Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787857

Identifier: 91787857

GI number: 91787857

Start: 2048860

End: 2049975

Strand: Reverse

Name: 91787857

Synonym: Bpro_1981

Alternate gene names: NA

Gene position: 2049975-2048860 (Counterclockwise)

Preceding gene: 91787867

Following gene: 91787856

Centisome position: 39.42

GC content: 50.99

Gene sequence:

>1116_bases
ATGCTGCAAATGATTCCCAAGTGGCGCGCCTTTATCGACCATTGGCTGCAAAAGCAGGCTCAAGTATGCGTAACACAGCC
GCTCAGCAAAACTGTCAGTGCTAACGACAAGGCCTACTTTGCACATATCGGAGTTCGTAAATTAGCATGGCGCCAGTTGC
GTCACGCGCTATATTTCAAGCTTTCTGGCCACGGAAAAAGATGTTTCCGCAAGATTCCAGCTCATTGGAAGCGTGGCTTG
TGGCTGTACAAAGGAATTCCGCAAATCGGTGATGCATTGATGGACCTTGCCCCGCGCAGCCTGCTGCGCGATCAGGGCTT
GTCTATTGACTTGTTGACTGATGAGCACATCGCTGCGACGTTCGATGGCGACCCGTGGTTTGAAAATGTGCTCAGTTCGA
GTGAAGCAATCAATTCACAAAACTACGATTTCGTGATTGTCCCGAGCCACAAAAGGCGCTCTCTGCACCATAAGAGCGAT
GCTTTTAGCCCGAGTCCGTGGATCTCAGTACATGGGTTTTACACCGGGCCCGAATTCCATCGAGGTGAGTTTGCAACTCA
ACGATTGCTTGATGCTTTGGGTGTAGCACTACCCGCCGATGTGTTTTCTCAACATAGTCGGCAAAAGCTCAAACCACTGG
GGACGCCGGAAAAGCGGACCAGTTCAGTGCTCAAGATTGCATTTGCGGTGGGCGGTGTAGATCCGCTTAGAAGCTATACG
CACTGGGATACGCTGGCGCATCATCTCAGCAAGCTTATTGATCTGGAGATCACACTCGTTGGATCTGAAAATGGCCTTGG
ATTCGCGAAAGCGTTTGAAGAGAGCTGGCGTGGTCTTGTGAACAACGCTGTCAATCAAACCAGCCTGGCTCAATGTCGGC
AGTTGATCAATGAACAAGATGTGTTGGTTGCTTGCGATGGCGGTTTGATGCATCTGGGAGTTACCACCCACGTCAAACTT
ATTTCTCTGTTTACCTCCGCTGTCGATCCGCAGTGGCGTCTGCCCCGCGATAGACTATCGAGCGCACTGCAAGCCCCAAC
GAACAGCGTAAATTCAATTGCCCCATCAGATATTGCACACCAGGTGATCGAAGCCATGCGCTTTTTAGACCGGTGA

Upstream 100 bases:

>100_bases
TGGGGGGGGCTTGGCCGACAGCCCTTACAGAGCGGCCAAACTGGATGGCATCGATCCTACGAGCTCAGGCACGTGAACCA
GGGCAAGCAGATGAGCGACA

Downstream 100 bases:

>100_bases
GGCCTCTCATCCGTAGATCTACCAGATCTACCAGATCTAGAACGTCAATTGAAATTTTGTGACACTCCTCCAATCAAATC
TTGAAATATCCCGTACTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MLQMIPKWRAFIDHWLQKQAQVCVTQPLSKTVSANDKAYFAHIGVRKLAWRQLRHALYFKLSGHGKRCFRKIPAHWKRGL
WLYKGIPQIGDALMDLAPRSLLRDQGLSIDLLTDEHIAATFDGDPWFENVLSSSEAINSQNYDFVIVPSHKRRSLHHKSD
AFSPSPWISVHGFYTGPEFHRGEFATQRLLDALGVALPADVFSQHSRQKLKPLGTPEKRTSSVLKIAFAVGGVDPLRSYT
HWDTLAHHLSKLIDLEITLVGSENGLGFAKAFEESWRGLVNNAVNQTSLAQCRQLINEQDVLVACDGGLMHLGVTTHVKL
ISLFTSAVDPQWRLPRDRLSSALQAPTNSVNSIAPSDIAHQVIEAMRFLDR

