| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787838
Identifier: 91787838
GI number: 91787838
Start: 2028644
End: 2029852
Strand: Reverse
Name: 91787838
Synonym: Bpro_1962
Alternate gene names: NA
Gene position: 2029852-2028644 (Counterclockwise)
Preceding gene: 91787839
Following gene: 91787837
Centisome position: 39.03
GC content: 70.22
Gene sequence:
>1209_bases ATGTTTTTACCTACGTATGCACGGCGCGCCGCCGGCGCCGCGCTGCTGGGCCTTGCCAGCCTGCTTTGTCCGGCCATTCA GGCCGCCCCCTATACCCCCGCCAGTGATTCAGAAGTCGTCGAGCGCCTGCCCGGCCGGGCCAGCGACCCGGCGCTCAGGC GTGTCGAGTCGCTGCGCCGGCAACTCGCTGCCCGCCCGGACGACGCCACCCTGCGGGTAGAAATCGCGCGGCGCTATTTC GACATGGCCATGGCCGAGGGCGACCCGCGCTACGTGGGTTACGCCTCCGCGACGATCGCTCCGCTGGCCTCGCCGGCTGC GGCCGGGTCCGGCTACTGGCTGCTGCATGGGCTGATCCAGCAATACAGCCACAACTTCGAAGGCGCTCTGGCCAGCCTGG CCAAAGCCAGCCAGCTGGACCCCGCCTCGCCCGAGCCCCTGTCGTGGCGGGCCGCCGTCTTCATGGTGCAGGCGCGCTAC GCCGAAGCCCTGGCCGACTGCGAGCGGCTGACGCCGCTGGCCGAGCCGCTGCTAGGTGCGGGCTGCATCGCCTACGTCCG GGCCACCACAGGCCAGCTCGAGGCCGCCTTCGGGCAACTGGCCGCCGCTGGCAAGGCCGCACCGCAAACCTCCCCTGAAT TGCTGCTGTGGCTTGACACCCGGCTGGCGGAAATGGCGTGGCGGCTGCAGCGTCACGACGCCGCGGAGGGCTACTTCCGG GATGCGCTCAAGCAAGGCATCACCGACCAGTTTCTGCTGGGAGCCTATGCGGATTTCCTGCTGGCACACCAGCGACCGGC AGAGGTGCTGAAGCTGCTGGCGGGCTGGGAACGTTCCGACGTCCTGCTGCTGCGGCTGGCGCTGGCGGGCGCTTCGGCGG GCGACACACGCGCAGGCGACTGGGCCGGGCAGCTACGCGATCGCTTCCAGGCCGCGGCGCAGCGTGGCGACCGCCTGCAC GAGCAAGAGGCGGCACGCTTCGAGCTAGACATCGAACACAACGCCGCCAAGGCGCTGGAACTGGCGGCCCGCAACTACCA GGTCCAGAAAGAGCCGCGCGATGCCGGCATCCTGCTGCGTGCCGCGCTCGCCGCCGGCCAGGCCAAGGCCGCGCAGCCCG CCCTCGACTGGTTGCGCACCAGCCGCTACGAAGATCCGGCATTTGACAAACTCGCCACGCAGCTGGCCGCCCAGGGAGCC ACACGATGA
Upstream 100 bases:
>100_bases GTCTGGGTGACGCGGGCGACCGGATCTTCGGCACCAAGTAGCCGTCAGGCAATCGCTAGCAATCGCCAGGCAACCGGTAG GCAGCCGCTACACTCCCCGC
Downstream 100 bases:
>100_bases AGCGCGGCCTTGTGAAGCGCTTCCTTGTACTGCTGGCCGCCCTGCTCCTGCAAGTCTTGCAAGGCACGGCCTGGGCCCAC AAGCCCAGCGACAGCTACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MFLPTYARRAAGAALLGLASLLCPAIQAAPYTPASDSEVVERLPGRASDPALRRVESLRRQLAARPDDATLRVEIARRYF DMAMAEGDPRYVGYASATIAPLASPAAAGSGYWLLHGLIQQYSHNFEGALASLAKASQLDPASPEPLSWRAAVFMVQARY AEALADCERLTPLAEPLLGAGCIAYVRATTGQLEAAFGQLAAAGKAAPQTSPELLLWLDTRLAEMAWRLQRHDAAEGYFR DALKQGITDQFLLGAYADFLLAHQRPAEVLKLLAGWERSDVLLLRLALAGASAGDTRAGDWAGQLRDRFQAAAQRGDRLH EQEAARFELDIEHNAAKALELAARNYQVQKEPRDAGILLRAALAAGQAKAAQPALDWLRTSRYEDPAFDKLATQLAAQGA TR
Sequences:
>Translated_402_residues MFLPTYARRAAGAALLGLASLLCPAIQAAPYTPASDSEVVERLPGRASDPALRRVESLRRQLAARPDDATLRVEIARRYF DMAMAEGDPRYVGYASATIAPLASPAAAGSGYWLLHGLIQQYSHNFEGALASLAKASQLDPASPEPLSWRAAVFMVQARY AEALADCERLTPLAEPLLGAGCIAYVRATTGQLEAAFGQLAAAGKAAPQTSPELLLWLDTRLAEMAWRLQRHDAAEGYFR DALKQGITDQFLLGAYADFLLAHQRPAEVLKLLAGWERSDVLLLRLALAGASAGDTRAGDWAGQLRDRFQAAAQRGDRLH EQEAARFELDIEHNAAKALELAARNYQVQKEPRDAGILLRAALAAGQAKAAQPALDWLRTSRYEDPAFDKLATQLAAQGA TR >Mature_402_residues MFLPTYARRAAGAALLGLASLLCPAIQAAPYTPASDSEVVERLPGRASDPALRRVESLRRQLAARPDDATLRVEIARRYF DMAMAEGDPRYVGYASATIAPLASPAAAGSGYWLLHGLIQQYSHNFEGALASLAKASQLDPASPEPLSWRAAVFMVQARY AEALADCERLTPLAEPLLGAGCIAYVRATTGQLEAAFGQLAAAGKAAPQTSPELLLWLDTRLAEMAWRLQRHDAAEGYFR DALKQGITDQFLLGAYADFLLAHQRPAEVLKLLAGWERSDVLLLRLALAGASAGDTRAGDWAGQLRDRFQAAAQRGDRLH EQEAARFELDIEHNAAKALELAARNYQVQKEPRDAGILLRAALAAGQAKAAQPALDWLRTSRYEDPAFDKLATQLAAQGA TR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43453; Mature: 43453
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLPTYARRAAGAALLGLASLLCPAIQAAPYTPASDSEVVERLPGRASDPALRRVESLRR CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH QLAARPDDATLRVEIARRYFDMAMAEGDPRYVGYASATIAPLASPAAAGSGYWLLHGLIQ HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCCCHHHHHHHHH QYSHNFEGALASLAKASQLDPASPEPLSWRAAVFMVQARYAEALADCERLTPLAEPLLGA HHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH GCIAYVRATTGQLEAAFGQLAAAGKAAPQTSPELLLWLDTRLAEMAWRLQRHDAAEGYFR HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH DALKQGITDQFLLGAYADFLLAHQRPAEVLKLLAGWERSDVLLLRLALAGASAGDTRAGD HHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCH WAGQLRDRFQAAAQRGDRLHEQEAARFELDIEHNAAKALELAARNYQVQKEPRDAGILLR HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHH AALAAGQAKAAQPALDWLRTSRYEDPAFDKLATQLAAQGATR HHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MFLPTYARRAAGAALLGLASLLCPAIQAAPYTPASDSEVVERLPGRASDPALRRVESLRR CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH QLAARPDDATLRVEIARRYFDMAMAEGDPRYVGYASATIAPLASPAAAGSGYWLLHGLIQ HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCCCHHHHHHHHH QYSHNFEGALASLAKASQLDPASPEPLSWRAAVFMVQARYAEALADCERLTPLAEPLLGA HHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH GCIAYVRATTGQLEAAFGQLAAAGKAAPQTSPELLLWLDTRLAEMAWRLQRHDAAEGYFR HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH DALKQGITDQFLLGAYADFLLAHQRPAEVLKLLAGWERSDVLLLRLALAGASAGDTRAGD HHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCH WAGQLRDRFQAAAQRGDRLHEQEAARFELDIEHNAAKALELAARNYQVQKEPRDAGILLR HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHH AALAAGQAKAAQPALDWLRTSRYEDPAFDKLATQLAAQGATR HHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA