| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787805
Identifier: 91787805
GI number: 91787805
Start: 1987749
End: 1988480
Strand: Direct
Name: 91787805
Synonym: Bpro_1928
Alternate gene names: NA
Gene position: 1987749-1988480 (Clockwise)
Preceding gene: 91787804
Following gene: 91787806
Centisome position: 38.22
GC content: 54.64
Gene sequence:
>732_bases GTGACTCGTCAAAAACAACCTGATCCGGCTAGCAGCATTCTCGACGGCGCTATTCGGACACTCAAGCACTTAGGTGCGCC GGTAAAAGACTATCTTCTAGCGCAGGTTGGGCTCTCAGCGCATGATCTGCGCATCTTCGTGTCGGGTGCCCACGTTCTCA AGCTGGGCCGTCAAATCTCGCATAACCCCGAGATTCCTTTTGATTATGAATGGTCACGGAAAATGACGCCCCAACCTATT CAGATACTCAACGCTTCGAGCACGTCTCCCGCGCTCTTGGCGTGCCACCTACTAGTTGACTGGCTTGACGCAGGGAAAGA CTTCGCTGCGCTGGTCAACTCACCCGGAGGAAATACGCACGGTCTCATTTGGGAAGAGGACTTCCTTTTGCCTGGCATCG AGAACGGAAAGCCGTCGCATGAAGTGCCGGTGCTCACGAAGGGGCATGTACAGACTCTTCGCTTTGCGTCCTCCCAGTAC ATTTACGACAAAGAGGTGCATGTTTGGGCAAATCACGAAGGCGCATACCGCGGCGAGCTGATCGTGGGAACTGTGCCCGA GCCGTTGTCAGCCCGAGCCAGAAGAGTCCTGTCTGGGTCCGTCGAGAACGCTCGCATCCAACTTCTTGTCATCCTTGACA ACGAGGAGGTCTTGCCATTCCTATGGAACAACCAAAGCATGCGCTTTGTGCCGGGATTTAACTCACTTGGCATTACGACG CGTGAGCCATAG
Upstream 100 bases:
>100_bases CATGTCAGTCAACGCGGACGCCCAGGGGCGTTCGGTCGTCGCGCGGCCTACCTTGAGTGGGCGCCGGTTACTTTTACGTT AGATTCCCAGGGAGACTCCT
Downstream 100 bases:
>100_bases GGAATCTAACCAGCCCATGCAGCGGACAGTCGAAAGCGGCGCTTTGCTTGCTTTCTCCTGCCGCTGATGGGCAACGTTGA GGCTGTATTTTTAGTCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTRQKQPDPASSILDGAIRTLKHLGAPVKDYLLAQVGLSAHDLRIFVSGAHVLKLGRQISHNPEIPFDYEWSRKMTPQPI QILNASSTSPALLACHLLVDWLDAGKDFAALVNSPGGNTHGLIWEEDFLLPGIENGKPSHEVPVLTKGHVQTLRFASSQY IYDKEVHVWANHEGAYRGELIVGTVPEPLSARARRVLSGSVENARIQLLVILDNEEVLPFLWNNQSMRFVPGFNSLGITT REP
Sequences:
>Translated_243_residues MTRQKQPDPASSILDGAIRTLKHLGAPVKDYLLAQVGLSAHDLRIFVSGAHVLKLGRQISHNPEIPFDYEWSRKMTPQPI QILNASSTSPALLACHLLVDWLDAGKDFAALVNSPGGNTHGLIWEEDFLLPGIENGKPSHEVPVLTKGHVQTLRFASSQY IYDKEVHVWANHEGAYRGELIVGTVPEPLSARARRVLSGSVENARIQLLVILDNEEVLPFLWNNQSMRFVPGFNSLGITT REP >Mature_242_residues TRQKQPDPASSILDGAIRTLKHLGAPVKDYLLAQVGLSAHDLRIFVSGAHVLKLGRQISHNPEIPFDYEWSRKMTPQPIQ ILNASSTSPALLACHLLVDWLDAGKDFAALVNSPGGNTHGLIWEEDFLLPGIENGKPSHEVPVLTKGHVQTLRFASSQYI YDKEVHVWANHEGAYRGELIVGTVPEPLSARARRVLSGSVENARIQLLVILDNEEVLPFLWNNQSMRFVPGFNSLGITTR EP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26904; Mature: 26773
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRQKQPDPASSILDGAIRTLKHLGAPVKDYLLAQVGLSAHDLRIFVSGAHVLKLGRQIS CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHC HNPEIPFDYEWSRKMTPQPIQILNASSTSPALLACHLLVDWLDAGKDFAALVNSPGGNTH CCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEHCCCCCCCCC GLIWEEDFLLPGIENGKPSHEVPVLTKGHVQTLRFASSQYIYDKEVHVWANHEGAYRGEL CEEEECCCCCCCCCCCCCCCCCCEEECCCHHEEEHHCCCEEEECEEEEEECCCCCEECEE IVGTVPEPLSARARRVLSGSVENARIQLLVILDNEEVLPFLWNNQSMRFVPGFNSLGITT EEECCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECCCCEEEECCCCCCCCEE REP CCC >Mature Secondary Structure TRQKQPDPASSILDGAIRTLKHLGAPVKDYLLAQVGLSAHDLRIFVSGAHVLKLGRQIS CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHC HNPEIPFDYEWSRKMTPQPIQILNASSTSPALLACHLLVDWLDAGKDFAALVNSPGGNTH CCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEHCCCCCCCCC GLIWEEDFLLPGIENGKPSHEVPVLTKGHVQTLRFASSQYIYDKEVHVWANHEGAYRGEL CEEEECCCCCCCCCCCCCCCCCCEEECCCHHEEEHHCCCEEEECEEEEEECCCCCEECEE IVGTVPEPLSARARRVLSGSVENARIQLLVILDNEEVLPFLWNNQSMRFVPGFNSLGITT EEECCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECCCCEEEECCCCCCCCEE REP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA