasion; FAD Dependent Oxidoreductase Domain Protein; Invasion Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family; Thiamine Biosynthesis Thi4 Protein; tRNA Uridine 5-Carboxymethylaminomethyl GidA; Pyridine Nucleotide-Disulfide Oxidoreductase

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MNFITEPARTLPVYGEFDVVVVGGGPAGLAASVSAAKHGARTLLVERYGFLGGMGTAGGVTNFAGLYGRKNGAMQQVVHG
VVDDLLARIDALGGLNAPQDGMQGRIRVRSYDVSAYKCAADQLLLASGVQLLFHAWAAAVVMQDRQICALVVETKSGRQA
IRARCFIDCSGDADVAHFAGVPFELGDGHGSALFPSTMFRVGHVDAPRALAAVGDFKAINALMAQSQVREPGRYKFPREG
AILRPQKNPAEWRANVTQIRNAQGTAMDATDARQLSDGEMEGRRQITEYFRFLRNEVPGFEQSAIVDIAPQVGIRETRRI
QGQYALSGEDILSSARFDDTIGINAWPMELHADGRIDWQFPRNVDAAEGRAYNDLPWRMLVPTTVSNLLVAGRCASMTHE
GQSAARASGGCFVMGQAAGTAAARLNKDQTKDQTFADVDIRQLQQLLRQDGVYLDESAD

Sequences:

>Translated_459_residues
MNFITEPARTLPVYGEFDVVVVGGGPAGLAASVSAAKHGARTLLVERYGFLGGMGTAGGVTNFAGLYGRKNGAMQQVVHG
VVDDLLARIDALGGLNAPQDGMQGRIRVRSYDVSAYKCAADQLLLASGVQLLFHAWAAAVVMQDRQICALVVETKSGRQA
IRARCFIDCSGDADVAHFAGVPFELGDGHGSALFPSTMFRVGHVDAPRALAAVGDFKAINALMAQSQVREPGRYKFPREG
AILRPQKNPAEWRANVTQIRNAQGTAMDATDARQLSDGEMEGRRQITEYFRFLRNEVPGFEQSAIVDIAPQVGIRETRRI
QGQYALSGEDILSSARFDDTIGINAWPMELHADGRIDWQFPRNVDAAEGRAYNDLPWRMLVPTTVSNLLVAGRCASMTHE
GQSAARASGGCFVMGQAAGTAAARLNKDQTKDQTFADVDIRQLQQLLRQDGVYLDESAD
>Mature_459_residues
MNFITEPARTLPVYGEFDVVVVGGGPAGLAASVSAAKHGARTLLVERYGFLGGMGTAGGVTNFAGLYGRKNGAMQQVVHG
VVDDLLARIDALGGLNAPQDGMQGRIRVRSYDVSAYKCAADQLLLASGVQLLFHAWAAAVVMQDRQICALVVETKSGRQA
IRARCFIDCSGDADVAHFAGVPFELGDGHGSALFPSTMFRVGHVDAPRALAAVGDFKAINALMAQSQVREPGRYKFPREG
AILRPQKNPAEWRANVTQIRNAQGTAMDATDARQLSDGEMEGRRQITEYFRFLRNEVPGFEQSAIVDIAPQVGIRETRRI
QGQYALSGEDILSSARFDDTIGINAWPMELHADGRIDWQFPRNVDAAEGRAYNDLPWRMLVPTTVSNLLVAGRCASMTHE
GQSAARASGGCFVMGQAAGTAAARLNKDQTKDQTFADVDIRQLQQLLRQDGVYLDESAD

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49547; Mature: 49547

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFITEPARTLPVYGEFDVVVVGGGPAGLAASVSAAKHGARTLLVERYGFLGGMGTAGGV
CCCCCCCHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCH
TNFAGLYGRKNGAMQQVVHGVVDDLLARIDALGGLNAPQDGMQGRIRVRSYDVSAYKCAA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHH
DQLLLASGVQLLFHAWAAAVVMQDRQICALVVETKSGRQAIRARCFIDCSGDADVAHFAG
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHEEEEEEEEECCCCCHHHHCC
VPFELGDGHGSALFPSTMFRVGHVDAPRALAAVGDFKAINALMAQSQVREPGRYKFPREG
CCEEECCCCCCEECHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC
AILRPQKNPAEWRANVTQIRNAQGTAMDATDARQLSDGEMEGRRQITEYFRFLRNEVPGF
CEECCCCCHHHHHHHHHHHCCCCCCEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
EQSAIVDIAPQVGIRETRRIQGQYALSGEDILSSARFDDTIGINAWPMELHADGRIDWQF
CCCEEEEECCCCCCCHHHHHCCCEEECHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEC
PRNVDAAEGRAYNDLPWRMLVPTTVSNLLVAGRCASMTHEGQSAARASGGCFVMGQAAGT
CCCCCHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCH
AAARLNKDQTKDQTFADVDIRQLQQLLRQDGVYLDESAD
HHHHCCCCCCCCCHHHHCCHHHHHHHHHHCCCEECCCCC
>Mature Secondary Structure
MNFITEPARTLPVYGEFDVVVVGGGPAGLAASVSAAKHGARTLLVERYGFLGGMGTAGGV
CCCCCCCHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCH
TNFAGLYGRKNGAMQQVVHGVVDDLLARIDALGGLNAPQDGMQGRIRVRSYDVSAYKCAA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHH
DQLLLASGVQLLFHAWAAAVVMQDRQICALVVETKSGRQAIRARCFIDCSGDADVAHFAG
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHEEEEEEEEECCCCCHHHHCC
VPFELGDGHGSALFPSTMFRVGHVDAPRALAAVGDFKAINALMAQSQVREPGRYKFPREG
CCEEECCCCCCEECHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC
AILRPQKNPAEWRANVTQIRNAQGTAMDATDARQLSDGEMEGRRQITEYFRFLRNEVPGF
CEECCCCCHHHHHHHHHHHCCCCCCEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
EQSAIVDIAPQVGIRETRRIQGQYALSGEDILSSARFDDTIGINAWPMELHADGRIDWQF
CCCEEEEECCCCCCCHHHHHCCCEEECHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEC
PRNVDAAEGRAYNDLPWRMLVPTTVSNLLVAGRCASMTHEGQSAARASGGCFVMGQAAGT
CCCCCHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCH
AAARLNKDQTKDQTFADVDIRQLQQLLRQDGVYLDESAD
HHHHCCCCCCCCCHHHHCCHHHHHHHHHHCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA