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The map label for this gene is yodT [H]

Identifier: 91787879

GI number: 91787879

Start: 2071448

End: 2072788

Strand: Direct

Name: yodT [H]

Synonym: Bpro_2003

Alternate gene names: 91787879

Gene position: 2071448-2072788 (Clockwise)

Preceding gene: 91787878

Following gene: 91787880

Centisome position: 39.83

GC content: 63.46

Gene sequence:

>1341_bases
ATGGCCACAGTTCCTACCCATGTATTTCACCGGAACTTGCAGAACACGCCACCGGTGGCGGTCAGCGGGCAGGGTGTTTA
CCTGACCGATGCACAAGGCAAAAGGTATATCGACGCTTCCGGCGGCGCAGCGGTGTCGTGCCTGGGGCATGGGCATCCGG
ACGTGCTGGCCGCCATGCATGCGCAGATCGACAAGCTGGCTTATGCGCACACCAGTTTTTTCACCACCGAAGTGGCCGAA
GCCCTGGCCGACAAGCTGATCCAGACGGCACCGCAAGGCATGAGCCATGTGTATTTCGTCAGCGGCGGCTCGGAGGCGAT
GGAGGCTGCCCTCAAAATGGCGCGCCAGTATTTTGTCGAGATCGGCCAGCCGCAGCGTCAGCACTTCATCGCGCGCCGGC
AGAGCTACCACGGCAATACCCTGGGTGCGCTGGCCATTGGCGGCAACCCCTGGCGGCGCGAGCCGTTTGCCCCCATCCTG
ATAGAGGCCACCCATCTGTCGCCCTGCTACCCCTACCGCGAGCAGCAGGCCGGCGAGACGCCCGGGCAGTATGGCTTGCG
TCTGGCACAGGAGCTGGAGCAGGCTATTTTTGAAAAAGGCGCGGACCGTGTGATTGCCTTTGTTGCGGAAACCGTGGGTG
GCGCAACCGCCGGCGTGTTGGCGCCCGTGCCCGGCTACTTCAAGGCGGTGCGCGAGGTCTGCGACCGCTACGGCGTGTTG
CTGATACTCGATGAAGTCATGTGCGGTATGGGCCGCACCGGCACATTACATGCCTGCGAGCAGGAGGGTGTGCTGCCCGA
TCTGCTGGCGGTGGCCAAGGGGCTGGGCGGTGGTTACCAGCCGATTGGTGCGGTGCTGGCTCAGGCCAACATTGTCGATG
CGATGCGTGATGGTTCCGGCTTTTTTCAGCACGGCCACACCTACCTGGGTCACGCGGTAGCGTGTGCGGCGGCGCTGGCC
GTGCAGCAGGTGATTGAGCGGGACCAACTGCTGGCGCAGGTGCGTGTGCGCGGCGGGTTTTTGCAGCAGCTGATGCGCAG
CAACTGGGGCGAACATCCCCATGTGGGGGACATCCGGGGGCGCGGCCTGTTCTGGGGCATCGAGCTGGTGCAGGAGCGTG
CCAGCAAGACACCGTTTGACCCGGCACGCAAGCTGCATGCACGGATCAAGCAGGAGGCGATGGCGCGTGGCTTGATGGTT
TACCCGATGGGCGGCACCGTTGATGGTCGTTATGGTGATCATGTTTTGCTGGCGCCGCCTTTCATTGCCAGCGAAGCGGA
ACTGACCATGATGGTTGAGCGCCTGGGTTCGGCGATGGATGCCGCGATAGCGGCAGCGTAA

Upstream 100 bases:

>100_bases
GGCAAAACCGGCTGGACAACGAGGGCGCCTACTGGGACAAGCTGGCCGACAAGCCGGTGCCCGTCCATCCATTGAGTTTC
CCGGCGAGGAAATGAGTTTT

Downstream 100 bases:

>100_bases
AGATTTTTTTACAACCTGGAGAACTGAAATGAGCAAGAAGTTCGCATTGAGCGCATTGAGCGCCTTGAGCACATCGGGCG
CCGCGAGTGTCGCAAGTATT

Product: hypothetical protein

Products: L-Glutamate; L-Glutamate 5-semialdehyde [C]

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MATVPTHVFHRNLQNTPPVAVSGQGVYLTDAQGKRYIDASGGAAVSCLGHGHPDVLAAMHAQIDKLAYAHTSFFTTEVAE
ALADKLIQTAPQGMSHVYFVSGGSEAMEAALKMARQYFVEIGQPQRQHFIARRQSYHGNTLGALAIGGNPWRREPFAPIL
IEATHLSPCYPYREQQAGETPGQYGLRLAQELEQAIFEKGADRVIAFVAETVGGATAGVLAPVPGYFKAVREVCDRYGVL
LILDEVMCGMGRTGTLHACEQEGVLPDLLAVAKGLGGGYQPIGAVLAQANIVDAMRDGSGFFQHGHTYLGHAVACAAALA
VQQVIERDQLLAQVRVRGGFLQQLMRSNWGEHPHVGDIRGRGLFWGIELVQERASKTPFDPARKLHARIKQEAMARGLMV
YPMGGTVDGRYGDHVLLAPPFIASEAELTMMVERLGSAMDAAIAAA

Sequences:

>Translated_446_residues
MATVPTHVFHRNLQNTPPVAVSGQGVYLTDAQGKRYIDASGGAAVSCLGHGHPDVLAAMHAQIDKLAYAHTSFFTTEVAE
ALADKLIQTAPQGMSHVYFVSGGSEAMEAALKMARQYFVEIGQPQRQHFIARRQSYHGNTLGALAIGGNPWRREPFAPIL
IEATHLSPCYPYREQQAGETPGQYGLRLAQELEQAIFEKGADRVIAFVAETVGGATAGVLAPVPGYFKAVREVCDRYGVL
LILDEVMCGMGRTGTLHACEQEGVLPDLLAVAKGLGGGYQPIGAVLAQANIVDAMRDGSGFFQHGHTYLGHAVACAAALA
VQQVIERDQLLAQVRVRGGFLQQLMRSNWGEHPHVGDIRGRGLFWGIELVQERASKTPFDPARKLHARIKQEAMARGLMV
YPMGGTVDGRYGDHVLLAPPFIASEAELTMMVERLGSAMDAAIAAA
>Mature_445_residues
ATVPTHVFHRNLQNTPPVAVSGQGVYLTDAQGKRYIDASGGAAVSCLGHGHPDVLAAMHAQIDKLAYAHTSFFTTEVAEA
LADKLIQTAPQGMSHVYFVSGGSEAMEAALKMARQYFVEIGQPQRQHFIARRQSYHGNTLGALAIGGNPWRREPFAPILI
EATHLSPCYPYREQQAGETPGQYGLRLAQELEQAIFEKGADRVIAFVAETVGGATAGVLAPVPGYFKAVREVCDRYGVLL
ILDEVMCGMGRTGTLHACEQEGVLPDLLAVAKGLGGGYQPIGAVLAQANIVDAMRDGSGFFQHGHTYLGHAVACAAALAV
QQVIERDQLLAQVRVRGGFLQQLMRSNWGEHPHVGDIRGRGLFWGIELVQERASKTPFDPARKLHARIKQEAMARGLMVY
PMGGTVDGRYGDHVLLAPPFIASEAELTMMVERLGSAMDAAIAAA

Specific function: Unknown

COG id: COG0161

COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI37574042, Length=428, Percent_Identity=29.4392523364486, Blast_Score=166, Evalue=3e-41,
Organism=Homo sapiens, GI4557809, Length=429, Percent_Identity=29.6037296037296, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI226442705, Length=428, Percent_Identity=28.7383177570093, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI226442709, Length=397, Percent_Identity=29.4710327455919, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI24119277, Length=386, Percent_Identity=30.8290155440415, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI13994255, Length=437, Percent_Identity=28.8329519450801, Blast_Score=145, Evalue=7e-35,
Organism=Homo sapiens, GI284507298, Length=346, Percent_Identity=29.4797687861272, Blast_Score=124, Evalue=2e-28,
Organism=Escherichia coli, GI145693181, Length=347, Percent_Identity=36.5994236311239, Blast_Score=200, Evalue=2e-52,
Organism=Escherichia coli, GI1788044, Length=425, Percent_Identity=32.9411764705882, Blast_Score=190, Evalue=1e-49,
Organism=Escherichia coli, GI1789759, Length=429, Percent_Identity=33.5664335664336, Blast_Score=189, Evalue=4e-49,
Organism=Escherichia coli, GI1789016, Length=434, Percent_Identity=32.0276497695853, Blast_Score=171, Evalue=6e-44,
Organism=Escherichia coli, GI1786991, Length=443, Percent_Identity=27.765237020316, Blast_Score=152, Evalue=5e-38,
Organism=Escherichia coli, GI1787560, Length=443, Percent_Identity=30.0225733634311, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI1786349, Length=316, Percent_Identity=29.1139240506329, Blast_Score=97, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI32564660, Length=444, Percent_Identity=30.1801801801802, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI25144271, Length=416, Percent_Identity=27.6442307692308, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI71992977, Length=429, Percent_Identity=27.5058275058275, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI25144274, Length=239, Percent_Identity=31.7991631799163, Blast_Score=119, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6324432, Length=352, Percent_Identity=31.25, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6323470, Length=437, Percent_Identity=27.9176201372998, Blast_Score=135, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6324386, Length=468, Percent_Identity=23.9316239316239, Blast_Score=113, Evalue=5e-26,
Organism=Drosophila melanogaster, GI21357415, Length=423, Percent_Identity=31.4420803782506, Blast_Score=173, Evalue=3e-43,
Organism=Drosophila melanogaster, GI21356575, Length=426, Percent_Identity=32.1596244131455, Blast_Score=165, Evalue=5e-41,
Organism=Drosophila melanogaster, GI28574759, Length=445, Percent_Identity=27.6404494382022, Blast_Score=141, Evalue=9e-34,
Organism=Drosophila melanogaster, GI161085790, Length=441, Percent_Identity=27.6643990929705, Blast_Score=140, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005814
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00202 Aminotran_3 [H]

EC number: 2.6.1.13 [C]

Molecular weight: Translated: 47960; Mature: 47828

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS00600 AA_TRANSFER_CLASS_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATVPTHVFHRNLQNTPPVAVSGQGVYLTDAQGKRYIDASGGAAVSCLGHGHPDVLAAMH
CCCCCHHHHHHCCCCCCCEEECCCEEEEECCCCCEEEECCCCCEEEECCCCCHHHHHHHH
AQIDKLAYAHTSFFTTEVAEALADKLIQTAPQGMSHVYFVSGGSEAMEAALKMARQYFVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
IGQPQRQHFIARRQSYHGNTLGALAIGGNPWRREPFAPILIEATHLSPCYPYREQQAGET
CCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCC
PGQYGLRLAQELEQAIFEKGADRVIAFVAETVGGATAGVLAPVPGYFKAVREVCDRYGVL
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHCCHH
LILDEVMCGMGRTGTLHACEQEGVLPDLLAVAKGLGGGYQPIGAVLAQANIVDAMRDGSG
HHHHHHHHCCCCCCCEECCHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
FFQHGHTYLGHAVACAAALAVQQVIERDQLLAQVRVRGGFLQQLMRSNWGEHPHVGDIRG
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RGLFWGIELVQERASKTPFDPARKLHARIKQEAMARGLMVYPMGGTVDGRYGDHVLLAPP
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEECCC
FIASEAELTMMVERLGSAMDAAIAAA
CCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ATVPTHVFHRNLQNTPPVAVSGQGVYLTDAQGKRYIDASGGAAVSCLGHGHPDVLAAMH
CCCCHHHHHHCCCCCCCEEECCCEEEEECCCCCEEEECCCCCEEEECCCCCHHHHHHHH
AQIDKLAYAHTSFFTTEVAEALADKLIQTAPQGMSHVYFVSGGSEAMEAALKMARQYFVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
IGQPQRQHFIARRQSYHGNTLGALAIGGNPWRREPFAPILIEATHLSPCYPYREQQAGET
CCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCC
PGQYGLRLAQELEQAIFEKGADRVIAFVAETVGGATAGVLAPVPGYFKAVREVCDRYGVL
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHCCHH
LILDEVMCGMGRTGTLHACEQEGVLPDLLAVAKGLGGGYQPIGAVLAQANIVDAMRDGSG
HHHHHHHHCCCCCCCEECCHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
FFQHGHTYLGHAVACAAALAVQQVIERDQLLAQVRVRGGFLQQLMRSNWGEHPHVGDIRG
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RGLFWGIELVQERASKTPFDPARKLHARIKQEAMARGLMVYPMGGTVDGRYGDHVLLAPP
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEECCC
FIASEAELTMMVERLGSAMDAAIAAA
CCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-Oxoglutarate; Ornithine [C]

Specific reaction: 2-Oxoglutarate + Ornithine --> L-Glutamate + L-Glutamate 5-semialdehyde [C]

General reaction: Amino group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]