Sequences:

>Translated_371_residues
MLQMIPKWRAFIDHWLQKQAQVCVTQPLSKTVSANDKAYFAHIGVRKLAWRQLRHALYFKLSGHGKRCFRKIPAHWKRGL
WLYKGIPQIGDALMDLAPRSLLRDQGLSIDLLTDEHIAATFDGDPWFENVLSSSEAINSQNYDFVIVPSHKRRSLHHKSD
AFSPSPWISVHGFYTGPEFHRGEFATQRLLDALGVALPADVFSQHSRQKLKPLGTPEKRTSSVLKIAFAVGGVDPLRSYT
HWDTLAHHLSKLIDLEITLVGSENGLGFAKAFEESWRGLVNNAVNQTSLAQCRQLINEQDVLVACDGGLMHLGVTTHVKL
ISLFTSAVDPQWRLPRDRLSSALQAPTNSVNSIAPSDIAHQVIEAMRFLDR
>Mature_371_residues
MLQMIPKWRAFIDHWLQKQAQVCVTQPLSKTVSANDKAYFAHIGVRKLAWRQLRHALYFKLSGHGKRCFRKIPAHWKRGL
WLYKGIPQIGDALMDLAPRSLLRDQGLSIDLLTDEHIAATFDGDPWFENVLSSSEAINSQNYDFVIVPSHKRRSLHHKSD
AFSPSPWISVHGFYTGPEFHRGEFATQRLLDALGVALPADVFSQHSRQKLKPLGTPEKRTSSVLKIAFAVGGVDPLRSYT
HWDTLAHHLSKLIDLEITLVGSENGLGFAKAFEESWRGLVNNAVNQTSLAQCRQLINEQDVLVACDGGLMHLGVTTHVKL
ISLFTSAVDPQWRLPRDRLSSALQAPTNSVNSIAPSDIAHQVIEAMRFLDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41701; Mature: 41701

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQMIPKWRAFIDHWLQKQAQVCVTQPLSKTVSANDKAYFAHIGVRKLAWRQLRHALYFK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHEEE
LSGHGKRCFRKIPAHWKRGLWLYKGIPQIGDALMDLAPRSLLRDQGLSIDLLTDEHIAAT
ECCCHHHHHHHHHHHHHCCEEHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEE
FDGDPWFENVLSSSEAINSQNYDFVIVPSHKRRSLHHKSDAFSPSPWISVHGFYTGPEFH
ECCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCC
RGEFATQRLLDALGVALPADVFSQHSRQKLKPLGTPEKRTSSVLKIAFAVGGVDPLRSYT
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
HWDTLAHHLSKLIDLEITLVGSENGLGFAKAFEESWRGLVNNAVNQTSLAQCRQLINEQD
HHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
VLVACDGGLMHLGVTTHVKLISLFTSAVDPQWRLPRDRLSSALQAPTNSVNSIAPSDIAH
EEEEECCCEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHH
QVIEAMRFLDR
HHHHHHHHHCC
>Mature Secondary Structure
MLQMIPKWRAFIDHWLQKQAQVCVTQPLSKTVSANDKAYFAHIGVRKLAWRQLRHALYFK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHEEE
LSGHGKRCFRKIPAHWKRGLWLYKGIPQIGDALMDLAPRSLLRDQGLSIDLLTDEHIAAT
ECCCHHHHHHHHHHHHHCCEEHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEE
FDGDPWFENVLSSSEAINSQNYDFVIVPSHKRRSLHHKSDAFSPSPWISVHGFYTGPEFH
ECCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCC
RGEFATQRLLDALGVALPADVFSQHSRQKLKPLGTPEKRTSSVLKIAFAVGGVDPLRSYT
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
HWDTLAHHLSKLIDLEITLVGSENGLGFAKAFEESWRGLVNNAVNQTSLAQCRQLINEQD
HHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
VLVACDGGLMHLGVTTHVKLISLFTSAVDPQWRLPRDRLSSALQAPTNSVNSIAPSDIAH
EEEEECCCEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHH
QVIEAMRFLDR
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA