Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yheS [H]

Identifier: 91787868

GI number: 91787868

Start: 2058300

End: 2060336

Strand: Reverse

Name: yheS [H]

Synonym: Bpro_1992

Alternate gene names: 91787868

Gene position: 2060336-2058300 (Counterclockwise)

Preceding gene: 91787869

Following gene: 91787867

Centisome position: 39.62

GC content: 62.2

Gene sequence:

>2037_bases
ATGATTACCCTTAAAAACGTGGTGCTGCGTCGCGGCGCCAAAGTTATCCTCGACAGCGCCTCTGTCAGTCTCAACCCCGG
CGAAAAAATCGGCCTGGTGGGCCGCAATGGCGCGGGAAAGTCCTCGCTGTTTGCGATGCTCAACGGCACGCTGCATGAAG
ACGGCGGTGAATACACCATCCCGGCACAGTGGCGCATGTCCCAGGTCGCGCAGGACATGCCTGAGACAGAGCAAAGCGCC
ACCAGCTACGTGGTTGAAGGTGACGTGGTCCTGCTGGCTGCGCAGGCTGAAGTGGAGGCCTCCGAGGCCAGCGGCGACGG
CGACCGCATGGCCCACGCTTATATGGAGCTCTACGACGCGGGCGCGCACGACGCCCAGGCACGCGCGCAGGCCCTGATTT
TGGGCCTGGGCTTCAAGGTCAGCGAGCTCGACAACCCCGTCAACAGCTTCTCGGGCGGCTGGCGCATGCGCCTGCAGCTG
GCGCGCGCCCTGATGTGCCCGTCAGACCTGCTGCTGCTGGACGAACCGACAAACCACCTGGACCTGGACGCGCTGGTCTG
GCTGGAGGCCTGGCTCAAGCGCTACCAGGGCACCATGCTGGTCATCAGCCATGACCGGGAGTTTCTGGATGCGGTAACCG
ATGTCACGGTGCACATTGAAAACGCCAAACTCACACGCTACGGCGGCAACTACAGCAAGTTTGAAGACCTGCGTTCGGAA
CAGATGGCCTTGCAGCAGACCGCTTTTGCCAAGCAGCAGGACAAGATCGCCCACCTGCAGAAATTCATTGCGCGCTTCAA
GGCCAAGGCCAGCAAGGCCAAGCAGGCGCAAAGCCGGGTCAAGGCACTGGACCGCATGGAGAAAATCGCGCCGCTGCTGG
CTGAAGCCGACTTCACCTTCGAGTTCAAGGAGCCGGCCAACCTGCCTAACCCCATGCTGTCCATGCAGAACGTCTACTTC
GGCTATCCGCCGCCAGCAGATGCACCGGAGGGCACTCCGCCTACCGTCATCGTGCAAAACGTCAGCAAATCGGTGCTGGC
CGGCCAGCGCATCGGCATTCTGGGCGCCAACGGCCAGGGCAAATCGACCGTGGTCAAAACCATCGCACGCGCGCTGGCAC
CTATTCAAGGAGAGATGACCGAAGGCAAGGGCCTGAACATCGGCTACTTTGCCCAGCAGGAACTGGACGTGCTGCGCCCG
GCCGACAACCCGCTGGAGCACATGATCCGCCTGGTCAAAGAGGTGACTGCCGCCGGCAAGATCAGCGGCCAGGCCACGCG
CGAGCAGGACCTGCGCAGCTTTCTGGGCAACTTCAACTTTGGCGGCGACATGGTCAAGCAGGCCGTGGGCAGCATGAGCG
GCGGCGAAAAAGCCCGCCTGGTGCTGTGCATGATCGTCTGGCAGCGCCCCAACCTGTTGCTGCTCGATGAACCGACCAAC
CACCTGGACCTGGCCACGCGCGAAGCGCTGTCGATGGCGCTCAACGAGTTTGAAGGCACTGTGATGCTGGTCAGCCACGA
CCGTGCGCTGCTGCGAGCCGTGTGCGACGAGTTCTGGATGGTCTCGCGCGGCGGCGTGGCCCCGTTTGACGGCGACCTCG
ACGACTACCAGCGCTACCTGCTCGATGAAGCCAAGCGACAGCGCGAAGAGGCTAAAAAGTCGACCAGCAGTGCGGCTGCA
CCGGCGACTGCCACCAGCACCAGCGCTACCAAACCCATAGCTGGGAACGTAAATTCAACCGGAGCCAAAGCCGGTTCCGA
TGCCAAAAAGTCATCCGGTAAAAAAGACGAAGCCCAGCGCCGCCAGCAGCAATCCGACGTCACCAAACCGCTGCGCAAGG
AACTGGACAAGATAGACAGCCGGCTGCAGTCCCTGAACACCGAGCGCGACAGCCTGCAAACCGCCCTGACCACCATCACC
GCACCGGCAGAAATCGCCCAGGCCGGCAAGCGACTCAAGGCCATTGACAGTGAAATAGGCACGCTGGAAGAACGCTGGCT
GGAACTGACCGAGCAGATCGAGACTGCCACGGTGTAA

Upstream 100 bases:

>100_bases
CTGAAGCGCTGGCCCGGAATTTGCGCCTGGATCGATGGGTGTGCAGCGTGCCGCCCGAATAATTTTTCTGATCCTGTTGG
ATCTAGAGTCAGTGGTTTAA

Downstream 100 bases:

>100_bases
AGTGGTCGCTCCGGCACCCATCGACTTTTCACCTGTTTGAAAGGGTCCTGAAATGCCTGCTGCTTCCCTTCTCAACAAGG
CCTCCAGCGATGCCGCCCTG

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 678; Mature: 678

Protein sequence:

>678_residues
MITLKNVVLRRGAKVILDSASVSLNPGEKIGLVGRNGAGKSSLFAMLNGTLHEDGGEYTIPAQWRMSQVAQDMPETEQSA
TSYVVEGDVVLLAAQAEVEASEASGDGDRMAHAYMELYDAGAHDAQARAQALILGLGFKVSELDNPVNSFSGGWRMRLQL
ARALMCPSDLLLLDEPTNHLDLDALVWLEAWLKRYQGTMLVISHDREFLDAVTDVTVHIENAKLTRYGGNYSKFEDLRSE
QMALQQTAFAKQQDKIAHLQKFIARFKAKASKAKQAQSRVKALDRMEKIAPLLAEADFTFEFKEPANLPNPMLSMQNVYF
GYPPPADAPEGTPPTVIVQNVSKSVLAGQRIGILGANGQGKSTVVKTIARALAPIQGEMTEGKGLNIGYFAQQELDVLRP
ADNPLEHMIRLVKEVTAAGKISGQATREQDLRSFLGNFNFGGDMVKQAVGSMSGGEKARLVLCMIVWQRPNLLLLDEPTN
HLDLATREALSMALNEFEGTVMLVSHDRALLRAVCDEFWMVSRGGVAPFDGDLDDYQRYLLDEAKRQREEAKKSTSSAAA
PATATSTSATKPIAGNVNSTGAKAGSDAKKSSGKKDEAQRRQQQSDVTKPLRKELDKIDSRLQSLNTERDSLQTALTTIT
APAEIAQAGKRLKAIDSEIGTLEERWLELTEQIETATV

Sequences:

>Translated_678_residues
MITLKNVVLRRGAKVILDSASVSLNPGEKIGLVGRNGAGKSSLFAMLNGTLHEDGGEYTIPAQWRMSQVAQDMPETEQSA
TSYVVEGDVVLLAAQAEVEASEASGDGDRMAHAYMELYDAGAHDAQARAQALILGLGFKVSELDNPVNSFSGGWRMRLQL
ARALMCPSDLLLLDEPTNHLDLDALVWLEAWLKRYQGTMLVISHDREFLDAVTDVTVHIENAKLTRYGGNYSKFEDLRSE
QMALQQTAFAKQQDKIAHLQKFIARFKAKASKAKQAQSRVKALDRMEKIAPLLAEADFTFEFKEPANLPNPMLSMQNVYF
GYPPPADAPEGTPPTVIVQNVSKSVLAGQRIGILGANGQGKSTVVKTIARALAPIQGEMTEGKGLNIGYFAQQELDVLRP
ADNPLEHMIRLVKEVTAAGKISGQATREQDLRSFLGNFNFGGDMVKQAVGSMSGGEKARLVLCMIVWQRPNLLLLDEPTN
HLDLATREALSMALNEFEGTVMLVSHDRALLRAVCDEFWMVSRGGVAPFDGDLDDYQRYLLDEAKRQREEAKKSTSSAAA
PATATSTSATKPIAGNVNSTGAKAGSDAKKSSGKKDEAQRRQQQSDVTKPLRKELDKIDSRLQSLNTERDSLQTALTTIT
APAEIAQAGKRLKAIDSEIGTLEERWLELTEQIETATV
>Mature_678_residues
MITLKNVVLRRGAKVILDSASVSLNPGEKIGLVGRNGAGKSSLFAMLNGTLHEDGGEYTIPAQWRMSQVAQDMPETEQSA
TSYVVEGDVVLLAAQAEVEASEASGDGDRMAHAYMELYDAGAHDAQARAQALILGLGFKVSELDNPVNSFSGGWRMRLQL
ARALMCPSDLLLLDEPTNHLDLDALVWLEAWLKRYQGTMLVISHDREFLDAVTDVTVHIENAKLTRYGGNYSKFEDLRSE
QMALQQTAFAKQQDKIAHLQKFIARFKAKASKAKQAQSRVKALDRMEKIAPLLAEADFTFEFKEPANLPNPMLSMQNVYF
GYPPPADAPEGTPPTVIVQNVSKSVLAGQRIGILGANGQGKSTVVKTIARALAPIQGEMTEGKGLNIGYFAQQELDVLRP
ADNPLEHMIRLVKEVTAAGKISGQATREQDLRSFLGNFNFGGDMVKQAVGSMSGGEKARLVLCMIVWQRPNLLLLDEPTN
HLDLATREALSMALNEFEGTVMLVSHDRALLRAVCDEFWMVSRGGVAPFDGDLDDYQRYLLDEAKRQREEAKKSTSSAAA
PATATSTSATKPIAGNVNSTGAKAGSDAKKSSGKKDEAQRRQQQSDVTKPLRKELDKIDSRLQSLNTERDSLQTALTTIT
APAEIAQAGKRLKAIDSEIGTLEERWLELTEQIETATV

