| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787867
Identifier: 91787867
GI number: 91787867
Start: 2057705
End: 2058247
Strand: Reverse
Name: 91787867
Synonym: Bpro_1991
Alternate gene names: NA
Gene position: 2058247-2057705 (Counterclockwise)
Preceding gene: 91787868
Following gene: 91787857
Centisome position: 39.58
GC content: 64.83
Gene sequence:
>543_bases ATGCCTGCTGCTTCCCTTCTCAACAAGGCCTCCAGCGATGCCGCCCTGGAGCTCGCTGTCAAACGCAGCCGCCAGTTGCT GAACCGGCGTGCCATGGTTGCCGCGGTTGCCAGCGCAGTGCCCGTTCCCGGCCTCGACTGGGCCGTCGATGCGGCCCTGC TGTCACGGCTGATCCCGGAGATCAACGCGGAGTTTGCCCTGACACCTGCACAACTGGATCAACTCAATCCCAGCAAGCGG GAGCAAGTCCAGAAGGCAGTTGCCATGGTGGGTTCGGTGCTGATCGGAAAATTCATCAGCCGCGATCTGGTGATCAAGGC GGCGAGCAGCGTGGGTGTCAGGCTGACGAGTAAACAGGTCGCGAAGTTCGTGCCCCTGGCGGGTCAGGCCATCTCAGCCG CGATAGGCTATGCAGCCATCCGCTATTTTGGCGAGGAGCACATCCGCGACTGCGTGCGGGTGGCCCAGACCGCCGGGCTG TTGCCGCCACCGCCCCCATCCACCGCTGCGCGCACCCGCCGGCAGCGGGTTCACGCGTCGTAA
Upstream 100 bases:
>100_bases GAACGCTGGCTGGAACTGACCGAGCAGATCGAGACTGCCACGGTGTAAAGTGGTCGCTCCGGCACCCATCGACTTTTCAC CTGTTTGAAAGGGTCCTGAA
Downstream 100 bases:
>100_bases CGCCGGATCACCCGGCAGCAGCCCGAGGCCGTGCGCATGGCTGACAGATGCGGGATAACGCCATGCCAGGAAGCATCTTC CGTTGAGATACCGCCAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MPAASLLNKASSDAALELAVKRSRQLLNRRAMVAAVASAVPVPGLDWAVDAALLSRLIPEINAEFALTPAQLDQLNPSKR EQVQKAVAMVGSVLIGKFISRDLVIKAASSVGVRLTSKQVAKFVPLAGQAISAAIGYAAIRYFGEEHIRDCVRVAQTAGL LPPPPPSTAARTRRQRVHAS
Sequences:
>Translated_180_residues MPAASLLNKASSDAALELAVKRSRQLLNRRAMVAAVASAVPVPGLDWAVDAALLSRLIPEINAEFALTPAQLDQLNPSKR EQVQKAVAMVGSVLIGKFISRDLVIKAASSVGVRLTSKQVAKFVPLAGQAISAAIGYAAIRYFGEEHIRDCVRVAQTAGL LPPPPPSTAARTRRQRVHAS >Mature_179_residues PAASLLNKASSDAALELAVKRSRQLLNRRAMVAAVASAVPVPGLDWAVDAALLSRLIPEINAEFALTPAQLDQLNPSKRE QVQKAVAMVGSVLIGKFISRDLVIKAASSVGVRLTSKQVAKFVPLAGQAISAAIGYAAIRYFGEEHIRDCVRVAQTAGLL PPPPPSTAARTRRQRVHAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19065; Mature: 18934
Theoretical pI: Translated: 11.33; Mature: 11.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAASLLNKASSDAALELAVKRSRQLLNRRAMVAAVASAVPVPGLDWAVDAALLSRLIPE CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH INAEFALTPAQLDQLNPSKREQVQKAVAMVGSVLIGKFISRDLVIKAASSVGVRLTSKQV HCCCEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHH AKFVPLAGQAISAAIGYAAIRYFGEEHIRDCVRVAQTAGLLPPPPPSTAARTRRQRVHAS HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure PAASLLNKASSDAALELAVKRSRQLLNRRAMVAAVASAVPVPGLDWAVDAALLSRLIPE CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH INAEFALTPAQLDQLNPSKREQVQKAVAMVGSVLIGKFISRDLVIKAASSVGVRLTSKQV HCCCEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHH AKFVPLAGQAISAAIGYAAIRYFGEEHIRDCVRVAQTAGLLPPPPPSTAARTRRQRVHAS HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA