Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787964

Identifier: 91787964

GI number: 91787964

Start: 2177514

End: 2179091

Strand: Direct

Name: 91787964

Synonym: Bpro_2091

Alternate gene names: NA

Gene position: 2177514-2179091 (Clockwise)

Preceding gene: 91787963

Following gene: 91787965

Centisome position: 41.87

GC content: 62.86

Gene sequence:

>1578_bases
ATGAGCGCCGCCGACTGGCTCACTCGAAGTGTTTCCAAGTTGCGGGTTGTGCCCGACGCCGGAGCGAAAATGTCATCCGA
AAAATCACCAAACTCCGCTGCCGAGTCCACGGCGCCAGCAACACCAAAAGCATCGACAACACCAACAGCGCCAACGGCGC
CGAAGGCCTCTCCGGCGCCTGCTGCGCGGGCCGGTGTGCCGGCAGCGGGCGATGCCCGAACCCCGCCCCCGGTTGCCGGC
CGTTCGACCCGAGAGCGGCTTAATGCCACGCTGCGGCACAAGGAGGAGGCACTCTCGCCGCGCGTCTTGCGCCGGACGCT
GGAGGAGCTGAAGGCGATCGTGGATCCGCAGGTCAGCGAGGTTGAAGGCGGGCGCCGAGCCAAGGGTGTTGCCGGCTGGT
ATGCCGGCGCCGCCTTGAATGAGCGGCGCGACATGTGGCTCCTGATGAGCGAGCAGTTTGTTGCCGACGCCCAGAAGGTC
AAGCTCGCACAAGCCCAGTTTGCCGCCGCCGTCGGAACGCCTGACGAGGCCGTTGCCGAGGTGCGCTATCGCCGTGCCAC
GGTGTCACCGCGCAGACGCCTGCTCCAGCGCTTCAGCGCGTTCCCGGAAGGCATCCGCTTTCTGGTGGATTTGCGAGCCG
ACATGCTGCCCTACCTGAAGGCCGACAAGCGCCTGCAGGCGCTGGATGTCGAGATGGAGTACATGTTCTCCACCTGGTTC
GACGTCGGCTTCCTTGACCTGCGCCGCATCAGCTGGGATTCCCCGGCATCCCTGATTGAAAAACTGATCAAGTACGAGGC
GGTGCACGACATCAAGAGCTGGGCCGATGTGAAGAACCGGCTTGACTCTGACCGCCGCTGCTATGGCTTCTTCCATCCGC
GCCTGCCCGACGAGCCGCTGATATTTGTGGAAGTCGCGTTGATCGATGCCATGTCCCACAGCATCACGCCGCTGCTGGAC
GAGTCGGCCGACGCGGTGGACGTGAACAAGGCGACCACGGCGATTTTTTATTCCATCAGCAACACACAGGCTGGTTTGCG
CGGCGTGAGCTTTGGCGACTCCCTGATCAAGCGGGTTGTGGAGACCCTGAAGGAAGAGTTTCCGCGGCTCAGGACGTTTG
CCACGCTCTCGCCGATTCCGGGCTTCAGGAGCTGGCTTGCCAAGAACGCTGGCGCCATGCTGGAGAGCCTGGGCGAGAAG
GATAGGGTGGCGCTGGGCCGTGCCGTGGGGTTTGAGCCGCCGGGGGTTGGGCATTTTCTCAGCGCTGCAGAGGGTGCCCT
GACCTTGCATGAAAAATCACCGGTGCGACTGATGCTGCTGCGATGCGCTGCGCATTACCTGGGCCGTGCTCTGGATGACG
GCAAACCGCTCGATGCGGTAGCGCGCTTTCACCTCGGCAATGGCGCCCGTATTGAACGGCTCAACTGGGCAGGAGATCCT
TCGCCCAAAGGGCTCAAGCAGTCGTATGGCCTGATGGTGAATTACCTCTACGACCTCAAGCGCCTGGACAAGCACCGCGC
CATGCTGGCACAGGGGAAAATCCCCGTATCAGGGGAGGTCGAAGATTTGTACATTTGA

Upstream 100 bases:

>100_bases
GCGACAGCGAAGGGGCGGAGGCCGCCATGCGCACCCACCTGACGCGCCAGCGTGAAGCGCTGCGCGGCCTGGCTGCCAAC
CAGCGTTCGAGGTTGGCATC

Downstream 100 bases:

>100_bases
ATGTGTACTTAACATCGATTCCGCACGTCGATTCAGCACATCGATTCCGTATTTTCAGATTCAACAACGTTCAACAACGA
CAGGAGACAAAATGACATTC

Product: malonyl-CoA decarboxylase

Products: NA

Alternate protein names: Malonyl-CoA Decarboxylase Superfamily; Malonyl-CoA Decarboxylase Protein; Malonyl-CoA Decarboxylase Superfamily Protein; MCD Malonyl-CoA Decarboxylase MCD; Malonyl-CoA Decarboxylase Family Protein; Decarboxylase

Number of amino acids: Translated: 525; Mature: 524

Protein sequence:

>525_residues
MSAADWLTRSVSKLRVVPDAGAKMSSEKSPNSAAESTAPATPKASTTPTAPTAPKASPAPAARAGVPAAGDARTPPPVAG
RSTRERLNATLRHKEEALSPRVLRRTLEELKAIVDPQVSEVEGGRRAKGVAGWYAGAALNERRDMWLLMSEQFVADAQKV
KLAQAQFAAAVGTPDEAVAEVRYRRATVSPRRRLLQRFSAFPEGIRFLVDLRADMLPYLKADKRLQALDVEMEYMFSTWF
DVGFLDLRRISWDSPASLIEKLIKYEAVHDIKSWADVKNRLDSDRRCYGFFHPRLPDEPLIFVEVALIDAMSHSITPLLD
ESADAVDVNKATTAIFYSISNTQAGLRGVSFGDSLIKRVVETLKEEFPRLRTFATLSPIPGFRSWLAKNAGAMLESLGEK
DRVALGRAVGFEPPGVGHFLSAAEGALTLHEKSPVRLMLLRCAAHYLGRALDDGKPLDAVARFHLGNGARIERLNWAGDP
SPKGLKQSYGLMVNYLYDLKRLDKHRAMLAQGKIPVSGEVEDLYI

Sequences:

>Translated_525_residues
MSAADWLTRSVSKLRVVPDAGAKMSSEKSPNSAAESTAPATPKASTTPTAPTAPKASPAPAARAGVPAAGDARTPPPVAG
RSTRERLNATLRHKEEALSPRVLRRTLEELKAIVDPQVSEVEGGRRAKGVAGWYAGAALNERRDMWLLMSEQFVADAQKV
KLAQAQFAAAVGTPDEAVAEVRYRRATVSPRRRLLQRFSAFPEGIRFLVDLRADMLPYLKADKRLQALDVEMEYMFSTWF
DVGFLDLRRISWDSPASLIEKLIKYEAVHDIKSWADVKNRLDSDRRCYGFFHPRLPDEPLIFVEVALIDAMSHSITPLLD
ESADAVDVNKATTAIFYSISNTQAGLRGVSFGDSLIKRVVETLKEEFPRLRTFATLSPIPGFRSWLAKNAGAMLESLGEK
DRVALGRAVGFEPPGVGHFLSAAEGALTLHEKSPVRLMLLRCAAHYLGRALDDGKPLDAVARFHLGNGARIERLNWAGDP
SPKGLKQSYGLMVNYLYDLKRLDKHRAMLAQGKIPVSGEVEDLYI
>Mature_524_residues
SAADWLTRSVSKLRVVPDAGAKMSSEKSPNSAAESTAPATPKASTTPTAPTAPKASPAPAARAGVPAAGDARTPPPVAGR
STRERLNATLRHKEEALSPRVLRRTLEELKAIVDPQVSEVEGGRRAKGVAGWYAGAALNERRDMWLLMSEQFVADAQKVK
LAQAQFAAAVGTPDEAVAEVRYRRATVSPRRRLLQRFSAFPEGIRFLVDLRADMLPYLKADKRLQALDVEMEYMFSTWFD
VGFLDLRRISWDSPASLIEKLIKYEAVHDIKSWADVKNRLDSDRRCYGFFHPRLPDEPLIFVEVALIDAMSHSITPLLDE
SADAVDVNKATTAIFYSISNTQAGLRGVSFGDSLIKRVVETLKEEFPRLRTFATLSPIPGFRSWLAKNAGAMLESLGEKD
RVALGRAVGFEPPGVGHFLSAAEGALTLHEKSPVRLMLLRCAAHYLGRALDDGKPLDAVARFHLGNGARIERLNWAGDPS
PKGLKQSYGLMVNYLYDLKRLDKHRAMLAQGKIPVSGEVEDLYI

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI110349750, Length=336, Percent_Identity=39.5833333333333, Blast_Score=221, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI71985309, Length=409, Percent_Identity=31.5403422982885, Blast_Score=226, Evalue=2e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57724; Mature: 57593

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAADWLTRSVSKLRVVPDAGAKMSSEKSPNSAAESTAPATPKASTTPTAPTAPKASPAP
CCHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC
AARAGVPAAGDARTPPPVAGRSTRERLNATLRHKEEALSPRVLRRTLEELKAIVDPQVSE
CHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHH
VEGGRRAKGVAGWYAGAALNERRDMWLLMSEQFVADAQKVKLAQAQFAAAVGTPDEAVAE
HCCCCCCCCCHHHHHCCHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VRYRRATVSPRRRLLQRFSAFPEGIRFLVDLRADMLPYLKADKRLQALDVEMEYMFSTWF
HHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
DVGFLDLRRISWDSPASLIEKLIKYEAVHDIKSWADVKNRLDSDRRCYGFFHPRLPDEPL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCE
IFVEVALIDAMSHSITPLLDESADAVDVNKATTAIFYSISNTQAGLRGVSFGDSLIKRVV
EEEHHHHHHHHHHCCCHHHCCCCCCEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHH
ETLKEEFPRLRTFATLSPIPGFRSWLAKNAGAMLESLGEKDRVALGRAVGFEPPGVGHFL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHH
SAAEGALTLHEKSPVRLMLLRCAAHYLGRALDDGKPLDAVARFHLGNGARIERLNWAGDP
HHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCC
SPKGLKQSYGLMVNYLYDLKRLDKHRAMLAQGKIPVSGEVEDLYI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCC
>Mature Secondary Structure 
SAADWLTRSVSKLRVVPDAGAKMSSEKSPNSAAESTAPATPKASTTPTAPTAPKASPAP
CHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC
AARAGVPAAGDARTPPPVAGRSTRERLNATLRHKEEALSPRVLRRTLEELKAIVDPQVSE
CHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHH
VEGGRRAKGVAGWYAGAALNERRDMWLLMSEQFVADAQKVKLAQAQFAAAVGTPDEAVAE
HCCCCCCCCCHHHHHCCHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VRYRRATVSPRRRLLQRFSAFPEGIRFLVDLRADMLPYLKADKRLQALDVEMEYMFSTWF
HHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
DVGFLDLRRISWDSPASLIEKLIKYEAVHDIKSWADVKNRLDSDRRCYGFFHPRLPDEPL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCE
IFVEVALIDAMSHSITPLLDESADAVDVNKATTAIFYSISNTQAGLRGVSFGDSLIKRVV
EEEHHHHHHHHHHCCCHHHCCCCCCEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHH
ETLKEEFPRLRTFATLSPIPGFRSWLAKNAGAMLESLGEKDRVALGRAVGFEPPGVGHFL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHH
SAAEGALTLHEKSPVRLMLLRCAAHYLGRALDDGKPLDAVARFHLGNGARIERLNWAGDP
HHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCC
SPKGLKQSYGLMVNYLYDLKRLDKHRAMLAQGKIPVSGEVEDLYI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA