| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787607
Identifier: 91787607
GI number: 91787607
Start: 1780025
End: 1782319
Strand: Reverse
Name: 91787607
Synonym: Bpro_1725
Alternate gene names: NA
Gene position: 1782319-1780025 (Counterclockwise)
Preceding gene: 91787608
Following gene: 91787602
Centisome position: 34.27
GC content: 63.14
Gene sequence:
>2295_bases ATGCGTGAATCGGCAACGCGATCCCGTTGCCAGTTTCAATGCAATGTCACACGAAAGCCGCCAATGTCCAAGCCAACCCA CACCGATAGCACCTATATCGACCCTGATGACCTGAACAACAACACGTCGAACAATCCGTCTTTCGAAACGGTTCTGGATG CCCGCCTGAGCCGCCGCTCGGTGTTGCGGAGCTCGGTAGGCACCGCTGCCGCCGCCGTCTTTGGCAGCCTGGCCGCGTCG GCCGTGGGTATCGGCGAGGAAGCTGTCGCCGCACCCCATGAAAAGCTGCTGGGTTTCAAGGAAGTGGCCAAAGGCCTGGC CGACATGGTGGTGGTGCCGCCCGGCTATACCACCAGCGTGCTCTACGCGTTGGGCGACCCCCTGACGGCGTCCACACCCG CCTACAAAAACGACGGCACCGACAGCGACTATGAAAACCGCGCGGGCGACCACCACGACGGCATGGAGTGGTTCGGGCTG GACAACAACGGCCGGCCATCAAACAACGCCAATAGCCGCGGCCTGCTGGCAATGAACCACGAAGCGACAACCGACGAAAA ACTCTCGTCCTTCTTCCTGCATGCCAACGGCGGCACCAGCAGCCTGCCGCGCCCGGCCAGCGAAGTCGAAAAAGAGCTTG CCATCCATGGTGTGGCCGTGGTCGAAGTCCGCCGCAAGGGCGCCAAGTGGGAATATCTCAAAGACTCCGCTTTCAACACA CGCCTGACACCGCTGAGCGAAATCGAGATTGCCGGGCCAGCACGCGGCAACCCGCTGATGGTCACCAGGTTCTCGCCCAA CGGCACCAAAACCCGCGGCACGCTGAACAACTGCGGTACCGGCAAAACGCCCTGGGGCACCTTTTTGACCGGCGAGGAAA ACTGGGCCGGCTACTTCACGCGACCCAAGGGCGATGACGCGGCCCGCGAAGGCCACAAAAGCGTCACCGCACTGGTGCGC TACGGCCGCGCAGAAGGCGCCAGCACGCGCCACGGCTGGGAAACCGCCGGTAAGGACGACAGGTTCGCGCGCTGGATCAA CGCCAAGACCGGCACCTCCGCCGATGGCAGCGACGACTACCGCAACGAGCTCAACGGCATGGGCTACATCGTCGAGATGG ACGCCTACAACAAAACAAAACTTGCCAAAAAACGCACCGGCCTGGGCCGTTTCGCCCATGAAAGCGCGGCATTCGGCAAA GTGGTGCCCGGCCAGCCGCTGGCCATGTACCAGGGCGACGATTCGCGCAACGAGTACATCTACAAGTGGGTGTCTGCCGC CAAATGGGATGCGGCTGACGCCAACCCGGCCGACCGCCTGGCCGCCGGTGACAAGTACCTCGACAACGGCAAGCTCTACG CAGCCAGATTCAACGCCGACGGCACCGGCCAGTGGCTGGAGCTTTCGCAAACCAACCCGGCAGTTGCCGGTTATGCCAAA TACCCGTTCGCCGATCAGGCCGACATCGCCGTGAACACGCGCCTGGCGGGCGACGCCGTGGGTGCCACCAAAATGGACCG CCCCGAATGGTGCTCGGTCAACCCGGCCAATGGTGAAATTTATTACTCGCTGACCAACAACAGCAACCGCCGTGTCGAGC CCAGCGGTTCGTCGCAGCTGGCCCCCGACAGCGCCAACCCGCGTGCCTACTCCGACATCAAGGGCACAGTTACGGTGCAA ACCGGCAATCCACATGGCCACATCCTGCGCATGAAGGAAGGCGCCGCTGGCTCGGCAGCGACCAGCTTCACCTGGGACGT GTATCTTTTTGGCGCCGAAGCCAGCGCAGCACCCGGCTCGGTGAATTTGTCGAAATTGACGGGCGAACAGGATTTTTCGA GCCCTGACGGCCTGGCCTTCAGCCCAAGCACGGGCATTTGCTGGATCCAGACCGACGACGGCGCCTACACCGACGTCACC AACTGCATGATGCTGGCCGGCCTGCCGGGTCAGGTGGGCGACGGCCGCAAGGTCACGCTGAACTACCCCAAAGCGGATGG TGGCGCGCTGACGGTTGACACCTACGTCGGCAAGGCACCGACGCCCGACAAGCTCAAGCGCTTTCTGGTGGGGCCAGTGG CTTGCGAGATCACGGGGCTGGCCGAAACACCGGACGGCAAGACCCTGTTTGTGAACATCCAGCACCCAGGCGAGACTACC GCACAGGCCAACGTCGGCGACCCGGCCAAATACACCAGCCAGTGGCCGGCCAATGCGGGTTACGGCGCCGGCAAACGCCC GCGCTCGGCCACTATCGTGATCACGAAAAACGACGGTGGGCGTATCGGCAGCTGA
Upstream 100 bases:
>100_bases GGCATTCACAGGCAAGGCTCATACGCGAGCCTGATCCCCGCATATCCCGGCAAGCCTGGGGCGAGCGGGCGTCACGGAAT TGACACCTTTCTTTCACACA
Downstream 100 bases:
>100_bases CGCGCCGGCGCCAGGCACCAAACAGGGCCAGGTGCGGGGCAGGCGCCTGATGCAGGTCAAGTCACGGCCTGCCGGGGAGC CGGCGATGGCTGCTGCCTTT
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: Phosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Twin-Arginine Translocation Pathway Signal Protein; UxpB Protein; DTDP-Glucose 4 6-Dehydratase; Twin Arginine Translocation Pathway Signal Protein; DTDP-D-Glucose 4 6-Dehydratase; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Alkaline Phosphatase Family Protein; Exported Protein
Number of amino acids: Translated: 764; Mature: 764
Protein sequence:
>764_residues MRESATRSRCQFQCNVTRKPPMSKPTHTDSTYIDPDDLNNNTSNNPSFETVLDARLSRRSVLRSSVGTAAAAVFGSLAAS AVGIGEEAVAAPHEKLLGFKEVAKGLADMVVVPPGYTTSVLYALGDPLTASTPAYKNDGTDSDYENRAGDHHDGMEWFGL DNNGRPSNNANSRGLLAMNHEATTDEKLSSFFLHANGGTSSLPRPASEVEKELAIHGVAVVEVRRKGAKWEYLKDSAFNT RLTPLSEIEIAGPARGNPLMVTRFSPNGTKTRGTLNNCGTGKTPWGTFLTGEENWAGYFTRPKGDDAAREGHKSVTALVR YGRAEGASTRHGWETAGKDDRFARWINAKTGTSADGSDDYRNELNGMGYIVEMDAYNKTKLAKKRTGLGRFAHESAAFGK VVPGQPLAMYQGDDSRNEYIYKWVSAAKWDAADANPADRLAAGDKYLDNGKLYAARFNADGTGQWLELSQTNPAVAGYAK YPFADQADIAVNTRLAGDAVGATKMDRPEWCSVNPANGEIYYSLTNNSNRRVEPSGSSQLAPDSANPRAYSDIKGTVTVQ TGNPHGHILRMKEGAAGSAATSFTWDVYLFGAEASAAPGSVNLSKLTGEQDFSSPDGLAFSPSTGICWIQTDDGAYTDVT NCMMLAGLPGQVGDGRKVTLNYPKADGGALTVDTYVGKAPTPDKLKRFLVGPVACEITGLAETPDGKTLFVNIQHPGETT AQANVGDPAKYTSQWPANAGYGAGKRPRSATIVITKNDGGRIGS
Sequences:
>Translated_764_residues MRESATRSRCQFQCNVTRKPPMSKPTHTDSTYIDPDDLNNNTSNNPSFETVLDARLSRRSVLRSSVGTAAAAVFGSLAAS AVGIGEEAVAAPHEKLLGFKEVAKGLADMVVVPPGYTTSVLYALGDPLTASTPAYKNDGTDSDYENRAGDHHDGMEWFGL DNNGRPSNNANSRGLLAMNHEATTDEKLSSFFLHANGGTSSLPRPASEVEKELAIHGVAVVEVRRKGAKWEYLKDSAFNT RLTPLSEIEIAGPARGNPLMVTRFSPNGTKTRGTLNNCGTGKTPWGTFLTGEENWAGYFTRPKGDDAAREGHKSVTALVR