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=555, Percent_Identity=36.036036036036, Blast_Score=343, Evalue=2e-94,
Organism=Homo sapiens, GI10947137, Length=580, Percent_Identity=32.9310344827586, Blast_Score=320, Evalue=4e-87,
Organism=Homo sapiens, GI27881506, Length=548, Percent_Identity=33.7591240875912, Blast_Score=318, Evalue=9e-87,
Organism=Homo sapiens, GI69354671, Length=558, Percent_Identity=33.1541218637993, Blast_Score=258, Evalue=1e-68,
Organism=Homo sapiens, GI10947135, Length=557, Percent_Identity=33.0341113105925, Blast_Score=258, Evalue=1e-68,
Organism=Escherichia coli, GI1789751, Length=679, Percent_Identity=43.4462444771723, Blast_Score=579, Evalue=1e-166,
Organism=Escherichia coli, GI1787041, Length=551, Percent_Identity=31.7604355716878, Blast_Score=281, Evalue=8e-77,
Organism=Escherichia coli, GI1787182, Length=670, Percent_Identity=27.6119402985075, Blast_Score=211, Evalue=2e-55,
Organism=Escherichia coli, GI2367384, Length=541, Percent_Identity=29.3900184842884, Blast_Score=208, Evalue=8e-55,
Organism=Escherichia coli, GI1788165, Length=191, Percent_Identity=29.3193717277487, Blast_Score=73, Evalue=7e-14,
Organism=Escherichia coli, GI1786345, Length=219, Percent_Identity=30.5936073059361, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87081782, Length=232, Percent_Identity=27.5862068965517, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1786398, Length=211, Percent_Identity=26.5402843601896, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI48994997, Length=239, Percent_Identity=27.1966527196653, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1788506, Length=228, Percent_Identity=23.2456140350877, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI145693107, Length=579, Percent_Identity=21.0708117443869, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI87081709, Length=209, Percent_Identity=23.9234449760766, Blast_Score=62, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17553372, Length=549, Percent_Identity=36.6120218579235, Blast_Score=340, Evalue=2e-93,
Organism=Caenorhabditis elegans, GI17555318, Length=553, Percent_Identity=34.3580470162749, Blast_Score=306, Evalue=3e-83,
Organism=Caenorhabditis elegans, GI17559834, Length=569, Percent_Identity=32.5131810193322, Blast_Score=298, Evalue=6e-81,
Organism=Caenorhabditis elegans, GI25146777, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193211017, Length=262, Percent_Identity=28.2442748091603, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=262, Percent_Identity=28.2442748091603, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=262, Percent_Identity=28.2442748091603, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17541710, Length=217, Percent_Identity=27.1889400921659, Blast_Score=67, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI115533592, Length=212, Percent_Identity=25.9433962264151, Blast_Score=66, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=242, Percent_Identity=28.099173553719, Blast_Score=66, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=558, Percent_Identity=32.9749103942652, Blast_Score=314, Evalue=3e-86,
Organism=Saccharomyces cerevisiae, GI6320874, Length=545, Percent_Identity=33.394495412844, Blast_Score=297, Evalue=3e-81,
Organism=Saccharomyces cerevisiae, GI6325030, Length=389, Percent_Identity=29.5629820051414, Blast_Score=143, Evalue=7e-35,
Organism=Saccharomyces cerevisiae, GI6324314, Length=394, Percent_Identity=28.4263959390863, Blast_Score=141, Evalue=4e-34,
Organism=Saccharomyces cerevisiae, GI6323278, Length=394, Percent_Identity=28.4263959390863, Blast_Score=139, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24666836, Length=552, Percent_Identity=37.6811594202899, Blast_Score=367, Evalue=1e-101,
Organism=Drosophila melanogaster, GI24642252, Length=549, Percent_Identity=34.4262295081967, Blast_Score=321, Evalue=1e-87,
Organism=Drosophila melanogaster, GI18859989, Length=549, Percent_Identity=34.4262295081967, Blast_Score=321, Evalue=1e-87,
Organism=Drosophila melanogaster, GI24641342, Length=558, Percent_Identity=31.7204301075269, Blast_Score=287, Evalue=1e-77,
Organism=Drosophila melanogaster, GI116007184, Length=196, Percent_Identity=27.0408163265306, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI221500365, Length=196, Percent_Identity=27.0408163265306, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 74030; Mature: 74030

