| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787808
Identifier: 91787808
GI number: 91787808
Start: 1990661
End: 1991593
Strand: Direct
Name: 91787808
Synonym: Bpro_1931
Alternate gene names: NA
Gene position: 1990661-1991593 (Clockwise)
Preceding gene: 91787807
Following gene: 91787809
Centisome position: 38.28
GC content: 55.2
Gene sequence:
>933_bases ATGTCTGATGAAGAAGGGCGGAAGGCGCCTGGCAAGCTGAACATTGTGGGCCTGTTCGAGGCCGAGGCTGCTTCCTTGTT GCATGCTGTCGAACGCGGACGTCTACTCCATAAGACCAGGAACATCAGGGACTCGGGTGCCCTCCTGGAGAGCCGGTTCT GTGAGATCATCGGCAGCAGACTCCCGCCACAAACGCAGCTTGCCCACGGCTACCTGTTCGACGTGGACTCGACCTGCACG CCCCAGATCGATGCAATGCTACTAAGCGCCGCCGACAACCATCCCATGATGGCAGGGGAAGGTGGTGCTATCTATGCTCC TTTCACGAGCTGCAAAGCCTACGTGGAAATCAAGTCAGCCGTCGGTGATGCCGCGAAGCAATTGGGGCAAACCGCAAAGA TTGCCGAACGGATCAAGGAGATGAGAACTTCACTTCTGAGTCGGCAGCCCGACTCATTCAGGTTTGAGCGCATTGCTTCA GTGCTGTTATTCGTGCAATCCGAAGGCGCGAAAGCGGCTGACTTCATCAATTGGTACAAGGAATCGCGCTGGCCCCCGAC TTTGGTTGTCTTCCTTGACAAGGCACTGGTCATTGCGCAACGCCCAGCCTTGTACAATTTCGTGAAAATGTACAACGAGG AGACACTCACCTTTGAAGAGTCGCTTTCTGGCACGGATGCATGGCTTTATCGGCCCGCAGGTGATGACCCGACTGAGGCG AGAGGGCGCGTTCTTCTATGGCTCTACTATTTCCTGCTCTATTGCGCGACGGAACGTGAGGTCAAAAAAGCGTCGGAAGA TGGAAACAACGACCACGGCCAAGCTAGGGCTGAGATTCCTCCGGTCAAGGCATTCATAATCGCTGCAAGTCGGCAGTTCC CCTTAGTTCCTGTTCAGGAGCTGCAAAAGGTAACGGATTTTGGGGGCTCGTGA
Upstream 100 bases:
>100_bases GCACGGAAGAACAGGACCCCAGGTCTTCGCGCAATCGACCTCGCGATATCCAGCTGCGAATCACGGCATGACACCAATAT GAGACGAAAGGGATGGATTT
Downstream 100 bases:
>100_bases ACGCCGGCTGATGCTACTGGACGACCGGGGTTACCAACTAGACAGCCGGGCGTTTGCCCCTCCCTTTTCTCGGCAATAGG ACGATGTCTGCCTCTGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSDEEGRKAPGKLNIVGLFEAEAASLLHAVERGRLLHKTRNIRDSGALLESRFCEIIGSRLPPQTQLAHGYLFDVDSTCT PQIDAMLLSAADNHPMMAGEGGAIYAPFTSCKAYVEIKSAVGDAAKQLGQTAKIAERIKEMRTSLLSRQPDSFRFERIAS VLLFVQSEGAKAADFINWYKESRWPPTLVVFLDKALVIAQRPALYNFVKMYNEETLTFEESLSGTDAWLYRPAGDDPTEA RGRVLLWLYYFLLYCATEREVKKASEDGNNDHGQARAEIPPVKAFIIAASRQFPLVPVQELQKVTDFGGS
Sequences:
>Translated_310_residues MSDEEGRKAPGKLNIVGLFEAEAASLLHAVERGRLLHKTRNIRDSGALLESRFCEIIGSRLPPQTQLAHGYLFDVDSTCT PQIDAMLLSAADNHPMMAGEGGAIYAPFTSCKAYVEIKSAVGDAAKQLGQTAKIAERIKEMRTSLLSRQPDSFRFERIAS VLLFVQSEGAKAADFINWYKESRWPPTLVVFLDKALVIAQRPALYNFVKMYNEETLTFEESLSGTDAWLYRPAGDDPTEA RGRVLLWLYYFLLYCATEREVKKASEDGNNDHGQARAEIPPVKAFIIAASRQFPLVPVQELQKVTDFGGS >Mature_309_residues SDEEGRKAPGKLNIVGLFEAEAASLLHAVERGRLLHKTRNIRDSGALLESRFCEIIGSRLPPQTQLAHGYLFDVDSTCTP QIDAMLLSAADNHPMMAGEGGAIYAPFTSCKAYVEIKSAVGDAAKQLGQTAKIAERIKEMRTSLLSRQPDSFRFERIASV LLFVQSEGAKAADFINWYKESRWPPTLVVFLDKALVIAQRPALYNFVKMYNEETLTFEESLSGTDAWLYRPAGDDPTEAR GRVLLWLYYFLLYCATEREVKKASEDGNNDHGQARAEIPPVKAFIIAASRQFPLVPVQELQKVTDFGGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34468; Mature: 34336
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEEGRKAPGKLNIVGLFEAEAASLLHAVERGRLLHKTRNIRDSGALLESRFCEIIGSR CCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC LPPQTQLAHGYLFDVDSTCTPQIDAMLLSAADNHPMMAGEGGAIYAPFTSCKAYVEIKSA CCCCHHHHCCEEEECCCCCCCHHHHHHHHCCCCCCCEECCCCEEECCHHHHHHHHHHHHH VGDAAKQLGQTAKIAERIKEMRTSLLSRQPDSFRFERIASVLLFVQSEGAKAADFINWYK HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH ESRWPPTLVVFLDKALVIAQRPALYNFVKMYNEETLTFEESLSGTDAWLYRPAGDDPTEA HCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHCCCCEEHHHHCCCCCEEEEECCCCCCCHH RGRVLLWLYYFLLYCATEREVKKASEDGNNDHGQARAEIPPVKAFIIAASRQFPLVPVQE HCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCHHH LQKVTDFGGS HHHHHCCCCC >Mature Secondary Structure SDEEGRKAPGKLNIVGLFEAEAASLLHAVERGRLLHKTRNIRDSGALLESRFCEIIGSR CCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC LPPQTQLAHGYLFDVDSTCTPQIDAMLLSAADNHPMMAGEGGAIYAPFTSCKAYVEIKSA CCCCHHHHCCEEEECCCCCCCHHHHHHHHCCCCCCCEECCCCEEECCHHHHHHHHHHHHH VGDAAKQLGQTAKIAERIKEMRTSLLSRQPDSFRFERIASVLLFVQSEGAKAADFINWYK HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH ESRWPPTLVVFLDKALVIAQRPALYNFVKMYNEETLTFEESLSGTDAWLYRPAGDDPTEA HCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHCCCCEEHHHHCCCCCEEEEECCCCCCCHH RGRVLLWLYYFLLYCATEREVKKASEDGNNDHGQARAEIPPVKAFIIAASRQFPLVPVQE HCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCHHH LQKVTDFGGS HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA