| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787999
Identifier: 91787999
GI number: 91787999
Start: 2216917
End: 2218296
Strand: Reverse
Name: 91787999
Synonym: Bpro_2126
Alternate gene names: NA
Gene position: 2218296-2216917 (Counterclockwise)
Preceding gene: 91788000
Following gene: 91787998
Centisome position: 42.66
GC content: 64.78
Gene sequence:
>1380_bases TTGAACTTCATCACCGAACCCGCTCGCACCCTGCCCGTCTATGGCGAATTTGACGTGGTCGTGGTGGGCGGCGGCCCTGC CGGCCTGGCGGCCAGCGTGAGTGCCGCAAAGCATGGCGCACGCACCCTGCTGGTGGAGCGCTACGGCTTCCTGGGCGGCA TGGGCACGGCGGGCGGCGTCACCAATTTTGCGGGCCTGTATGGTCGCAAAAATGGCGCCATGCAGCAGGTGGTGCATGGC GTGGTCGATGACCTGCTGGCGCGCATCGACGCGCTGGGCGGCCTCAACGCGCCGCAGGACGGCATGCAGGGCCGCATCCG GGTTCGCTCCTATGATGTATCGGCCTACAAATGCGCAGCCGATCAGTTGCTGCTGGCCTCGGGTGTGCAGCTGCTGTTTC ACGCCTGGGCTGCGGCTGTGGTCATGCAAGACCGGCAGATCTGCGCGCTGGTAGTGGAAACCAAATCCGGCCGCCAGGCG ATTCGCGCGCGGTGCTTTATCGACTGCTCGGGCGACGCCGACGTGGCGCACTTTGCCGGTGTGCCGTTTGAGCTGGGCGA CGGGCATGGCAGTGCGCTGTTTCCCTCGACCATGTTTCGCGTTGGCCATGTAGATGCACCACGCGCACTGGCAGCAGTGG GTGACTTCAAGGCCATCAACGCGCTGATGGCGCAAAGCCAGGTGCGCGAACCAGGCCGCTACAAATTCCCGCGCGAAGGC GCCATTCTTCGCCCCCAGAAAAACCCGGCCGAATGGCGTGCCAACGTCACGCAAATCCGCAATGCCCAGGGCACGGCCAT GGACGCCACTGACGCGCGCCAGCTCAGCGACGGCGAGATGGAGGGCCGGCGCCAGATCACGGAATATTTCCGCTTCCTGC GCAACGAAGTGCCGGGCTTTGAGCAATCAGCCATCGTCGACATTGCGCCGCAGGTGGGCATACGCGAAACACGGCGGATT CAGGGCCAGTACGCGCTGAGTGGCGAAGACATCCTTTCGTCGGCCCGCTTTGACGACACCATCGGTATCAATGCCTGGCC GATGGAACTGCATGCCGATGGCCGCATCGACTGGCAGTTCCCGCGCAACGTGGATGCGGCCGAAGGACGCGCCTACAACG ACCTGCCCTGGCGTATGCTGGTGCCCACCACCGTGAGCAACCTGCTGGTGGCCGGACGCTGCGCCTCCATGACCCACGAA GGCCAGTCTGCGGCCCGCGCCAGCGGTGGCTGCTTTGTGATGGGCCAGGCGGCGGGCACGGCGGCGGCGCGGCTGAATAA AGACCAGACTAAAGACCAGACTTTTGCCGACGTCGACATCCGGCAACTTCAGCAACTGCTCAGGCAGGACGGCGTTTACC TCGACGAAAGCGCCGACTGA
Upstream 100 bases:
>100_bases AACAAGCTACACGCAGTGAGCTTGGACAGGGGTGGGCTAATTCACCGCCCCCTCGAGGGGGGAACAGGCTACACGCAGTG AGCCTGGACGGGGGTCCAAC
Downstream 100 bases:
>100_bases GCGGCCATCGGCCAGAGAGTCAACAGGATTAAATCAGCGGCGGAACCCCCTCATGGACATGACACCTCCCCCCAAACCAG GCCAGCCGGCCCGCGCCGAC
Product: fumarate reductase/succinate dehydrogenase flavoprotein-like protein
Products: NA
Alternate protein names: Invasion Protein IbeA; Glucose-Inhibited Division Protein A; Fumarate Reductase/Succinate Dehydrogenase Flavoprotein; Coagulation Factor 5/8 Type Domain Protein; Dihydrolipoamide Dehydrogenase; Pyridine Nucleotide-Disulphide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Invasion Protein IbeA Family Protein; Protein Involved In Invasion; FAD Dependent Oxidoreductase Domain Protein; Invasion Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family; Thiamine Biosynthesis Thi4 Protein; tRNA Uridine 5-Carboxymethylaminomethyl GidA; Pyridine Nucleotide-Disulfide Oxidoreductase
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MNFITEPARTLPVYGEFDVVVVGGGPAGLAASVSAAKHGARTLLVERYGFLGGMGTAGGVTNFAGLYGRKNGAMQQVVHG VVDDLLARIDALGGLNAPQDGMQGRIRVRSYDVSAYKCAADQLLLASGVQLLFHAWAAAVVMQDRQICALVVETKSGRQA IRARCFIDCSGDADVAHFAGVPFELGDGHGSALFPSTMFRVGHVDAPRALAAVGDFKAINALMAQSQVREPGRYKFPREG AILRPQKNPAEWRANVTQIRNAQGTAMDATDARQLSDGEMEGRRQITEYFRFLRNEVPGFEQSAIVDIAPQVGIRETRRI QGQYALSGEDILSSARFDDTIGINAWPMELHADGRIDWQFPRNVDAAEGRAYNDLPWRMLVPTTVSNLLVAGRCASMTHE GQSAARASGGCFVMGQAAGTAAARLNKDQTKDQTFADVDIRQLQQLLRQDGVYLDESAD
Sequences:
>Translated_459_residues MNFITEPARTLPVYGEFDVVVVGGGPAGLAASVSAAKHGARTLLVERYGFLGGMGTAGGVTNFAGLYGRKNGAMQQVVHG VVDDLLARIDALGGLNAPQDGMQGRIRVRSYDVSAYKCAADQLLLASGVQLLFHAWAAAVVMQDRQICALVVETKSGRQA IRARCFIDCSGDADVAHFAGVPFELGDGHGSALFPSTMFRVGHVDAPRALAAVGDFKAINALMAQSQVREPGRYKFPREG AILRPQKNPAEWRANVTQIRNAQGTAMDATDARQLSDGEMEGRRQITEYFRFLRNEVPGFEQSAIVDIAPQVGIRETRRI QGQYALSGEDILSSARFDDTIGINAWPMELHADGRIDWQFPRNVDAAEGRAYNDLPWRMLVPTTVSNLLVAGRCASMTHE GQSAARASGGCFVMGQAAGTAAARLNKDQTKDQTFADVDIRQLQQLLRQDGVYLDESAD >Mature_459_residues MNFITEPARTLPVYGEFDVVVVGGGPAGLAASVSAAKHGARTLLVERYGFLGGMGTAGGVTNFAGLYGRKNGAMQQVVHG VVDDLLARIDALGGLNAPQDGMQGRIRVRSYDVSAYKCAADQLLLASGVQLLFHAWAAAVVMQDRQICALVVETKSGRQA IRARCFIDCSGDADVAHFAGVPFELGDGHGSALFPSTMFRVGHVDAPRALAAVGDFKAINALMAQSQVREPGRYKFPREG AILRPQKNPAEWRANVTQIRNAQGTAMDATDARQLSDGEMEGRRQITEYFRFLRNEVPGFEQSAIVDIAPQVGIRETRRI QGQYALSGEDILSSARFDDTIGINAWPMELHADGRIDWQFPRNVDAAEGRAYNDLPWRMLVPTTVSNLLVAGRCASMTHE GQSAARASGGCFVMGQAAGTAAARLNKDQTKDQTFADVDIRQLQQLLRQDGVYLDESAD
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49547; Mature: 49547
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFITEPARTLPVYGEFDVVVVGGGPAGLAASVSAAKHGARTLLVERYGFLGGMGTAGGV CCCCCCCHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCH TNFAGLYGRKNGAMQQVVHGVVDDLLARIDALGGLNAPQDGMQGRIRVRSYDVSAYKCAA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHH DQLLLASGVQLLFHAWAAAVVMQDRQICALVVETKSGRQAIRARCFIDCSGDADVAHFAG HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHEEEEEEEEECCCCCHHHHCC VPFELGDGHGSALFPSTMFRVGHVDAPRALAAVGDFKAINALMAQSQVREPGRYKFPREG CCEEECCCCCCEECHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC AILRPQKNPAEWRANVTQIRNAQGTAMDATDARQLSDGEMEGRRQITEYFRFLRNEVPGF CEECCCCCHHHHHHHHHHHCCCCCCEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCC EQSAIVDIAPQVGIRETRRIQGQYALSGEDILSSARFDDTIGINAWPMELHADGRIDWQF CCCEEEEECCCCCCCHHHHHCCCEEECHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEC PRNVDAAEGRAYNDLPWRMLVPTTVSNLLVAGRCASMTHEGQSAARASGGCFVMGQAAGT CCCCCHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCH AAARLNKDQTKDQTFADVDIRQLQQLLRQDGVYLDESAD HHHHCCCCCCCCCHHHHCCHHHHHHHHHHCCCEECCCCC >Mature Secondary Structure MNFITEPARTLPVYGEFDVVVVGGGPAGLAASVSAAKHGARTLLVERYGFLGGMGTAGGV CCCCCCCHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCH TNFAGLYGRKNGAMQQVVHGVVDDLLARIDALGGLNAPQDGMQGRIRVRSYDVSAYKCAA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHH DQLLLASGVQLLFHAWAAAVVMQDRQICALVVETKSGRQAIRARCFIDCSGDADVAHFAG HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHEEEEEEEEECCCCCHHHHCC VPFELGDGHGSALFPSTMFRVGHVDAPRALAAVGDFKAINALMAQSQVREPGRYKFPREG CCEEECCCCCCEECHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC AILRPQKNPAEWRANVTQIRNAQGTAMDATDARQLSDGEMEGRRQITEYFRFLRNEVPGF CEECCCCCHHHHHHHHHHHCCCCCCEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCC EQSAIVDIAPQVGIRETRRIQGQYALSGEDILSSARFDDTIGINAWPMELHADGRIDWQF CCCEEEEECCCCCCCHHHHHCCCEEECHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEC PRNVDAAEGRAYNDLPWRMLVPTTVSNLLVAGRCASMTHEGQSAARASGGCFVMGQAAGT CCCCCHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCH AAARLNKDQTKDQTFADVDIRQLQQLLRQDGVYLDESAD HHHHCCCCCCCCCHHHHCCHHHHHHHHHHCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA