| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91787837
Identifier: 91787837
GI number: 91787837
Start: 2027499
End: 2028647
Strand: Reverse
Name: 91787837
Synonym: Bpro_1961
Alternate gene names: NA
Gene position: 2028647-2027499 (Counterclockwise)
Preceding gene: 91787838
Following gene: 91787836
Centisome position: 39.01
GC content: 67.01
Gene sequence:
>1149_bases ATGAAGCGCGGCCTTGTGAAGCGCTTCCTTGTACTGCTGGCCGCCCTGCTCCTGCAAGTCTTGCAAGGCACGGCCTGGGC CCACAAGCCCAGCGACAGCTACCTGACCCTGCGCGCCGCCTCTGGCAGCAGCGATATTGCCGTGCGCTGGGACATCGCCC TGCGCGACCTCGACTACGTGCTGCAGCTCGACCGCGACGGCAATGGCGAACTGACCTGGGGCGAAGTCAGGCAGCGCAGC GACGAGATCACGCGGCTGGCCACCAGCCGGCTGGAGCTCACCGTGGCCGACAAGCCCTGCGCTTGGGTCACCAGCGGCCC GCTCGCGCTCGACAAACACAGCGACGGCACCTACGCCGTGCTCAGCCTCACCGCGCAGTGCGCCAGCCTCACCAGCGCCC TCAAGGCGCGCTATTCCCTGCTGTTCGATGTAGACCCTTCCCACCGCGGCCTGGTGCAATGGATAGCGCCCGGCGCCGAA AGCGCCCAGGCGCTGGTCTTCGGCACCGACTCGGCCGAGCAGGCACTGGCGCTGCAACCCGCCGGTGCCTGGCAGACCCT GCGCCAGTACCTGCTCGATGGTGTCTGGCATATCTGGATCGGCTATGACCATATCCTGTTCCTGCTGGCGCTGCTGCTAC CGTCCGTACTGATGCGGCGCCAGGGTCAATGGGAACCCGCCCCTCGGCTGAGCGGCGCTGTCAAAGAGGTGGTCAAGGTG GTCACGGCCTTCACGCTGGCCCATTCCATCACGCTGAGCCTGGCGGCGCTGCAGATCATCAGCCTGCCTACGCGGCTGGT GGAGTCGGCCATCGCCGCCTCGGTGGTCGTGGCGGCGCTGAACAATTTGCGCGGCACGATTGAGGGCCGGCGCTGGGTGA TGGCCTTCGTGTTTGGCCTGCTCCATGGCTTCGGTTTTGCCTCGGTGCTGGCCGACCTGGGCCTGCCGCAAAACGCCCTG GTGCTGGCGCTGGTCGGCTTCAATGCCGGCGTGGAAGTGGGCCAGCTGGCCATCGTCGCCGTGTTTTTGCCGCTGGCGTT CTGGCTGCGCGCCACCCGGTTCTACCGCGTGGGCGTGCTCAAGGTCGGCTCGCTGCTGGTGGCCTTGCTCGCGAGCTGGT GGCTGGTGCAAAGGCTGTTTGATCTGTAG
Upstream 100 bases:
>100_bases AGGCCGCGCAGCCCGCCCTCGACTGGTTGCGCACCAGCCGCTACGAAGATCCGGCATTTGACAAACTCGCCACGCAGCTG GCCGCCCAGGGAGCCACACG
Downstream 100 bases:
>100_bases TATTGTTTTTCGGCTATGCATTCTCTTTCTGCGACGATTGCCAAGGTCGATCACGGACCCGGCGATGGCGCAGACGCTGA GGAGACCCTGCCTCGAGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MKRGLVKRFLVLLAALLLQVLQGTAWAHKPSDSYLTLRAASGSSDIAVRWDIALRDLDYVLQLDRDGNGELTWGEVRQRS DEITRLATSRLELTVADKPCAWVTSGPLALDKHSDGTYAVLSLTAQCASLTSALKARYSLLFDVDPSHRGLVQWIAPGAE SAQALVFGTDSAEQALALQPAGAWQTLRQYLLDGVWHIWIGYDHILFLLALLLPSVLMRRQGQWEPAPRLSGAVKEVVKV VTAFTLAHSITLSLAALQIISLPTRLVESAIAASVVVAALNNLRGTIEGRRWVMAFVFGLLHGFGFASVLADLGLPQNAL VLALVGFNAGVEVGQLAIVAVFLPLAFWLRATRFYRVGVLKVGSLLVALLASWWLVQRLFDL
Sequences:
>Translated_382_residues MKRGLVKRFLVLLAALLLQVLQGTAWAHKPSDSYLTLRAASGSSDIAVRWDIALRDLDYVLQLDRDGNGELTWGEVRQRS DEITRLATSRLELTVADKPCAWVTSGPLALDKHSDGTYAVLSLTAQCASLTSALKARYSLLFDVDPSHRGLVQWIAPGAE SAQALVFGTDSAEQALALQPAGAWQTLRQYLLDGVWHIWIGYDHILFLLALLLPSVLMRRQGQWEPAPRLSGAVKEVVKV VTAFTLAHSITLSLAALQIISLPTRLVESAIAASVVVAALNNLRGTIEGRRWVMAFVFGLLHGFGFASVLADLGLPQNAL VLALVGFNAGVEVGQLAIVAVFLPLAFWLRATRFYRVGVLKVGSLLVALLASWWLVQRLFDL >Mature_382_residues MKRGLVKRFLVLLAALLLQVLQGTAWAHKPSDSYLTLRAASGSSDIAVRWDIALRDLDYVLQLDRDGNGELTWGEVRQRS DEITRLATSRLELTVADKPCAWVTSGPLALDKHSDGTYAVLSLTAQCASLTSALKARYSLLFDVDPSHRGLVQWIAPGAE SAQALVFGTDSAEQALALQPAGAWQTLRQYLLDGVWHIWIGYDHILFLLALLLPSVLMRRQGQWEPAPRLSGAVKEVVKV VTAFTLAHSITLSLAALQIISLPTRLVESAIAASVVVAALNNLRGTIEGRRWVMAFVFGLLHGFGFASVLADLGLPQNAL VLALVGFNAGVEVGQLAIVAVFLPLAFWLRATRFYRVGVLKVGSLLVALLASWWLVQRLFDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41635; Mature: 41635
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRGLVKRFLVLLAALLLQVLQGTAWAHKPSDSYLTLRAASGSSDIAVRWDIALRDLDYV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEEEEHHHHCCHHH LQLDRDGNGELTWGEVRQRSDEITRLATSRLELTVADKPCAWVTSGPLALDKHSDGTYAV EEECCCCCCCEEHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCEEEECCCCCCEEH LSLTAQCASLTSALKARYSLLFDVDPSHRGLVQWIAPGAESAQALVFGTDSAEQALALQP HHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHCCCCCCCCCEEEEECCCHHHHEEECC AGAWQTLRQYLLDGVWHIWIGYDHILFLLALLLPSVLMRRQGQWEPAPRLSGAVKEVVKV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH VTAFTLAHSITLSLAALQIISLPTRLVESAIAASVVVAALNNLRGTIEGRRWVMAFVFGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHH LHGFGFASVLADLGLPQNALVLALVGFNAGVEVGQLAIVAVFLPLAFWLRATRFYRVGVL HHHCCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVGSLLVALLASWWLVQRLFDL HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRGLVKRFLVLLAALLLQVLQGTAWAHKPSDSYLTLRAASGSSDIAVRWDIALRDLDYV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEEEEHHHHCCHHH LQLDRDGNGELTWGEVRQRSDEITRLATSRLELTVADKPCAWVTSGPLALDKHSDGTYAV EEECCCCCCCEEHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCEEEECCCCCCEEH LSLTAQCASLTSALKARYSLLFDVDPSHRGLVQWIAPGAESAQALVFGTDSAEQALALQP HHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHCCCCCCCCCEEEEECCCHHHHEEECC AGAWQTLRQYLLDGVWHIWIGYDHILFLLALLLPSVLMRRQGQWEPAPRLSGAVKEVVKV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH VTAFTLAHSITLSLAALQIISLPTRLVESAIAASVVVAALNNLRGTIEGRRWVMAFVFGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHH LHGFGFASVLADLGLPQNALVLALVGFNAGVEVGQLAIVAVFLPLAFWLRATRFYRVGVL HHHCCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVGSLLVALLASWWLVQRLFDL HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA