| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787608
Identifier: 91787608
GI number: 91787608
Start: 1782453
End: 1783262
Strand: Reverse
Name: 91787608
Synonym: Bpro_1726
Alternate gene names: NA
Gene position: 1783262-1782453 (Counterclockwise)
Preceding gene: 91787609
Following gene: 91787607
Centisome position: 34.29
GC content: 60.62
Gene sequence:
>810_bases ATGAAACTCAATATTGTTCCCGCGCGTACCGGCATCACCTGGGTCAAGCTCGGCATCAAAACCTTCATGATGCAGCCGCT GGCCATGTCGGGCCTGTTCTTCATGTTCATGGCCATGCTCTCGCTGGCGACGCTGGTGCCCTTCATTGGCGCGGCGCTGG CACTCGCCCTGCTGCCCGCCGCCACCCTGGGCCTGATGGCTGCGACGCAGGAAGCCACCAAGGGCAAATTTCCAATGCCG TCGATTCTGATCAGCGCGTTTCGCGCCGGCCAGCAACGCATGCGGGCCATGATGGTGCTGGGCGGGCTGTACGCGGCAGG GTTTTTAACGCTGATGGGAATCTCGGCCCTGTTCGACGGCGGAGAATTTGCCAGGCTGTATCTTGTGGGTGGCAAGATCA CCGAAGAGCTGCTGCTGCAACGCGGTTTTCAAACGGCCATGTGGGTGGCGCTGGCTCTTTACCTGCCGCTGTCACTGCTG TTCTGGCATGCCCCGGCGCTGGTGCACTGGCATGGCGTGACGCCGATCAAAAGCCTGTTTTTCAGCCTCATGGCCTGCTA CAAGAATCTGGGCGCCCTGACCGTATTTGCTTTCGCCTGGACCGGCGTGTTTCTGTTTGCCGCCCTGCTGGTTTCATTGA TTGCCAGCGTGCTGGGCAACCCCGCGCTCGCAACGGTCGTGATGTTTCCCGTGGCGCTGGTCATCGTGGCGATGTTTTTT ACCTCGATTTACTTCACCTTCCGGGACAGCTTCCTGGCCACGCCCGAGCTACCCACCGACTCCGGTGACCAGCCAGCCGA TCTCTCCTGA
Upstream 100 bases:
>100_bases AATTTATGCGTCATCCGGCGTTGTCGCAGATCCTTGAACAGGTTTGCCCTGTCCCCTGCCCCCTTTTACATCCTATTTTC GGCCCGTCCCTGTCAACACC
Downstream 100 bases:
>100_bases GCGCGGACTGAACATCGCAGAAGCAACCGGCCGGGCATTCACAGGCAAGGCTCATACGCGAGCCTGATCCCCGCATATCC CGGCAAGCCTGGGGCGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Superfamily Transporter
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MKLNIVPARTGITWVKLGIKTFMMQPLAMSGLFFMFMAMLSLATLVPFIGAALALALLPAATLGLMAATQEATKGKFPMP SILISAFRAGQQRMRAMMVLGGLYAAGFLTLMGISALFDGGEFARLYLVGGKITEELLLQRGFQTAMWVALALYLPLSLL FWHAPALVHWHGVTPIKSLFFSLMACYKNLGALTVFAFAWTGVFLFAALLVSLIASVLGNPALATVVMFPVALVIVAMFF TSIYFTFRDSFLATPELPTDSGDQPADLS
Sequences:
>Translated_269_residues MKLNIVPARTGITWVKLGIKTFMMQPLAMSGLFFMFMAMLSLATLVPFIGAALALALLPAATLGLMAATQEATKGKFPMP SILISAFRAGQQRMRAMMVLGGLYAAGFLTLMGISALFDGGEFARLYLVGGKITEELLLQRGFQTAMWVALALYLPLSLL FWHAPALVHWHGVTPIKSLFFSLMACYKNLGALTVFAFAWTGVFLFAALLVSLIASVLGNPALATVVMFPVALVIVAMFF TSIYFTFRDSFLATPELPTDSGDQPADLS >Mature_269_residues MKLNIVPARTGITWVKLGIKTFMMQPLAMSGLFFMFMAMLSLATLVPFIGAALALALLPAATLGLMAATQEATKGKFPMP SILISAFRAGQQRMRAMMVLGGLYAAGFLTLMGISALFDGGEFARLYLVGGKITEELLLQRGFQTAMWVALALYLPLSLL FWHAPALVHWHGVTPIKSLFFSLMACYKNLGALTVFAFAWTGVFLFAALLVSLIASVLGNPALATVVMFPVALVIVAMFF TSIYFTFRDSFLATPELPTDSGDQPADLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29054; Mature: 29054
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNIVPARTGITWVKLGIKTFMMQPLAMSGLFFMFMAMLSLATLVPFIGAALALALLPA CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLGLMAATQEATKGKFPMPSILISAFRAGQQRMRAMMVLGGLYAAGFLTLMGISALFDG HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GEFARLYLVGGKITEELLLQRGFQTAMWVALALYLPLSLLFWHAPALVHWHGVTPIKSLF CCEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCHHHHHH FSLMACYKNLGALTVFAFAWTGVFLFAALLVSLIASVLGNPALATVVMFPVALVIVAMFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH TSIYFTFRDSFLATPELPTDSGDQPADLS HHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLNIVPARTGITWVKLGIKTFMMQPLAMSGLFFMFMAMLSLATLVPFIGAALALALLPA CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLGLMAATQEATKGKFPMPSILISAFRAGQQRMRAMMVLGGLYAAGFLTLMGISALFDG HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GEFARLYLVGGKITEELLLQRGFQTAMWVALALYLPLSLLFWHAPALVHWHGVTPIKSLF CCEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCHHHHHH FSLMACYKNLGALTVFAFAWTGVFLFAALLVSLIASVLGNPALATVVMFPVALVIVAMFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH TSIYFTFRDSFLATPELPTDSGDQPADLS HHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA