| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787786
Identifier: 91787786
GI number: 91787786
Start: 1967001
End: 1967582
Strand: Reverse
Name: 91787786
Synonym: Bpro_1907
Alternate gene names: NA
Gene position: 1967582-1967001 (Counterclockwise)
Preceding gene: 91787787
Following gene: 91787783
Centisome position: 37.84
GC content: 61.51
Gene sequence:
>582_bases ATGAGCAATGACACCCAGAGCATCATCCGCCACTGGCGCGAAGCCGTGCCCAATGACCGCCTTGCGCACCTGATCCGCGA TGCCTCGCGCGCCTTTCAAAAGGCCTTGCAGGTCCGCCTGGCGAAGCATGGGGTGCCGTTTGGCCACTGGACTTTTCTGC GCATCCTGTGGGAGTCCGACGGCCTCACGCAAAAGGAGCTCAGCGAGCGTGCCGGCGTGATGGAGCCCACCACCTTTTCG GCGATGAAAGCCATGGAAGCGCAGGGCTACATCGTTCGCAAGCAGCTGCCTACCAACAAGAAGAACGTGTATGTCTACCT GAGCGGCGAAGGCCGGGCCCTGAAGAAAAAGCTCGTGCCGCTGGCGGAGGACACCAACAACGTGAGCATTGAAGGCATTG CGGCGGAGGAGATCAGGATTGCCCGCAAGGTATTGCTCGCCATGATAGAAAACCTGGCCGCGGATGAGCTCCTGCAAGAC CCGCCCACCAGACGAAAGGCTGCGGCCTCCAAACCAGCCGGCCCATCGAAGAAGCCGGCCAACACCGCAGCGCCCGTCAA ACGCAAAAAAGCCGCCGCCTGA
Upstream 100 bases:
>100_bases GGGCACGGGCGACCACCGCCGTCTGCCTGGCCATTCTGGAATCAGCGAGGACGGGCAGGGACTGCCCTCCCGGGTACCAA GTCGGTCACAATACCAATTC
Downstream 100 bases:
>100_bases CGTTGCGTCGAGGCCGGCGGCTTTCAGGCTGAGCCCGATCAGATCAGATTAAATCAGCTTGACGCCGGTTTTCGCCTGCA GCGACTCTCTCGTCACGCCT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator MarR Family Protein; Transcriptional Regulator MarR
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MSNDTQSIIRHWREAVPNDRLAHLIRDASRAFQKALQVRLAKHGVPFGHWTFLRILWESDGLTQKELSERAGVMEPTTFS AMKAMEAQGYIVRKQLPTNKKNVYVYLSGEGRALKKKLVPLAEDTNNVSIEGIAAEEIRIARKVLLAMIENLAADELLQD PPTRRKAAASKPAGPSKKPANTAAPVKRKKAAA
Sequences:
>Translated_193_residues MSNDTQSIIRHWREAVPNDRLAHLIRDASRAFQKALQVRLAKHGVPFGHWTFLRILWESDGLTQKELSERAGVMEPTTFS AMKAMEAQGYIVRKQLPTNKKNVYVYLSGEGRALKKKLVPLAEDTNNVSIEGIAAEEIRIARKVLLAMIENLAADELLQD PPTRRKAAASKPAGPSKKPANTAAPVKRKKAAA >Mature_192_residues SNDTQSIIRHWREAVPNDRLAHLIRDASRAFQKALQVRLAKHGVPFGHWTFLRILWESDGLTQKELSERAGVMEPTTFSA MKAMEAQGYIVRKQLPTNKKNVYVYLSGEGRALKKKLVPLAEDTNNVSIEGIAAEEIRIARKVLLAMIENLAADELLQDP PTRRKAAASKPAGPSKKPANTAAPVKRKKAAA
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21415; Mature: 21284
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDTQSIIRHWREAVPNDRLAHLIRDASRAFQKALQVRLAKHGVPFGHWTFLRILWESD CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC GLTQKELSERAGVMEPTTFSAMKAMEAQGYIVRKQLPTNKKNVYVYLSGEGRALKKKLVP CCCHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCCCHHHHHHHCC LAEDTNNVSIEGIAAEEIRIARKVLLAMIENLAADELLQDPPTRRKAAASKPAGPSKKPA CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCC NTAAPVKRKKAAA CCCCCHHHHHCCC >Mature Secondary Structure SNDTQSIIRHWREAVPNDRLAHLIRDASRAFQKALQVRLAKHGVPFGHWTFLRILWESD CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC GLTQKELSERAGVMEPTTFSAMKAMEAQGYIVRKQLPTNKKNVYVYLSGEGRALKKKLVP CCCHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCCCHHHHHHHCC LAEDTNNVSIEGIAAEEIRIARKVLLAMIENLAADELLQDPPTRRKAAASKPAGPSKKPA CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCC NTAAPVKRKKAAA CCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA