| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787965
Identifier: 91787965
GI number: 91787965
Start: 2179183
End: 2180178
Strand: Direct
Name: 91787965
Synonym: Bpro_2092
Alternate gene names: NA
Gene position: 2179183-2180178 (Clockwise)
Preceding gene: 91787964
Following gene: 91787966
Centisome position: 41.91
GC content: 62.25
Gene sequence:
>996_bases ATGACATTCAGCCTTGGAAAGGGTTCGCGGCGCGACGTGCTGCGCGCCACCGCCGCCAGTGTTGCCTTATTTGCCATCAA CAGCCATGCCCAGTCGGGCTGGCCCACCAAGCCGGTAACGGTGGTGGTGCCTTTTCCCGCCGGTGGTGGAACCGATGCAT TTGCCCGGCCGCTCTCGGGGCAGTTTGCCAAGCTGACAGGCAAACAGCTGATCGTTGACAACCGCGGTGGCGCCGGTGGC ACGCTGGGTGCCAGCATTGCGGCGAAGGCCGCGCCTGATGGTTACACCCTGTTCATGGGCGCCGTCCATCACACCATTGC GCCTTCCATGTACCCGAAGCTGGACTACGACCTTGAGAAGGATTTTGTGCCGCTGGCCCTGATGGCCAATGTGCCGCAGG TGGTGGTGATCAATCCGAAGCGGGCGGAAACGCAGAACATCAAGGCGTTCATAGAGTACGCACGCAAGAACCCCGGCAAG CTCAACTACGGCTCTGCCGGCGCGGGCACCTCGCATCACCTGGCCGGCGAGTTGTTCAAGCAGCAGACCAAGACTTTCAT CACGCACATTCCTTACCGTGGTGCAGGCCCGGCCCTGCAAGACCTGATCTCCGGCAATGTGGACGTGATGTTTGACGGCC TGGGTTCCTCTGCAGCCCACATCAAGGGAGGCCGCATCAAGGCGTTGATGGTCTCTGGCAGCAAGCGCAACCCGGCCTTT CCGGATGTGCCCAGCGCCGCCGAGGTCGGCCTGCCGGATTACACCGTGACCACCTGGTACGGTCTGTGGGCGCCGAAAGG CACGCCCGCCGATATTCAGGCGCGCATCGTTGAAGAATTGCGCAAGGCCGCAGCCAGCGACGAACTCAAGGCCATCTGGG CCAGCAATGGTGCGGAGTTCGGCAACCTGACACCGCAGCAGTTCGGTGCTTTTGTTCATGCGGAAATCCAGCGCTGGGCG GCCGTGGTCAAGACATCGGGCGCCAAGCTCGAATAG
Upstream 100 bases:
>100_bases TACATTTGAATGTGTACTTAACATCGATTCCGCACGTCGATTCAGCACATCGATTCCGTATTTTCAGATTCAACAACGTT CAACAACGACAGGAGACAAA
Downstream 100 bases:
>100_bases ATATGGCCCCCACGCTTTTCACTTCGTGTAATGCGCTGCCCCCCGAGGGGGCTAATTTTCCTAGGGGCTGCCCGTCGGAA AATTGCATACTTCCCACACT
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MTFSLGKGSRRDVLRATAASVALFAINSHAQSGWPTKPVTVVVPFPAGGGTDAFARPLSGQFAKLTGKQLIVDNRGGAGG TLGASIAAKAAPDGYTLFMGAVHHTIAPSMYPKLDYDLEKDFVPLALMANVPQVVVINPKRAETQNIKAFIEYARKNPGK LNYGSAGAGTSHHLAGELFKQQTKTFITHIPYRGAGPALQDLISGNVDVMFDGLGSSAAHIKGGRIKALMVSGSKRNPAF PDVPSAAEVGLPDYTVTTWYGLWAPKGTPADIQARIVEELRKAAASDELKAIWASNGAEFGNLTPQQFGAFVHAEIQRWA AVVKTSGAKLE
Sequences:
>Translated_331_residues MTFSLGKGSRRDVLRATAASVALFAINSHAQSGWPTKPVTVVVPFPAGGGTDAFARPLSGQFAKLTGKQLIVDNRGGAGG TLGASIAAKAAPDGYTLFMGAVHHTIAPSMYPKLDYDLEKDFVPLALMANVPQVVVINPKRAETQNIKAFIEYARKNPGK LNYGSAGAGTSHHLAGELFKQQTKTFITHIPYRGAGPALQDLISGNVDVMFDGLGSSAAHIKGGRIKALMVSGSKRNPAF PDVPSAAEVGLPDYTVTTWYGLWAPKGTPADIQARIVEELRKAAASDELKAIWASNGAEFGNLTPQQFGAFVHAEIQRWA AVVKTSGAKLE >Mature_330_residues TFSLGKGSRRDVLRATAASVALFAINSHAQSGWPTKPVTVVVPFPAGGGTDAFARPLSGQFAKLTGKQLIVDNRGGAGGT LGASIAAKAAPDGYTLFMGAVHHTIAPSMYPKLDYDLEKDFVPLALMANVPQVVVINPKRAETQNIKAFIEYARKNPGKL NYGSAGAGTSHHLAGELFKQQTKTFITHIPYRGAGPALQDLISGNVDVMFDGLGSSAAHIKGGRIKALMVSGSKRNPAFP DVPSAAEVGLPDYTVTTWYGLWAPKGTPADIQARIVEELRKAAASDELKAIWASNGAEFGNLTPQQFGAFVHAEIQRWAA VVKTSGAKLE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34937; Mature: 34806
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSLGKGSRRDVLRATAASVALFAINSHAQSGWPTKPVTVVVPFPAGGGTDAFARPLSG CCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCC QFAKLTGKQLIVDNRGGAGGTLGASIAAKAAPDGYTLFMGAVHHTIAPSMYPKLDYDLEK CHHHCCCCEEEEECCCCCCCCCCHHHHHCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCC DFVPLALMANVPQVVVINPKRAETQNIKAFIEYARKNPGKLNYGSAGAGTSHHLAGELFK CCCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH QQTKTFITHIPYRGAGPALQDLISGNVDVMFDGLGSSAAHIKGGRIKALMVSGSKRNPAF HHHHHHHHCCCCCCCCHHHHHHHCCCEEEEEECCCCCCEEECCCEEEEEEEECCCCCCCC PDVPSAAEVGLPDYTVTTWYGLWAPKGTPADIQARIVEELRKAAASDELKAIWASNGAEF CCCCCHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHEEEECCCCCCC GNLTPQQFGAFVHAEIQRWAAVVKTSGAKLE CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TFSLGKGSRRDVLRATAASVALFAINSHAQSGWPTKPVTVVVPFPAGGGTDAFARPLSG CCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCC QFAKLTGKQLIVDNRGGAGGTLGASIAAKAAPDGYTLFMGAVHHTIAPSMYPKLDYDLEK CHHHCCCCEEEEECCCCCCCCCCHHHHHCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCC DFVPLALMANVPQVVVINPKRAETQNIKAFIEYARKNPGKLNYGSAGAGTSHHLAGELFK CCCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH QQTKTFITHIPYRGAGPALQDLISGNVDVMFDGLGSSAAHIKGGRIKALMVSGSKRNPAF HHHHHHHHCCCCCCCCHHHHHHHCCCEEEEEECCCCCCEEECCCEEEEEEEECCCCCCCC PDVPSAAEVGLPDYTVTTWYGLWAPKGTPADIQARIVEELRKAAASDELKAIWASNGAEF CCCCCHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHEEEECCCCCCC GNLTPQQFGAFVHAEIQRWAAVVKTSGAKLE CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]