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLKNVVLRRGAKVILDSASVSLNPGEKIGLVGRNGAGKSSLFAMLNGTLHEDGGEYTI
CCCHHHHHHHCCCEEEEECCCEECCCCCEEEEEECCCCCHHHHHHHHCCCEECCCCCEEC
PAQWRMSQVAQDMPETEQSATSYVVEGDVVLLAAQAEVEASEASGDGDRMAHAYMELYDA
CHHHHHHHHHHCCCCHHHHHCCEEEECCEEEEEECCCCCHHCCCCCHHHHHHHHHHHHHC
GAHDAQARAQALILGLGFKVSELDNPVNSFSGGWRMRLQLARALMCPSDLLLLDEPTNHL
CCCHHHHHHHHHHHCCCCCHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC
DLDALVWLEAWLKRYQGTMLVISHDREFLDAVTDVTVHIENAKLTRYGGNYSKFEDLRSE
CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCEEEEEECCEEEECCCCHHHHHHHHHH
QMALQQTAFAKQQDKIAHLQKFIARFKAKASKAKQAQSRVKALDRMEKIAPLLAEADFTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
EFKEPANLPNPMLSMQNVYFGYPPPADAPEGTPPTVIVQNVSKSVLAGQRIGILGANGQG
EECCCCCCCCHHHHHCCCEECCCCCCCCCCCCCCEEEEHHHHHHHHCCCCEEEEECCCCC
KSTVVKTIARALAPIQGEMTEGKGLNIGYFAQQELDVLRPADNPLEHMIRLVKEVTAAGK
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
ISGQATREQDLRSFLGNFNFGGDMVKQAVGSMSGGEKARLVLCMIVWQRPNLLLLDEPTN
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHEEEEEEEECCCCEEEEECCCC
HLDLATREALSMALNEFEGTVMLVSHDRALLRAVCDEFWMVSRGGVAPFDGDLDDYQRYL
CHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
LDEAKRQREEAKKSTSSAAAPATATSTSATKPIAGNVNSTGAKAGSDAKKSSGKKDEAQR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHH
RQQQSDVTKPLRKELDKIDSRLQSLNTERDSLQTALTTITAPAEIAQAGKRLKAIDSEIG
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
TLEERWLELTEQIETATV
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MITLKNVVLRRGAKVILDSASVSLNPGEKIGLVGRNGAGKSSLFAMLNGTLHEDGGEYTI
CCCHHHHHHHCCCEEEEECCCEECCCCCEEEEEECCCCCHHHHHHHHCCCEECCCCCEEC
PAQWRMSQVAQDMPETEQSATSYVVEGDVVLLAAQAEVEASEASGDGDRMAHAYMELYDA
CHHHHHHHHHHCCCCHHHHHCCEEEECCEEEEEECCCCCHHCCCCCHHHHHHHHHHHHHC
GAHDAQARAQALILGLGFKVSELDNPVNSFSGGWRMRLQLARALMCPSDLLLLDEPTNHL
CCCHHHHHHHHHHHCCCCCHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC
DLDALVWLEAWLKRYQGTMLVISHDREFLDAVTDVTVHIENAKLTRYGGNYSKFEDLRSE
CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCEEEEEECCEEEECCCCHHHHHHHHHH
QMALQQTAFAKQQDKIAHLQKFIARFKAKASKAKQAQSRVKALDRMEKIAPLLAEADFTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
EFKEPANLPNPMLSMQNVYFGYPPPADAPEGTPPTVIVQNVSKSVLAGQRIGILGANGQG
EECCCCCCCCHHHHHCCCEECCCCCCCCCCCCCCEEEEHHHHHHHHCCCCEEEEECCCCC
KSTVVKTIARALAPIQGEMTEGKGLNIGYFAQQELDVLRPADNPLEHMIRLVKEVTAAGK
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
ISGQATREQDLRSFLGNFNFGGDMVKQAVGSMSGGEKARLVLCMIVWQRPNLLLLDEPTN
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHEEEEEEEECCCCEEEEECCCC
HLDLATREALSMALNEFEGTVMLVSHDRALLRAVCDEFWMVSRGGVAPFDGDLDDYQRYL
CHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
LDEAKRQREEAKKSTSSAAAPATATSTSATKPIAGNVNSTGAKAGSDAKKSSGKKDEAQR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHH
RQQQSDVTKPLRKELDKIDSRLQSLNTERDSLQTALTTITAPAEIAQAGKRLKAIDSEIG
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
TLEERWLELTEQIETATV
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]