YGRAEGASTRHGWETAGKDDRFARWINAKTGTSADGSDDYRNELNGMGYIVEMDAYNKTKLAKKRTGLGRFAHESAAFGK VVPGQPLAMYQGDDSRNEYIYKWVSAAKWDAADANPADRLAAGDKYLDNGKLYAARFNADGTGQWLELSQTNPAVAGYAK YPFADQADIAVNTRLAGDAVGATKMDRPEWCSVNPANGEIYYSLTNNSNRRVEPSGSSQLAPDSANPRAYSDIKGTVTVQ TGNPHGHILRMKEGAAGSAATSFTWDVYLFGAEASAAPGSVNLSKLTGEQDFSSPDGLAFSPSTGICWIQTDDGAYTDVT NCMMLAGLPGQVGDGRKVTLNYPKADGGALTVDTYVGKAPTPDKLKRFLVGPVACEITGLAETPDGKTLFVNIQHPGETT AQANVGDPAKYTSQWPANAGYGAGKRPRSATIVITKNDGGRIGS >Mature_764_residues MRESATRSRCQFQCNVTRKPPMSKPTHTDSTYIDPDDLNNNTSNNPSFETVLDARLSRRSVLRSSVGTAAAAVFGSLAAS AVGIGEEAVAAPHEKLLGFKEVAKGLADMVVVPPGYTTSVLYALGDPLTASTPAYKNDGTDSDYENRAGDHHDGMEWFGL DNNGRPSNNANSRGLLAMNHEATTDEKLSSFFLHANGGTSSLPRPASEVEKELAIHGVAVVEVRRKGAKWEYLKDSAFNT RLTPLSEIEIAGPARGNPLMVTRFSPNGTKTRGTLNNCGTGKTPWGTFLTGEENWAGYFTRPKGDDAAREGHKSVTALVR YGRAEGASTRHGWETAGKDDRFARWINAKTGTSADGSDDYRNELNGMGYIVEMDAYNKTKLAKKRTGLGRFAHESAAFGK VVPGQPLAMYQGDDSRNEYIYKWVSAAKWDAADANPADRLAAGDKYLDNGKLYAARFNADGTGQWLELSQTNPAVAGYAK YPFADQADIAVNTRLAGDAVGATKMDRPEWCSVNPANGEIYYSLTNNSNRRVEPSGSSQLAPDSANPRAYSDIKGTVTVQ TGNPHGHILRMKEGAAGSAATSFTWDVYLFGAEASAAPGSVNLSKLTGEQDFSSPDGLAFSPSTGICWIQTDDGAYTDVT NCMMLAGLPGQVGDGRKVTLNYPKADGGALTVDTYVGKAPTPDKLKRFLVGPVACEITGLAETPDGKTLFVNIQHPGETT AQANVGDPAKYTSQWPANAGYGAGKRPRSATIVITKNDGGRIGS
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81572; Mature: 81572
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRESATRSRCQFQCNVTRKPPMSKPTHTDSTYIDPDDLNNNTSNNPSFETVLDARLSRRS CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHH VLRSSVGTAAAAVFGSLAASAVGIGEEAVAAPHEKLLGFKEVAKGLADMVVVPPGYTTSV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCHHHHHHHHHCEEEECCCCHHHH LYALGDPLTASTPAYKNDGTDSDYENRAGDHHDGMEWFGLDNNGRPSNNANSRGLLAMNH HEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECC EATTDEKLSSFFLHANGGTSSLPRPASEVEKELAIHGVAVVEVRRKGAKWEYLKDSAFNT CCCCHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEEEEHHCCCCEEEECCCCCCC RLTPLSEIEIAGPARGNPLMVTRFSPNGTKTRGTLNNCGTGKTPWGTFLTGEENWAGYFT CCCCHHHEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEE RPKGDDAAREGHKSVTALVRYGRAEGASTRHGWETAGKDDRFARWINAKTGTSADGSDDY CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCHHH RNELNGMGYIVEMDAYNKTKLAKKRTGLGRFAHESAAFGKVVPGQPLAMYQGDDSRNEYI HHHHCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCCEE YKWVSAAKWDAADANPADRLAAGDKYLDNGKLYAARFNADGTGQWLELSQTNPAVAGYAK EEEHHHCCCCCCCCCHHHHHHCCCCEECCCEEEEEEECCCCCCCEEEECCCCCCEECEEC YPFADQADIAVNTRLAGDAVGATKMDRPEWCSVNPANGEIYYSLTNNSNRRVEPSGSSQL CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCC APDSANPRAYSDIKGTVTVQTGNPHGHILRMKEGAAGSAATSFTWDVYLFGAEASAAPGS CCCCCCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCC VNLSKLTGEQDFSSPDGLAFSPSTGICWIQTDDGAYTDVTNCMMLAGLPGQVGDGRKVTL CCHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCHHHHHEEEEECCCCCCCCCCEEEE NYPKADGGALTVDTYVGKAPTPDKLKRFLVGPVACEITGLAETPDGKTLFVNIQHPGETT ECCCCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEECCCCCC AQANVGDPAKYTSQWPANAGYGAGKRPRSATIVITKNDGGRIGS CCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure MRESATRSRCQFQCNVTRKPPMSKPTHTDSTYIDPDDLNNNTSNNPSFETVLDARLSRRS CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHH VLRSSVGTAAAAVFGSLAASAVGIGEEAVAAPHEKLLGFKEVAKGLADMVVVPPGYTTSV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCHHHHHHHHHCEEEECCCCHHHH LYALGDPLTASTPAYKNDGTDSDYENRAGDHHDGMEWFGLDNNGRPSNNANSRGLLAMNH HEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECC EATTDEKLSSFFLHANGGTSSLPRPASEVEKELAIHGVAVVEVRRKGAKWEYLKDSAFNT CCCCHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEEEEHHCCCCEEEECCCCCCC RLTPLSEIEIAGPARGNPLMVTRFSPNGTKTRGTLNNCGTGKTPWGTFLTGEENWAGYFT CCCCHHHEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEE RPKGDDAAREGHKSVTALVRYGRAEGASTRHGWETAGKDDRFARWINAKTGTSADGSDDY CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCHHH RNELNGMGYIVEMDAYNKTKLAKKRTGLGRFAHESAAFGKVVPGQPLAMYQGDDSRNEYI HHHHCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCCEE YKWVSAAKWDAADANPADRLAAGDKYLDNGKLYAARFNADGTGQWLELSQTNPAVAGYAK EEEHHHCCCCCCCCCHHHHHHCCCCEECCCEEEEEEECCCCCCCEEEECCCCCCEECEEC YPFADQADIAVNTRLAGDAVGATKMDRPEWCSVNPANGEIYYSLTNNSNRRVEPSGSSQL CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCC APDSANPRAYSDIKGTVTVQTGNPHGHILRMKEGAAGSAATSFTWDVYLFGAEASAAPGS CCCCCCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCC VNLSKLTGEQDFSSPDGLAFSPSTGICWIQTDDGAYTDVTNCMMLAGLPGQVGDGRKVTL CCHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCHHHHHEEEEECCCCCCCCCCEEEE NYPKADGGALTVDTYVGKAPTPDKLKRFLVGPVACEITGLAETPDGKTLFVNIQHPGETT ECCCCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEECCCCCC AQANVGDPAKYTSQWPANAGYGAGKRPRSATIVITKNDGGRIGS CCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA