| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787878
Identifier: 91787878
GI number: 91787878
Start: 2070537
End: 2071442
Strand: Direct
Name: 91787878
Synonym: Bpro_2002
Alternate gene names: NA
Gene position: 2070537-2071442 (Clockwise)
Preceding gene: 91787877
Following gene: 91787879
Centisome position: 39.82
GC content: 66.45
Gene sequence:
>906_bases ATGACCGCCTCTTCCCTGTTTGCCAAAGTCCCGCTTGACGGCCTGAGTCCGGAGCTGCTGCGTGCCGCGCGCTGGATTGA AGCGCATCCGCGCGAGGTGGCGCTGCATTCGATGCGCGAATGTGCGCGCCGTGCCGGGCTGGCGCCAGCGACGCTGACCC GCCTTTCACAGGCGCTGGGGTTCAACGGTTTTGACGCGATCAAAAATCTTTGCCAGGAGTCTTTTGCGGCGCAGGCGGGT TACGCCGGGCGGGCCGAAGTTTTGCAGGCCAGCGCGCGGCACAGCAAGGACTGGCTGGCGGTCTTGAATGAAACCCAGCA CGCCAACACGGCGTCTATCGGCGGGCTGAACCAGCGCGGGCAGCTGGAGGCCGCGGCCGATGCAATGCTTAAAGCCCGAC GCATCTATTTTCTGGGTCTGCGCGCCAGCCACGGCCTGGCGCTGCACCTGCACTACACCTATGGTTTGTTGGCGTCCAAC GGGGTTCTGGTGCAGGGGCTGGGCGGCACGCTGAGCGACCAGATCGGCGAGATGGGCCGCGGTGATCTGCTGGTCGCGAT GTCGCTGGCGCCCTACACCCGGCAGACGGTGGATGCCGTTGCGCAGGCGCTGGGGCAGGGTGTCGACCTGATGGTGCTGA CCGACAGCGCACTGTCGCCGATTGCCCGCTCAGCAGCCCATACCTTGCTGTTCCGTGCCGACAGCCCTTCGTATTTCCAG TCCATGGTCGGTGCGCTGGCGCTGGCCGAAGCACTGGCCGCCGCCGTGGCGGTGCGCGGCGGCCGCAAGGTGCTGGCGCG CCTGCAGTCCCGGCAAAACCGGCTGGACAACGAGGGCGCCTACTGGGACAAGCTGGCCGACAAGCCGGTGCCCGTCCATC CATTGAGTTTCCCGGCGAGGAAATGA
Upstream 100 bases:
>100_bases GTCCATTCTTCGCCGCCCGGTGGCAGCGACCTCAGGCAATTGCTGATCTGGTGTTGAAACATTTGTGCTGTATATTATGA GAAATTGATTCAAATGTTTC
Downstream 100 bases:
>100_bases GTTTTATGGCCACAGTTCCTACCCATGTATTTCACCGGAACTTGCAGAACACGCCACCGGTGGCGGTCAGCGGGCAGGGT GTTTACCTGACCGATGCACA
Product: RpiR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; SIS Domain Protein; SIS Domain-Containing Protein; Sugar Isomerase; Transcriptional Regulator Protein; Transcription Regulator Protein; RpiR-Family Transcriptional Regulator; SIS Family Regulator; Transcriptional Regulator RpiR Family Protein; Transcriptional Regulator Rpir Family; GlvR Family Transcriptional Regulator; Conserved Hypothethical Protein; RpiR Family Regulatory; Transcriptional Regulator Of Myo-Inositol Catabolism Operon; RpiR Family Transcription Regulator Protein; Bifunctional Protein Glk; Sugar Isomerase Family Protein; Transcriptional Regulator IolR; Helix-Turn-Helix Domain RpiR Family
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTASSLFAKVPLDGLSPELLRAARWIEAHPREVALHSMRECARRAGLAPATLTRLSQALGFNGFDAIKNLCQESFAAQAG YAGRAEVLQASARHSKDWLAVLNETQHANTASIGGLNQRGQLEAAADAMLKARRIYFLGLRASHGLALHLHYTYGLLASN GVLVQGLGGTLSDQIGEMGRGDLLVAMSLAPYTRQTVDAVAQALGQGVDLMVLTDSALSPIARSAAHTLLFRADSPSYFQ SMVGALALAEALAAAVAVRGGRKVLARLQSRQNRLDNEGAYWDKLADKPVPVHPLSFPARK
Sequences:
>Translated_301_residues MTASSLFAKVPLDGLSPELLRAARWIEAHPREVALHSMRECARRAGLAPATLTRLSQALGFNGFDAIKNLCQESFAAQAG YAGRAEVLQASARHSKDWLAVLNETQHANTASIGGLNQRGQLEAAADAMLKARRIYFLGLRASHGLALHLHYTYGLLASN GVLVQGLGGTLSDQIGEMGRGDLLVAMSLAPYTRQTVDAVAQALGQGVDLMVLTDSALSPIARSAAHTLLFRADSPSYFQ SMVGALALAEALAAAVAVRGGRKVLARLQSRQNRLDNEGAYWDKLADKPVPVHPLSFPARK >Mature_300_residues TASSLFAKVPLDGLSPELLRAARWIEAHPREVALHSMRECARRAGLAPATLTRLSQALGFNGFDAIKNLCQESFAAQAGY AGRAEVLQASARHSKDWLAVLNETQHANTASIGGLNQRGQLEAAADAMLKARRIYFLGLRASHGLALHLHYTYGLLASNG VLVQGLGGTLSDQIGEMGRGDLLVAMSLAPYTRQTVDAVAQALGQGVDLMVLTDSALSPIARSAAHTLLFRADSPSYFQS MVGALALAEALAAAVAVRGGRKVLARLQSRQNRLDNEGAYWDKLADKPVPVHPLSFPARK
Specific function: Unknown
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32099; Mature: 31968
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASSLFAKVPLDGLSPELLRAARWIEAHPREVALHSMRECARRAGLAPATLTRLSQALG CCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC FNGFDAIKNLCQESFAAQAGYAGRAEVLQASARHSKDWLAVLNETQHANTASIGGLNQRG CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCC QLEAAADAMLKARRIYFLGLRASHGLALHLHYTYGLLASNGVLVQGLGGTLSDQIGEMGR CHHHHHHHHHHHHHHEEEEEECCCCEEEEEEEHHHHHHCCCEEEEECCCHHHHHHHCCCC GDLLVAMSLAPYTRQTVDAVAQALGQGVDLMVLTDSALSPIARSAAHTLLFRADSPSYFQ CCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHEEEECCCCHHHH SMVGALALAEALAAAVAVRGGRKVLARLQSRQNRLDNEGAYWDKLADKPVPVHPLSFPAR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCC K C >Mature Secondary Structure TASSLFAKVPLDGLSPELLRAARWIEAHPREVALHSMRECARRAGLAPATLTRLSQALG CCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC FNGFDAIKNLCQESFAAQAGYAGRAEVLQASARHSKDWLAVLNETQHANTASIGGLNQRG CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCC QLEAAADAMLKARRIYFLGLRASHGLALHLHYTYGLLASNGVLVQGLGGTLSDQIGEMGR CHHHHHHHHHHHHHHEEEEEECCCCEEEEEEEHHHHHHCCCEEEEECCCHHHHHHHCCCC GDLLVAMSLAPYTRQTVDAVAQALGQGVDLMVLTDSALSPIARSAAHTLLFRADSPSYFQ CCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHEEEECCCCHHHH SMVGALALAEALAAAVAVRGGRKVLARLQSRQNRLDNEGAYWDKLADKPVPVHPLSFPAR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA