| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787552
Identifier: 91787552
GI number: 91787552
Start: 1724087
End: 1724854
Strand: Reverse
Name: 91787552
Synonym: Bpro_1670
Alternate gene names: NA
Gene position: 1724854-1724087 (Counterclockwise)
Preceding gene: 91787553
Following gene: 91787551
Centisome position: 33.17
GC content: 69.27
Gene sequence:
>768_bases ATGGAATTCGGCACCCTCAGACCGCTGCTGGCCAGCCTGGCTTTGCCACCCGTGGCGCCTTTGCTGCTCGCCTTGCTCGG TTTGCTGCTGGCCTTCCGGGGACGGCGCGGCGGCCTCTCGCTGGCGCTGGTGTCGGTGATGCTGCTGGGGCTGCTCAGCT GTCATGGCACGTCGGTCTGGCTGGCGCGCACCATACTGCCGCAATTCGCCCCTCTCCCCGTGGCCGCGCTGAAAACCGGC AAGGTGCAGGCTGTGGTCGTCTTGGGCGGCGGGGCGCTGCCGCAGGCGCCTGAATACGGCGAGGCCCAACCCAATGCACA CACGGCGGCACGCCTGCGCTATGGCGTCTGGCTGGCACGCCAGTCCGGCTTGCCCCTCGGGTTCAGCGGAGGCATGGGCT GGGCCGCCAGCGAGTCGCAGCGCGACTCTGAAGCCGAGGTGGCAAGGCGCATGGCCTTGCAGGACTACCGCCTCGCGCTG CGCTGGAGTGAAGCCGAGGCGCGTGACACAGCGGGCAATGCACGCCTGCTGGCGCCCCTGCTCCGGCGTGATGGCGTGCA GCGTATTGCCTTGGTCACCCACGCCTGGCACATGCCGCGCTCCGTCGCGGCGTTTGAGGCAGCCGGCCTCCAGGTCACAC CGGCGCCCATGGGCTATGTGATTCCTCTGGAGCGCGACATCCTGGAATGGATGCCTTCTGCGCACGGGCTGATGGCTTCG CGCAACGTACTGCGCGAGGGGCTGGCGCTGGCCCTGGCGCGCTTCTGA
Upstream 100 bases:
>100_bases GTGCGCAAACCGGCCTGCAGGCTTTTTACTGATACTGAGCTTTCAGGTGCGGCCGCCCCGGCGCGCGGGGTACTATCAGT TTCTTTTTTTATAGCAATTG
Downstream 100 bases:
>100_bases AACCGGTTGGCACCCGCAGGGTGTGATGATCGGCCGGGGGCGCCAGGTACGGCCTCTGACCCACCCGGTTGACGGTCGGA AAGCAAGGGGCTATATTACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MEFGTLRPLLASLALPPVAPLLLALLGLLLAFRGRRGGLSLALVSVMLLGLLSCHGTSVWLARTILPQFAPLPVAALKTG KVQAVVVLGGGALPQAPEYGEAQPNAHTAARLRYGVWLARQSGLPLGFSGGMGWAASESQRDSEAEVARRMALQDYRLAL RWSEAEARDTAGNARLLAPLLRRDGVQRIALVTHAWHMPRSVAAFEAAGLQVTPAPMGYVIPLERDILEWMPSAHGLMAS RNVLREGLALALARF
Sequences:
>Translated_255_residues MEFGTLRPLLASLALPPVAPLLLALLGLLLAFRGRRGGLSLALVSVMLLGLLSCHGTSVWLARTILPQFAPLPVAALKTG KVQAVVVLGGGALPQAPEYGEAQPNAHTAARLRYGVWLARQSGLPLGFSGGMGWAASESQRDSEAEVARRMALQDYRLAL RWSEAEARDTAGNARLLAPLLRRDGVQRIALVTHAWHMPRSVAAFEAAGLQVTPAPMGYVIPLERDILEWMPSAHGLMAS RNVLREGLALALARF >Mature_255_residues MEFGTLRPLLASLALPPVAPLLLALLGLLLAFRGRRGGLSLALVSVMLLGLLSCHGTSVWLARTILPQFAPLPVAALKTG KVQAVVVLGGGALPQAPEYGEAQPNAHTAARLRYGVWLARQSGLPLGFSGGMGWAASESQRDSEAEVARRMALQDYRLAL RWSEAEARDTAGNARLLAPLLRRDGVQRIALVTHAWHMPRSVAAFEAAGLQVTPAPMGYVIPLERDILEWMPSAHGLMAS RNVLREGLALALARF
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003848 - InterPro: IPR014729 [H]
Pfam domain/function: PF02698 DUF218 [H]
EC number: NA
Molecular weight: Translated: 27284; Mature: 27284
Theoretical pI: Translated: 11.14; Mature: 11.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFGTLRPLLASLALPPVAPLLLALLGLLLAFRGRRGGLSLALVSVMLLGLLSCHGTSVW CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHH LARTILPQFAPLPVAALKTGKVQAVVVLGGGALPQAPEYGEAQPNAHTAARLRYGVWLAR HHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEE QSGLPLGFSGGMGWAASESQRDSEAEVARRMALQDYRLALRWSEAEARDTAGNARLLAPL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCHHHHCCCCCHHHHHHH LRRDGVQRIALVTHAWHMPRSVAAFEAAGLQVTPAPMGYVIPLERDILEWMPSAHGLMAS HHHCCHHHHHHHHHHHHCCHHHHHHHHCCCEECCCCCCEEEECHHHHHHHCCCHHHHHHH RNVLREGLALALARF HHHHHHHHHHHHHCC >Mature Secondary Structure MEFGTLRPLLASLALPPVAPLLLALLGLLLAFRGRRGGLSLALVSVMLLGLLSCHGTSVW CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHH LARTILPQFAPLPVAALKTGKVQAVVVLGGGALPQAPEYGEAQPNAHTAARLRYGVWLAR HHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEE QSGLPLGFSGGMGWAASESQRDSEAEVARRMALQDYRLALRWSEAEARDTAGNARLLAPL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCHHHHCCCCCHHHHHHH LRRDGVQRIALVTHAWHMPRSVAAFEAAGLQVTPAPMGYVIPLERDILEWMPSAHGLMAS HHHCCHHHHHHHHHHHHCCHHHHHHHHCCCEECCCCCCEEEECHHHHHHHCCCHHHHHHH RNVLREGLALALARF HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]