| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787809
Identifier: 91787809
GI number: 91787809
Start: 1991993
End: 1992685
Strand: Direct
Name: 91787809
Synonym: Bpro_1932
Alternate gene names: NA
Gene position: 1991993-1992685 (Clockwise)
Preceding gene: 91787808
Following gene: 91787814
Centisome position: 38.31
GC content: 62.19
Gene sequence:
>693_bases TTGATGCGGAAGTTTAGCGAAAACATGCCCGAACACCCGAACAGCGAAGCCCTTGCTCGTCGTGTTGTGCGACGAAACCA CGGAGAGGATGGCGCGGCTTCGGAGATAGCCCCCTCGGAGGGGTCACCGACCCGCTCCGAGCGCTACCCCGTCCAACTGA TGAGCTGGGCGACCTCCCCCTACTTCGGGGCGCAGGAGAATGAAGACATGGTTCGGTGCATCCTAGGGGCCAGCAAGCCA GCTCGACGTATGAACTGGGATGCCGAGATCGGCAACTGGCGGGTTGAAATAAAACTCAGTACGGACAGGACGCGTCCCAA ATGGAGCGGCCTCCTCAGGAAGGGAAAACTTCCCTGGCATCACATCGTGCTTGTTTGGCGCCGCCCGGTTCCAGCGCCGA ACAAAGACCATCCGTTGGACGCTCGTTTCATTTTCATCGTCCTTCGGCGTCAGACGGTCGTCGCGCTGGTAGGGCACCAG ACGAATAACAACAAGAATGGCGGCCAGTTCAACATCCCGGCCTACATCCTTCGGGGCGGCATGCCCAGGTTCGGCTGCAG GCCGCCTGGGCGAGAAGTCCCGTACTTGCGAGCAGGGAGGCGCAGCCTGCAGGAGTTGGAGGCGTTCGGCGCTGACCTCG CAGCCACCCCGCCTAAGCCGCCGCTGATGCGTCGTCCGCGCCCCCACCTGTGA
Upstream 100 bases:
>100_bases GGGCCGCGTGAGTAAGATCGTTAGCCATCCCGCAGGGTAGACTCAGACAACCTCGACGGTTCAAAATGCCCGGGCTCTTT AACCCCTTTCTGATCAATCC
Downstream 100 bases:
>100_bases CGCTGCATCAGCGGCGTTCGACCGCAGATGGCCTCACCACAGTCCAAGAGCCATGGCCGCATGACTCAGCTCCCACGCGA GATCTCATCGAGTTAGGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MMRKFSENMPEHPNSEALARRVVRRNHGEDGAASEIAPSEGSPTRSERYPVQLMSWATSPYFGAQENEDMVRCILGASKP ARRMNWDAEIGNWRVEIKLSTDRTRPKWSGLLRKGKLPWHHIVLVWRRPVPAPNKDHPLDARFIFIVLRRQTVVALVGHQ TNNNKNGGQFNIPAYILRGGMPRFGCRPPGREVPYLRAGRRSLQELEAFGADLAATPPKPPLMRRPRPHL
Sequences:
>Translated_230_residues MMRKFSENMPEHPNSEALARRVVRRNHGEDGAASEIAPSEGSPTRSERYPVQLMSWATSPYFGAQENEDMVRCILGASKP ARRMNWDAEIGNWRVEIKLSTDRTRPKWSGLLRKGKLPWHHIVLVWRRPVPAPNKDHPLDARFIFIVLRRQTVVALVGHQ TNNNKNGGQFNIPAYILRGGMPRFGCRPPGREVPYLRAGRRSLQELEAFGADLAATPPKPPLMRRPRPHL >Mature_230_residues MMRKFSENMPEHPNSEALARRVVRRNHGEDGAASEIAPSEGSPTRSERYPVQLMSWATSPYFGAQENEDMVRCILGASKP ARRMNWDAEIGNWRVEIKLSTDRTRPKWSGLLRKGKLPWHHIVLVWRRPVPAPNKDHPLDARFIFIVLRRQTVVALVGHQ TNNNKNGGQFNIPAYILRGGMPRFGCRPPGREVPYLRAGRRSLQELEAFGADLAATPPKPPLMRRPRPHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26217; Mature: 26217
Theoretical pI: Translated: 11.50; Mature: 11.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRKFSENMPEHPNSEALARRVVRRNHGEDGAASEIAPSEGSPTRSERYPVQLMSWATSP CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC YFGAQENEDMVRCILGASKPARRMNWDAEIGNWRVEIKLSTDRTRPKWSGLLRKGKLPWH CCCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCE HIVLVWRRPVPAPNKDHPLDARFIFIVLRRQTVVALVGHQTNNNKNGGQFNIPAYILRGG EEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCEECCCHHEEECC MPRFGCRPPGREVPYLRAGRRSLQELEAFGADLAATPPKPPLMRRPRPHL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMRKFSENMPEHPNSEALARRVVRRNHGEDGAASEIAPSEGSPTRSERYPVQLMSWATSP CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC YFGAQENEDMVRCILGASKPARRMNWDAEIGNWRVEIKLSTDRTRPKWSGLLRKGKLPWH CCCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCE HIVLVWRRPVPAPNKDHPLDARFIFIVLRRQTVVALVGHQTNNNKNGGQFNIPAYILRGG EEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCEECCCHHEEECC MPRFGCRPPGREVPYLRAGRRSLQELEAFGADLAATPPKPPLMRRPRPHL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA