| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is thrB [H]
Identifier: 91787609
GI number: 91787609
Start: 1783463
End: 1784413
Strand: Reverse
Name: thrB [H]
Synonym: Bpro_1727
Alternate gene names: 91787609
Gene position: 1784413-1783463 (Counterclockwise)
Preceding gene: 91787610
Following gene: 91787608
Centisome position: 34.31
GC content: 62.46
Gene sequence:
>951_bases ATGGCCGTTTTTACCGAGGTCTCGTTTGACGAGGCCGCAGCGTTCTTGAACGCCTTGAATTTGGGGCAACTGCAGAGCAT CAAGGGCGCTGCAGGCGGCATCGAAAACACCAACTACTTTGTAGACACCGATCAGGGCCATTACGTGCTGACGCTGTTCG AGCGCCTGACGTTCGAACAACTGCCGTATTACCTGCACCTGATGAAACACCTGGCGGCACGTGGCATTCCGGTGCCCGAT CCGGCCGAAAACGGCAAGGGTGAGATCCTCCACCGGCTGAAGGGCAAGCCGACTGCCGTGGTCAACAAGCTGCGTGGCCA CAGCGAACTCGCCCCCACACCCGCGCACTGCGCTGCCGTAGGCGAGATGCTGGCCCGCATGCACCTGGCCGGGCTGGACT ACCCGCGCCAGCAGCCCAACCTGCGCGGCCTCGCCTGGTGGAACGAAACTGTGCCCGTGGTGCTGCCGCACCTCACGCCA GAGCAGCGCAGCCTGATCCTGGGTGAATTGGCTTATCAGAACCATGTCACCGACTCATCGGCCTGCCGCAGCCTGCCGCG GGGCGCGGTGCACGCCGACCTGTTTCGTGACAACGTCATGTTTGAGGACGGCAAGCTCACCGGGTTTTTTGATTTTTATT TTGCCGGCTGCGATACCTTTTTGTTTGATATCGGGGTTTGTCTCAATGACTGGTGCATTGATCTGGACAGCGGTGCGCAG GACAGCGCGCGTGCCGATGCTTTCGTGGCCGCCTACCAGAGCGTGCGCCGCCTGACTGCGCAGGAGCGCACCTTGCTGCC GGCCATGCAACGCGCCGGGGCGCTGCGCTTCTGGATCTCACGGCTGTGGGACTTTCATTTGCCGCGCGAGGCGGCCGTGC TCAAGGCGCACGACCCGGGCCATTTCGAGCGTGTGCTGCGCCAGCGGCTCACAGACCCGTACGCCCTTTAA
Upstream 100 bases:
>100_bases AGGGGCGCCGCACCGGCAGCAGCCAGCGGCGACACCAACGGTTCGCGCGTCTGGAACGTGCTCAAGTTTTAATTTTTTAG CTCAGGGTTCAGTTTCAGGC
Downstream 100 bases:
>100_bases ACCAACCTTCAACCCCAGCAAGCCTGCGGCTCCCCGCCGCAGGGGGCAACTCCGGGCGTGGCGGCCCGACTTTGAGGCAA ACTGTGCCTTTGCAGCGTCC
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MAVFTEVSFDEAAAFLNALNLGQLQSIKGAAGGIENTNYFVDTDQGHYVLTLFERLTFEQLPYYLHLMKHLAARGIPVPD PAENGKGEILHRLKGKPTAVVNKLRGHSELAPTPAHCAAVGEMLARMHLAGLDYPRQQPNLRGLAWWNETVPVVLPHLTP EQRSLILGELAYQNHVTDSSACRSLPRGAVHADLFRDNVMFEDGKLTGFFDFYFAGCDTFLFDIGVCLNDWCIDLDSGAQ DSARADAFVAAYQSVRRLTAQERTLLPAMQRAGALRFWISRLWDFHLPREAAVLKAHDPGHFERVLRQRLTDPYAL
Sequences:
>Translated_316_residues MAVFTEVSFDEAAAFLNALNLGQLQSIKGAAGGIENTNYFVDTDQGHYVLTLFERLTFEQLPYYLHLMKHLAARGIPVPD PAENGKGEILHRLKGKPTAVVNKLRGHSELAPTPAHCAAVGEMLARMHLAGLDYPRQQPNLRGLAWWNETVPVVLPHLTP EQRSLILGELAYQNHVTDSSACRSLPRGAVHADLFRDNVMFEDGKLTGFFDFYFAGCDTFLFDIGVCLNDWCIDLDSGAQ DSARADAFVAAYQSVRRLTAQERTLLPAMQRAGALRFWISRLWDFHLPREAAVLKAHDPGHFERVLRQRLTDPYAL >Mature_315_residues AVFTEVSFDEAAAFLNALNLGQLQSIKGAAGGIENTNYFVDTDQGHYVLTLFERLTFEQLPYYLHLMKHLAARGIPVPDP AENGKGEILHRLKGKPTAVVNKLRGHSELAPTPAHCAAVGEMLARMHLAGLDYPRQQPNLRGLAWWNETVPVVLPHLTPE QRSLILGELAYQNHVTDSSACRSLPRGAVHADLFRDNVMFEDGKLTGFFDFYFAGCDTFLFDIGVCLNDWCIDLDSGAQD SARADAFVAAYQSVRRLTAQERTLLPAMQRAGALRFWISRLWDFHLPREAAVLKAHDPGHFERVLRQRLTDPYAL
Specific function: Unknown
COG id: COG2334
COG function: function code R; Putative homoserine kinase type II (protein kinase fold)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pseudomonas-type thrB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR005280 - InterPro: IPR011009 [H]
Pfam domain/function: PF01636 APH [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 35342; Mature: 35210
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVFTEVSFDEAAAFLNALNLGQLQSIKGAAGGIENTNYFVDTDQGHYVLTLFERLTFEQ CCEEECCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHH LPYYLHLMKHLAARGIPVPDPAENGKGEILHRLKGKPTAVVNKLRGHSELAPTPAHCAAV HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHH GEMLARMHLAGLDYPRQQPNLRGLAWWNETVPVVLPHLTPEQRSLILGELAYQNHVTDSS HHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHCCCCHH ACRSLPRGAVHADLFRDNVMFEDGKLTGFFDFYFAGCDTFLFDIGVCLNDWCIDLDSGAQ HHHHCCCCCHHHHHHHCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC DSARADAFVAAYQSVRRLTAQERTLLPAMQRAGALRFWISRLWDFHLPREAAVLKAHDPG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEECCCCH HFERVLRQRLTDPYAL HHHHHHHHHCCCCCCC >Mature Secondary Structure AVFTEVSFDEAAAFLNALNLGQLQSIKGAAGGIENTNYFVDTDQGHYVLTLFERLTFEQ CEEECCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHH LPYYLHLMKHLAARGIPVPDPAENGKGEILHRLKGKPTAVVNKLRGHSELAPTPAHCAAV HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHH GEMLARMHLAGLDYPRQQPNLRGLAWWNETVPVVLPHLTPEQRSLILGELAYQNHVTDSS HHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHCCCCHH ACRSLPRGAVHADLFRDNVMFEDGKLTGFFDFYFAGCDTFLFDIGVCLNDWCIDLDSGAQ HHHHCCCCCHHHHHHHCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC DSARADAFVAAYQSVRRLTAQERTLLPAMQRAGALRFWISRLWDFHLPREAAVLKAHDPG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEECCCCH HFERVLRQRLTDPYAL HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA