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The map label for this gene is ygeK [C]

Identifier: 91787783

GI number: 91787783

Start: 1964953

End: 1965507

Strand: Reverse

Name: ygeK [C]

Synonym: Bpro_1904

Alternate gene names: 91787783

Gene position: 1965507-1964953 (Counterclockwise)

Preceding gene: 91787786

Following gene: 91787782

Centisome position: 37.8

GC content: 63.42

Gene sequence:

>555_bases
ATGGAAGTCGATTACCAGCTCGCCTTCGATTTGGCACCCGTCGGGCTCGTGCTGTCCCGAAACCGCTCCATTGTGGACTG
CAACCAGCATTTGTGCGAGATGTTTGGCGCCTCGCGCGAGCAGCTGGTGGGCCAGTCCTTTCTGGTGCTTTACCCGAGCG
TGGACGAGTACGAGCGCATCGGCGCCAGGATGATCCCCATACTCAACACCCGGGGCCTGTATGCCGACGATCGCATCATG
AAGCGGGTGGATGGCCACAACAAGGGCGAAACCTTCTGGTGCCACGTGACCGGGCGCGCGCTGAACCGCAGCGCACCGCA
TGAAGCCGGCATCTGGACCTTTGAAGACCTGAGTTCGCGCCGCCCCGTCACGGCAGAGCTGACGGCGCGCGAGCGCGAAG
TCGCCGCCCACCTGATGGACGGCATGACCTCCAAGGAAATTGGCCGCGCGCTGGTCATCAGCCACCGCACGGTAGAGATT
TACCGGGCGCGCCTGATGCGCAAGTACAAGGCCTCCACGACGGCCGACCTGGTGCACAAACTGATGGCCGGCTGA

Upstream 100 bases:

>100_bases
CAAATAGTCTCCTGATGTAATTCAGCGGTAGTTCAACGGGGAACAATCCAGTACGATACTACGTATTCTGATACGTAGTT
TTTCGTAAAGGTTAGCCCCC

Downstream 100 bases:

>100_bases
GGCCACCGGGCGCCGCAACAGGCGCGCAAGGCTCAAGCGTCCTGGACTGCTGACCCCGGTCAGCAGGATTTCCTGCCTGG
CAGCACAATCCGTCACACCA

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family; Transcriptional Regulator; Sigma-70 Region 4 Family; PAS/PAC Sensor Protein; Transcription Regulator Protein; Two-Component Sensor; LuxR Family Regulatory Protein; Transcriptional Regulator Luxr Family; Diguanylate Cyclase/Phosphodiesterase; PAS Domain-Containing Protein

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MEVDYQLAFDLAPVGLVLSRNRSIVDCNQHLCEMFGASREQLVGQSFLVLYPSVDEYERIGARMIPILNTRGLYADDRIM
KRVDGHNKGETFWCHVTGRALNRSAPHEAGIWTFEDLSSRRPVTAELTAREREVAAHLMDGMTSKEIGRALVISHRTVEI
YRARLMRKYKASTTADLVHKLMAG

Sequences:

>Translated_184_residues
MEVDYQLAFDLAPVGLVLSRNRSIVDCNQHLCEMFGASREQLVGQSFLVLYPSVDEYERIGARMIPILNTRGLYADDRIM
KRVDGHNKGETFWCHVTGRALNRSAPHEAGIWTFEDLSSRRPVTAELTAREREVAAHLMDGMTSKEIGRALVISHRTVEI
YRARLMRKYKASTTADLVHKLMAG
>Mature_184_residues
MEVDYQLAFDLAPVGLVLSRNRSIVDCNQHLCEMFGASREQLVGQSFLVLYPSVDEYERIGARMIPILNTRGLYADDRIM
KRVDGHNKGETFWCHVTGRALNRSAPHEAGIWTFEDLSSRRPVTAELTAREREVAAHLMDGMTSKEIGRALVISHRTVEI
YRARLMRKYKASTTADLVHKLMAG

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20864; Mature: 20864

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVDYQLAFDLAPVGLVLSRNRSIVDCNQHLCEMFGASREQLVGQSFLVLYPSVDEYERI
CCCCCEEEECCCCHHHEEECCCCEEHHHHHHHHHHCCCHHHHHCCEEEEEECCHHHHHHC
GARMIPILNTRGLYADDRIMKRVDGHNKGETFWCHVTGRALNRSAPHEAGIWTFEDLSSR
CCCCCCEECCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEHHHHCCC
RPVTAELTAREREVAAHLMDGMTSKEIGRALVISHRTVEIYRARLMRKYKASTTADLVHK
CCEEHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHH
LMAG
HHCC
>Mature Secondary Structure
MEVDYQLAFDLAPVGLVLSRNRSIVDCNQHLCEMFGASREQLVGQSFLVLYPSVDEYERI
CCCCCEEEECCCCHHHEEECCCCEEHHHHHHHHHHCCCHHHHHCCEEEEEECCHHHHHHC
GARMIPILNTRGLYADDRIMKRVDGHNKGETFWCHVTGRALNRSAPHEAGIWTFEDLSSR
CCCCCCEECCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEHHHHCCC
RPVTAELTAREREVAAHLMDGMTSKEIGRALVISHRTVEIYRARLMRKYKASTTADLVHK
CCEEHHHHHHHHHHHHHHHCCCCHHHHCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHH
LMAG
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA