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The map label for this gene is yadE [H]

Identifier: 91787852

GI number: 91787852

Start: 2042788

End: 2043561

Strand: Direct

Name: yadE [H]

Synonym: Bpro_1976

Alternate gene names: 91787852

Gene position: 2042788-2043561 (Clockwise)

Preceding gene: 91787851

Following gene: 91787853

Centisome position: 39.28

GC content: 61.11

Gene sequence:

>774_bases
ATGAGCGCAAGCTTTCCGGCCATCCTGGCAACAGCTTGCACCGCCAACCGCAGGCCCATTCCCATTCTGGTCTATCACCA
GATTGCCGAGGCGCCGCCCAAGGGTAGTCCTTTTCGCAGCCTCTATGTGTCTCCCCGGGCTTTCGCCCGGCAAATGGCCT
GGCTCAAGCTGCTGGGCTACACCGGTTTGTCCATGAGCGGCCTGCAGCCCTACCTCAGTGGCGAGCGCGACGGCCGGGTT
GTTGGCATCACCTTCGACGATGGCTACCAGAACAACCTCGTGCATGCCTTGCCGGCCTTGTTGAAGCAGGGCTTTTCGTC
GACCTGTTATGCGGTGAGCGGGCTGCTGGGCAAGACCAATGTGTGGGATGAGGGGCTGGGTATTGCGCAGACGCCGCTGA
TGAACGAAGCGGAAATACGCCAATGGGTGGCCGCCGGGCAGGAGATTGGCTCACACACACACCAGCACGTGAATTTGCTG
GCGATTGACGAGGCTGGGTGCCGCGTGGAGATGGCGCAGGGAAAAGCCGGGCTTGAATCGGTTATCGGGCAGCCCGTGCA
TCACTTTTGTTATCCGTATGGCAACTATGAGCCCAAGCACGTGGCCATGGCGCGTGAACAGGGCTTTGTGACGGCCACGA
CCACCGGGCGGAGCCGTTGCCATGCACAGATGGATTTGCTGCAACTGCCGCGGGTGCCGGTGCTTCGCTCGACCAGCCTG
CCGGTTTTCTGGCTCAAGATCGCCACCGGCTACGAAGACCGCCGAAACAAATGA

Upstream 100 bases:

>100_bases
AAAGCCAGCACCTGGCCGGCCTGAGCGACTTCATCGGCAAGCCCATTTCGCTGCAGGCGGAAGCGGCCATGGCGCAGGAA
CAGTACGACATCGTTCTGCT

Downstream 100 bases:

>100_bases
GCCTGCCTTCCTTGAGCCCGGTGGAGCATTCAGGCCTCGCCCGGCAGAAACTGCGGATCGCGGTTCTCAACCGGACTTTC
TCATCTACCGGTGGTGGTGC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSASFPAILATACTANRRPIPILVYHQIAEAPPKGSPFRSLYVSPRAFARQMAWLKLLGYTGLSMSGLQPYLSGERDGRV
VGITFDDGYQNNLVHALPALLKQGFSSTCYAVSGLLGKTNVWDEGLGIAQTPLMNEAEIRQWVAAGQEIGSHTHQHVNLL
AIDEAGCRVEMAQGKAGLESVIGQPVHHFCYPYGNYEPKHVAMAREQGFVTATTTGRSRCHAQMDLLQLPRVPVLRSTSL
PVFWLKIATGYEDRRNK

Sequences:

>Translated_257_residues
MSASFPAILATACTANRRPIPILVYHQIAEAPPKGSPFRSLYVSPRAFARQMAWLKLLGYTGLSMSGLQPYLSGERDGRV
VGITFDDGYQNNLVHALPALLKQGFSSTCYAVSGLLGKTNVWDEGLGIAQTPLMNEAEIRQWVAAGQEIGSHTHQHVNLL
AIDEAGCRVEMAQGKAGLESVIGQPVHHFCYPYGNYEPKHVAMAREQGFVTATTTGRSRCHAQMDLLQLPRVPVLRSTSL
PVFWLKIATGYEDRRNK
>Mature_256_residues
SASFPAILATACTANRRPIPILVYHQIAEAPPKGSPFRSLYVSPRAFARQMAWLKLLGYTGLSMSGLQPYLSGERDGRVV
GITFDDGYQNNLVHALPALLKQGFSSTCYAVSGLLGKTNVWDEGLGIAQTPLMNEAEIRQWVAAGQEIGSHTHQHVNLLA
IDEAGCRVEMAQGKAGLESVIGQPVHHFCYPYGNYEPKHVAMAREQGFVTATTTGRSRCHAQMDLLQLPRVPVLRSTSLP
VFWLKIATGYEDRRNK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786322, Length=235, Percent_Identity=30.2127659574468, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 28222; Mature: 28091

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASFPAILATACTANRRPIPILVYHQIAEAPPKGSPFRSLYVSPRAFARQMAWLKLLGY
CCCCCHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHC
TGLSMSGLQPYLSGERDGRVVGITFDDGYQNNLVHALPALLKQGFSSTCYAVSGLLGKTN
CCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCC
VWDEGLGIAQTPLMNEAEIRQWVAAGQEIGSHTHQHVNLLAIDEAGCRVEMAQGKAGLES
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHEEEEEEEECCCCEEEECCCCCHHHH
VIGQPVHHFCYPYGNYEPKHVAMAREQGFVTATTTGRSRCHAQMDLLQLPRVPVLRSTSL
HHCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCEECCCC
PVFWLKIATGYEDRRNK
CEEEEEEECCCHHCCCC
>Mature Secondary Structure 
SASFPAILATACTANRRPIPILVYHQIAEAPPKGSPFRSLYVSPRAFARQMAWLKLLGY
CCCCHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHC
TGLSMSGLQPYLSGERDGRVVGITFDDGYQNNLVHALPALLKQGFSSTCYAVSGLLGKTN
CCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCC
VWDEGLGIAQTPLMNEAEIRQWVAAGQEIGSHTHQHVNLLAIDEAGCRVEMAQGKAGLES
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHEEEEEEEECCCCEEEECCCCCHHHH
VIGQPVHHFCYPYGNYEPKHVAMAREQGFVTATTTGRSRCHAQMDLLQLPRVPVLRSTSL
HHCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCEECCCC
PVFWLKIATGYEDRRNK
CEEEEEEECCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]