| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787782
Identifier: 91787782
GI number: 91787782
Start: 1964324
End: 1964833
Strand: Reverse
Name: 91787782
Synonym: Bpro_1903
Alternate gene names: NA
Gene position: 1964833-1964324 (Counterclockwise)
Preceding gene: 91787783
Following gene: 91787778
Centisome position: 37.78
GC content: 59.41
Gene sequence:
>510_bases ATGCCACTGACCCTTTACCAGGCCTCAGTCCCCGTCTTCACCCGCGGCTTCAGCAATCTGGCCGCCGTGCTGGAAAAGGC CAGGGCCCACGCCCTGGCCAACAACATCGACCTGGCCACCTACCTCAACGCCCGCCTCGCGCCCGACATGTATCCACTGA CGGGCCAGATCCAGGGTGCCAGTGATGCGGCCAAGTTTGGCGTTGCACGGCTTGGCGGTGTTACGCCGCCCAGCATGGCC GACACCGAAACCACGTTCGAAGAACTGCAGGCCCGTATCGCCAACACCGTCGCATTCATGGGGACCGTGAGCGAGGCACA AATCAACGCCAGCGAAGGCGGCACCATCACCCTCAAGATACGCGGCAAGGAAATGAGTTTTCCCAGTGAGCCCTACCTGC TCAATTTTGTGATGCCCAATTTTTATTTTCACGTCACCACGGCCTATGCCATCCTGCGCAACCAGGGTGTGCCGCTGGGC AAGATGGATTTCCTCGGAAGTTTTAACTGA
Upstream 100 bases:
>100_bases AGGCGCGCAAGGCTCAAGCGTCCTGGACTGCTGACCCCGGTCAGCAGGATTTCCTGCCTGGCAGCACAATCCGTCACACC ACCCAACCGGAGAGTTTCCT
Downstream 100 bases:
>100_bases CAGCGCGTGCAGACCCGCAGACGCCAGTGATTTGACAGAAAACGCCTGGCGTAAACAGGCAGTGGGCTTGCAAATCCACG ACCCCTGGCCACGGCACTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MPLTLYQASVPVFTRGFSNLAAVLEKARAHALANNIDLATYLNARLAPDMYPLTGQIQGASDAAKFGVARLGGVTPPSMA DTETTFEELQARIANTVAFMGTVSEAQINASEGGTITLKIRGKEMSFPSEPYLLNFVMPNFYFHVTTAYAILRNQGVPLG KMDFLGSFN
Sequences:
>Translated_169_residues MPLTLYQASVPVFTRGFSNLAAVLEKARAHALANNIDLATYLNARLAPDMYPLTGQIQGASDAAKFGVARLGGVTPPSMA DTETTFEELQARIANTVAFMGTVSEAQINASEGGTITLKIRGKEMSFPSEPYLLNFVMPNFYFHVTTAYAILRNQGVPLG KMDFLGSFN >Mature_168_residues PLTLYQASVPVFTRGFSNLAAVLEKARAHALANNIDLATYLNARLAPDMYPLTGQIQGASDAAKFGVARLGGVTPPSMAD TETTFEELQARIANTVAFMGTVSEAQINASEGGTITLKIRGKEMSFPSEPYLLNFVMPNFYFHVTTAYAILRNQGVPLGK MDFLGSFN
Specific function: Unknown
COG id: COG3812
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18244; Mature: 18113
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTLYQASVPVFTRGFSNLAAVLEKARAHALANNIDLATYLNARLAPDMYPLTGQIQGA CCEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEECCC SDAAKFGVARLGGVTPPSMADTETTFEELQARIANTVAFMGTVSEAQINASEGGTITLKI CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEE RGKEMSFPSEPYLLNFVMPNFYFHVTTAYAILRNQGVPLGKMDFLGSFN ECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PLTLYQASVPVFTRGFSNLAAVLEKARAHALANNIDLATYLNARLAPDMYPLTGQIQGA CEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEECCC SDAAKFGVARLGGVTPPSMADTETTFEELQARIANTVAFMGTVSEAQINASEGGTITLKI CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEE RGKEMSFPSEPYLLNFVMPNFYFHVTTAYAILRNQGVPLGKMDFLGSFN ECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA