| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91787998
Identifier: 91787998
GI number: 91787998
Start: 2215770
End: 2216864
Strand: Reverse
Name: 91787998
Synonym: Bpro_2125
Alternate gene names: NA
Gene position: 2216864-2215770 (Counterclockwise)
Preceding gene: 91787999
Following gene: 91787997
Centisome position: 42.63
GC content: 64.38
Gene sequence:
>1095_bases ATGGACATGACACCTCCCCCCAAACCAGGCCAGCCGGCCCGCGCCGACAACGCGGCGCGCAAGGCCTTCTATGACGCCAT CTCGTCCCACAGCATGACGCCGCTGTGGGAGGTGCTGCACGCGCTGGTGCCACCGTCCCCCACGACGCCATGCCAGCCCG CGCTCTGGAAATACGCCGAGGTACACCCGTTCCTGATGCAGGCGGGCCAGCTTATCACCGCCGAAGAGGCGGTGCGCCGG GTGCTGATCCTGGAAAACCCCGGCCTGCGCGGGCAGTCTTGCGTGACCCAGTCGCTTTATGCCGGCCTGCAGGTCATCAT GCCGGGCGAAGTCGCGCCCAGCCACCGGCACACGCAAAGCGCACTGCGCTTTGTCGTCGAAGGCCAGGGCGCCTACACCG CGGTAGACGGCGAGCGCACACAGATGAAGCCAGGCGATTTCATCATCACCCCGAGCTGGACATGGCACGACCATGGCCAC CCCGGCCATGTGGAATCGGATGCACCCGTGGTCTGGCTGGATGGCCTGGACATCCCCATGCTGCGCTTCTTTGACGCCGG CTTTGCGGAAAACGGCAGCGCCAAACAGCAAGCCGTGACCAAGGCTGAAGGCATCAGCTACCAGCGCTACGGCGCCAACA TGCTGCCGGTGCGCTACGACGCGCCCTTTGGCCAGACCTCTCCGATCTTCAGCTACCCCTATGAGCGCACACGCGAGGCC CTGCACCAGCTGGAAGCCCATGCCGAGATCGATGCCTGGGACGGCACCAAGCTGCGCTATGTCAATCCGGCCACGGGCGG CTCGCCCATGCCGACCATGGCCACCTTCATGCAGCGCCTGCCGGCGGGCTTTGAAGGCAAGCCCTGGCGCCAGACCGATG GGGCCGTATTCAGCGTGGTGGAAGGCCACGGCAGCGTCACCATCGAGCGCAATGGCCAATCCTGGACATTCGACTTTGGC CCGCGCGACCATTTTGTGATTCCGTCGTGGCACACTGCCCAACTGCACTCGCAGCAAGGTTGTGTGCTGTTCAGTTTTTC AGACCGCCCGGTGCATCAGGCCTTGGGCATACACAAAGAGGAAAGGTTGTCATGA
Upstream 100 bases:
>100_bases CAACTGCTCAGGCAGGACGGCGTTTACCTCGACGAAAGCGCCGACTGAGCGGCCATCGGCCAGAGAGTCAACAGGATTAA ATCAGCGGCGGAACCCCCTC
Downstream 100 bases:
>100_bases GTTTTGTATTTACCCCGCCCGCCACGGTTTCCGTACCCGTTGTGGGAGTCAAAGAACGCTTTCCCGTCCACCGCATTTAC TGCGTGGGCCGCAACTACGA
Product: gentisate 1,2-dioxygenase
Products: maleylpyruvate
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Barrel; Gentisate 1 2-Dioxygenase Oxidoreductase; Cupin 2 Conserved Barrel Domain-Containing Protein; 1 2-Dioxygenase; Dioxygenase Oxidoreductase Protein; Gentisate 1 2-Dioxygenase Oxidoreductase Protein; Dioxygenase; Cupin 2 Protein; 1-Hydroxy-2-Naphthoate Dioxygenase
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MDMTPPPKPGQPARADNAARKAFYDAISSHSMTPLWEVLHALVPPSPTTPCQPALWKYAEVHPFLMQAGQLITAEEAVRR VLILENPGLRGQSCVTQSLYAGLQVIMPGEVAPSHRHTQSALRFVVEGQGAYTAVDGERTQMKPGDFIITPSWTWHDHGH PGHVESDAPVVWLDGLDIPMLRFFDAGFAENGSAKQQAVTKAEGISYQRYGANMLPVRYDAPFGQTSPIFSYPYERTREA LHQLEAHAEIDAWDGTKLRYVNPATGGSPMPTMATFMQRLPAGFEGKPWRQTDGAVFSVVEGHGSVTIERNGQSWTFDFG PRDHFVIPSWHTAQLHSQQGCVLFSFSDRPVHQALGIHKEERLS
Sequences:
>Translated_364_residues MDMTPPPKPGQPARADNAARKAFYDAISSHSMTPLWEVLHALVPPSPTTPCQPALWKYAEVHPFLMQAGQLITAEEAVRR VLILENPGLRGQSCVTQSLYAGLQVIMPGEVAPSHRHTQSALRFVVEGQGAYTAVDGERTQMKPGDFIITPSWTWHDHGH PGHVESDAPVVWLDGLDIPMLRFFDAGFAENGSAKQQAVTKAEGISYQRYGANMLPVRYDAPFGQTSPIFSYPYERTREA LHQLEAHAEIDAWDGTKLRYVNPATGGSPMPTMATFMQRLPAGFEGKPWRQTDGAVFSVVEGHGSVTIERNGQSWTFDFG PRDHFVIPSWHTAQLHSQQGCVLFSFSDRPVHQALGIHKEERLS >Mature_364_residues MDMTPPPKPGQPARADNAARKAFYDAISSHSMTPLWEVLHALVPPSPTTPCQPALWKYAEVHPFLMQAGQLITAEEAVRR VLILENPGLRGQSCVTQSLYAGLQVIMPGEVAPSHRHTQSALRFVVEGQGAYTAVDGERTQMKPGDFIITPSWTWHDHGH PGHVESDAPVVWLDGLDIPMLRFFDAGFAENGSAKQQAVTKAEGISYQRYGANMLPVRYDAPFGQTSPIFSYPYERTREA LHQLEAHAEIDAWDGTKLRYVNPATGGSPMPTMATFMQRLPAGFEGKPWRQTDGAVFSVVEGHGSVTIERNGQSWTFDFG PRDHFVIPSWHTAQLHSQQGCVLFSFSDRPVHQALGIHKEERLS
Specific function: Unknown
COG id: COG3435
COG function: function code Q; Gentisate 1,2-dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.13.11.4
Molecular weight: Translated: 40332; Mature: 40332
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMTPPPKPGQPARADNAARKAFYDAISSHSMTPLWEVLHALVPPSPTTPCQPALWKYAE CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHH VHPFLMQAGQLITAEEAVRRVLILENPGLRGQSCVTQSLYAGLQVIMPGEVAPSHRHTQS CCHHHHHCCCEEEHHHHHCEEEEEECCCCCCHHHHHHHHHCCEEEEECCCCCCCHHHHHH ALRFVVEGQGAYTAVDGERTQMKPGDFIITPSWTWHDHGHPGHVESDAPVVWLDGLDIPM HHEEEEECCCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCHH LRFFDAGFAENGSAKQQAVTKAEGISYQRYGANMLPVRYDAPFGQTSPIFSYPYERTREA HHHHCCCCCCCCCHHHHHHHHHHCCEEHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHH LHQLEAHAEIDAWDGTKLRYVNPATGGSPMPTMATFMQRLPAGFEGKPWRQTDGAVFSVV HHHHHHCCCEECCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE EGHGSVTIERNGQSWTFDFGPRDHFVIPSWHTAQLHSQQGCVLFSFSDRPVHQALGIHKE ECCCEEEEEECCCEEEEECCCCCCEEECCCCHHHHHCCCCEEEEEECCCCHHHHHCCCHH ERLS HHCC >Mature Secondary Structure MDMTPPPKPGQPARADNAARKAFYDAISSHSMTPLWEVLHALVPPSPTTPCQPALWKYAE CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHH VHPFLMQAGQLITAEEAVRRVLILENPGLRGQSCVTQSLYAGLQVIMPGEVAPSHRHTQS CCHHHHHCCCEEEHHHHHCEEEEEECCCCCCHHHHHHHHHCCEEEEECCCCCCCHHHHHH ALRFVVEGQGAYTAVDGERTQMKPGDFIITPSWTWHDHGHPGHVESDAPVVWLDGLDIPM HHEEEEECCCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCHH LRFFDAGFAENGSAKQQAVTKAEGISYQRYGANMLPVRYDAPFGQTSPIFSYPYERTREA HHHHCCCCCCCCCHHHHHHHHHHCCEEHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHH LHQLEAHAEIDAWDGTKLRYVNPATGGSPMPTMATFMQRLPAGFEGKPWRQTDGAVFSVV HHHHHHCCCEECCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE EGHGSVTIERNGQSWTFDFGPRDHFVIPSWHTAQLHSQQGCVLFSFSDRPVHQALGIHKE ECCCEEEEEECCCEEEEECCCCCCEEECCCCHHHHHCCCCEEEEEECCCCHHHHHCCCHH ERLS HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2,5-dihydroxybenzoate; O2
Specific reaction: 2,5-dihydroxybenzoate + O2 = maleylpyruvate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA