| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is rfaG [H]
Identifier: 91787853
GI number: 91787853
Start: 2043558
End: 2044772
Strand: Direct
Name: rfaG [H]
Synonym: Bpro_1977
Alternate gene names: 91787853
Gene position: 2043558-2044772 (Clockwise)
Preceding gene: 91787852
Following gene: 91787858
Centisome position: 39.3
GC content: 62.47
Gene sequence:
>1215_bases ATGAGCCTGCCTTCCTTGAGCCCGGTGGAGCATTCAGGCCTCGCCCGGCAGAAACTGCGGATCGCGGTTCTCAACCGGAC TTTCTCATCTACCGGTGGTGGTGCCGAGCGCTATTCCATCGCGCTGGTCGAGCAATTGTCTGCCGCGCATGAGGTGCATG TGTTTGCCCAGGAGATCGATCACCACTGGCCGGGCGTCAGTTACCACCGTATTTCTGCGCCTTTGCGCAAGCCCCGCTGG GTCAACCAGTTGTGGTTTGCCACGGCCACCTGGTGGGCCACGCGGCGCGGCTTTGATGTGGTGCATTCCCATGAAAACAC CTGGCATGGAAACGTCCAGACGGTTCACGTGTTGCCGGTCAAATACAACCTGCTCCATGGGATCAGCGGCTGGCGCCTGC TGCTGCGGTGGATCAAGGTCGTGACCAGCCCGCGTTTACTGACGTATCTAGGGCTGGAGCGCTTGCGGTATGTGGCCCGC CCCGGCCGTCAGGTAGTGGTGACCTCTGGCAGCCTGCAGGCCATCATGGCCGCCAGCTATCCGGCCTGCAAGGAAATGGT CTCTGTTGTCACGCCGGGCATCACGATGCCGGCGCAAGCTGTGACGCCCGCGCTAAAGCGGGAGGCGCGGGCGCTGCTGG GCTTGCCGGCGCAAGCGCGCTGCCTGCTGTTTGCAGGCAACGATTACCGCAAAAAAGGCTTGCAGGCCCTGCTGGAAGCG ATGGTGCACCTGCCTTCCGATGTGGTGCTGGCGGTGGTCGGCAACCCGGCGCATATTCCAGCGTTCAGGGTGCAGGCCGA GGCCTGCAAGCTGGGTGCGCGGGTCTTTTTCCTGGGCTCGCTGAAGGATGTTGGGCCTGCCTACACAGCCGTGGATGGCC TGGTGCATCCAACGCTGGAAGATACCTTTGCCATGGTGGTGTTGGAGGCCATGGCATATGGCCTGCCTGTGGTGGTCAGC GGCCCTCGCTATTGCGGTATTTCCGGGCTGCTGCAGGACGGCGTTAATGCCATGATTCTTGAGGATCCCCGGGATGCCAA CAAGTTGGCGCAGCTCATTCAGCAGGTGCTGGGCCAGCCAGCACTTCAAGGCCGGTTGATGCAGGGTGCCACCGAGTTCG CCAGGCATTACCAGTGGCGCGAGATCGCCTTACAGCAGGAAGCACTGTATTTTGCGGCGCTGGCCGCCTCGAAAGCGGCC GGCAGCGCGCAATAG
Upstream 100 bases:
>100_bases TGGATTTGCTGCAACTGCCGCGGGTGCCGGTGCTTCGCTCGACCAGCCTGCCGGTTTTCTGGCTCAAGATCGCCACCGGC TACGAAGACCGCCGAAACAA
Downstream 100 bases:
>100_bases CAGCGGGTCAACAACCGCTGCTGGCGTGAGTCAGGCCACCAGCTTGAAATGCTTGCGGCTGAAATCCAGCCCGGTCAGAG TTTCAAGCTGTCGCATGAAG
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glucosyltransferase I [H]
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MSLPSLSPVEHSGLARQKLRIAVLNRTFSSTGGGAERYSIALVEQLSAAHEVHVFAQEIDHHWPGVSYHRISAPLRKPRW VNQLWFATATWWATRRGFDVVHSHENTWHGNVQTVHVLPVKYNLLHGISGWRLLLRWIKVVTSPRLLTYLGLERLRYVAR PGRQVVVTSGSLQAIMAASYPACKEMVSVVTPGITMPAQAVTPALKREARALLGLPAQARCLLFAGNDYRKKGLQALLEA MVHLPSDVVLAVVGNPAHIPAFRVQAEACKLGARVFFLGSLKDVGPAYTAVDGLVHPTLEDTFAMVVLEAMAYGLPVVVS GPRYCGISGLLQDGVNAMILEDPRDANKLAQLIQQVLGQPALQGRLMQGATEFARHYQWREIALQQEALYFAALAASKAA GSAQ
Sequences:
>Translated_404_residues MSLPSLSPVEHSGLARQKLRIAVLNRTFSSTGGGAERYSIALVEQLSAAHEVHVFAQEIDHHWPGVSYHRISAPLRKPRW VNQLWFATATWWATRRGFDVVHSHENTWHGNVQTVHVLPVKYNLLHGISGWRLLLRWIKVVTSPRLLTYLGLERLRYVAR PGRQVVVTSGSLQAIMAASYPACKEMVSVVTPGITMPAQAVTPALKREARALLGLPAQARCLLFAGNDYRKKGLQALLEA MVHLPSDVVLAVVGNPAHIPAFRVQAEACKLGARVFFLGSLKDVGPAYTAVDGLVHPTLEDTFAMVVLEAMAYGLPVVVS GPRYCGISGLLQDGVNAMILEDPRDANKLAQLIQQVLGQPALQGRLMQGATEFARHYQWREIALQQEALYFAALAASKAA GSAQ >Mature_403_residues SLPSLSPVEHSGLARQKLRIAVLNRTFSSTGGGAERYSIALVEQLSAAHEVHVFAQEIDHHWPGVSYHRISAPLRKPRWV NQLWFATATWWATRRGFDVVHSHENTWHGNVQTVHVLPVKYNLLHGISGWRLLLRWIKVVTSPRLLTYLGLERLRYVARP GRQVVVTSGSLQAIMAASYPACKEMVSVVTPGITMPAQAVTPALKREARALLGLPAQARCLLFAGNDYRKKGLQALLEAM VHLPSDVVLAVVGNPAHIPAFRVQAEACKLGARVFFLGSLKDVGPAYTAVDGLVHPTLEDTFAMVVLEAMAYGLPVVVSG PRYCGISGLLQDGVNAMILEDPRDANKLAQLIQQVLGQPALQGRLMQGATEFARHYQWREIALQQEALYFAALAASKAAG SAQ
Specific function: Involved in the addition of the first glucose residue to the lipopolysaccharide core [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790061, Length=244, Percent_Identity=26.6393442622951, Blast_Score=76, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: 2.4.1.-
Molecular weight: Translated: 44229; Mature: 44098
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPSLSPVEHSGLARQKLRIAVLNRTFSSTGGGAERYSIALVEQLSAAHEVHVFAQEID CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HHWPGVSYHRISAPLRKPRWVNQLWFATATWWATRRGFDVVHSHENTWHGNVQTVHVLPV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCEEEEEEEEE KYNLLHGISGWRLLLRWIKVVTSPRLLTYLGLERLRYVARPGRQVVVTSGSLQAIMAASY EEHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCC PACKEMVSVVTPGITMPAQAVTPALKREARALLGLPAQARCLLFAGNDYRKKGLQALLEA HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH MVHLPSDVVLAVVGNPAHIPAFRVQAEACKLGARVFFLGSLKDVGPAYTAVDGLVHPTLE HHHCCCCEEEEEECCCCCCCHHEEEHHHHHHCCEEEEEECCHHCCCHHHHHHHHHCCCHH DTFAMVVLEAMAYGLPVVVSGPRYCGISGLLQDGVNAMILEDPRDANKLAQLIQQVLGQP HHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCH ALQGRLMQGATEFARHYQWREIALQQEALYFAALAASKAAGSAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SLPSLSPVEHSGLARQKLRIAVLNRTFSSTGGGAERYSIALVEQLSAAHEVHVFAQEID CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HHWPGVSYHRISAPLRKPRWVNQLWFATATWWATRRGFDVVHSHENTWHGNVQTVHVLPV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCEEEEEEEEE KYNLLHGISGWRLLLRWIKVVTSPRLLTYLGLERLRYVARPGRQVVVTSGSLQAIMAASY EEHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCC PACKEMVSVVTPGITMPAQAVTPALKREARALLGLPAQARCLLFAGNDYRKKGLQALLEA HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH MVHLPSDVVLAVVGNPAHIPAFRVQAEACKLGARVFFLGSLKDVGPAYTAVDGLVHPTLE HHHCCCCEEEEEECCCCCCCHHEEEHHHHHHCCEEEEEECCHHCCCHHHHHHHHHCCCHH DTFAMVVLEAMAYGLPVVVSGPRYCGISGLLQDGVNAMILEDPRDANKLAQLIQQVLGQP HHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCH ALQGRLMQGATEFARHYQWREIALQQEALYFAALAASKAAGSAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1732225; 8041620; 9278503; 1447141; 7988890 [H]