| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787804
Identifier: 91787804
GI number: 91787804
Start: 1986991
End: 1987626
Strand: Direct
Name: 91787804
Synonym: Bpro_1927
Alternate gene names: NA
Gene position: 1986991-1987626 (Clockwise)
Preceding gene: 91787803
Following gene: 91787805
Centisome position: 38.21
GC content: 59.91
Gene sequence:
>636_bases GTGAAACGACCTGCCCAACGCGGACTGCCTGATCAGCCCGGCGCATTCGCCAGGCAGTTCGTGCTGGATCGACTCGCGGG CTTTGAGAAGGACATGGGCATCTGTCTTACCCCTGCGCCGTCGAAAACGAGGGCCGGGCCAACCCATGCTTACTTCCCGG CTCTAGCTGCGTGCTGCGGGACGCTCGAGTATTTGTCGGCCCTGTATCGCGGACGGATCAATGGCGTGGGTTGGCCCGAC GTGGCGAGATGGGCAGTGCGTTACCTTCCCCAACCGGACTATGGAGAAGACGCAGTCCGGGTTCTCGTTGATGCCTTCCG CAATGCGGTGGCGCATCGAGGAATAGCGACTGGCGTGTGGGTCGATCGCAACCCCGGGCCGGATCATGGACGCCGGCTGA CGTGGAAGGTGTTAGCGGATAGCCGTCGCCCTTCCGTTCGTATCGTTTCTGAGGAGGGTAAATTGCAAAGCGATCCGCCT TGGCCCTGCGCGTACACACATAGAGTGCATATCCATCTGAAGTCTATGTCGGTGGACATCCGTGAGGGCGCCGTTCAGTA CGCTGAAGATCTGCTTCGCGAGACTCAACTCTCGGACAGGTTCTACGGATGTATGCGCCAGCTATATCCCCAATGA
Upstream 100 bases:
>100_bases TGAGACCCAACCCTGCGTTCCAGCCGACCCGCTACAGCCAGCTTCGCTGGCTTACGCGGTCGGCTGAGCTTGAACGTTAT ACGGCTGGTGCGTTCCTCAC
Downstream 100 bases:
>100_bases GCCAAATGAAGGGACCGTGTAACATGTCAGTCAACGCGGACGCCCAGGGGCGTTCGGTCGTCGCGCGGCCTACCTTGAGT GGGCGCCGGTTACTTTTACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MKRPAQRGLPDQPGAFARQFVLDRLAGFEKDMGICLTPAPSKTRAGPTHAYFPALAACCGTLEYLSALYRGRINGVGWPD VARWAVRYLPQPDYGEDAVRVLVDAFRNAVAHRGIATGVWVDRNPGPDHGRRLTWKVLADSRRPSVRIVSEEGKLQSDPP WPCAYTHRVHIHLKSMSVDIREGAVQYAEDLLRETQLSDRFYGCMRQLYPQ
Sequences:
>Translated_211_residues MKRPAQRGLPDQPGAFARQFVLDRLAGFEKDMGICLTPAPSKTRAGPTHAYFPALAACCGTLEYLSALYRGRINGVGWPD VARWAVRYLPQPDYGEDAVRVLVDAFRNAVAHRGIATGVWVDRNPGPDHGRRLTWKVLADSRRPSVRIVSEEGKLQSDPP WPCAYTHRVHIHLKSMSVDIREGAVQYAEDLLRETQLSDRFYGCMRQLYPQ >Mature_211_residues MKRPAQRGLPDQPGAFARQFVLDRLAGFEKDMGICLTPAPSKTRAGPTHAYFPALAACCGTLEYLSALYRGRINGVGWPD VARWAVRYLPQPDYGEDAVRVLVDAFRNAVAHRGIATGVWVDRNPGPDHGRRLTWKVLADSRRPSVRIVSEEGKLQSDPP WPCAYTHRVHIHLKSMSVDIREGAVQYAEDLLRETQLSDRFYGCMRQLYPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23744; Mature: 23744
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRPAQRGLPDQPGAFARQFVLDRLAGFEKDMGICLTPAPSKTRAGPTHAYFPALAACCG CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHH TLEYLSALYRGRINGVGWPDVARWAVRYLPQPDYGEDAVRVLVDAFRNAVAHRGIATGVW HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE VDRNPGPDHGRRLTWKVLADSRRPSVRIVSEEGKLQSDPPWPCAYTHRVHIHLKSMSVDI EECCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCHH REGAVQYAEDLLRETQLSDRFYGCMRQLYPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRPAQRGLPDQPGAFARQFVLDRLAGFEKDMGICLTPAPSKTRAGPTHAYFPALAACCG CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHH TLEYLSALYRGRINGVGWPDVARWAVRYLPQPDYGEDAVRVLVDAFRNAVAHRGIATGVW HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE VDRNPGPDHGRRLTWKVLADSRRPSVRIVSEEGKLQSDPPWPCAYTHRVHIHLKSMSVDI EECCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCHH REGAVQYAEDLLRETQLSDRFYGCMRQLYPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA