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The map label for this gene is ycdC [C]

Identifier: 91787551

GI number: 91787551

Start: 1723260

End: 1723967

Strand: Reverse

Name: ycdC [C]

Synonym: Bpro_1669

Alternate gene names: 91787551

Gene position: 1723967-1723260 (Counterclockwise)

Preceding gene: 91787552

Following gene: 91787550

Centisome position: 33.15

GC content: 59.6

Gene sequence:

>708_bases
ATGTCCCTTTCCAAACTCTTCTGCCCAACAGCCCCCGGGGTCGCCGCCAAGCGCGAACGCCGCAAGGAAGCCCGGCCCGG
CGAGCTGCTGGATGCCGCGCTGGATCTGTTCGTCGAAAAGGGCTTTGCCGCCACCCGGGCGGAAGAAGTGGCGGCGCGTG
CCGGCGTTTCCAAGGGCACCCTCTTTCTGTACTTTCAAAGCAAGGAAGAACTGCTCAAGGCGGTGGTGCGCGAAAACATC
TCCGGCCGTTTCAAGGAATGGAACGAGGAACTCGAGAACTTCGAAGGCACCAGTGCAGAAATGCTGGCCTATTGCATGAA
TATGTGGTGGGACCGCGTGGGTGCCACCAAAGCCTCGGGCATCACCAAGCTGATGATGAGCGAGGCAAAGAACTTCCCGG
AGATCGCGGCCTTTTACCAGCAGGAAGTGATCCAGCCGGGGCAGAGCCTGATCCGCCGCATTTTGCAACGAGGCATAGAG
CGCGGCGAGTTCCGCGACATGGACCTCGACTACGGCATCTATACCGTGATCGCGCCCATGATTTTCCTGATACTGTCCAA
ACACTCGATGGGCGTGTGCGTTCGCGACGACATCGACATGGACCCCAAAAAATACGTTGCCACTCAGGTGAACACCATTC
TTTACGGCATGAGTGTTCGCCCCGGCGATTCGGGCCAGGGCCAGAGCCAGGGCCCGGAGCAAGCCTGA

Upstream 100 bases:

>100_bases
GGTGTGATGATCGGCCGGGGGCGCCAGGTACGGCCTCTGACCCACCCGGTTGACGGTCGGAAAGCAAGGGGCTATATTAC
TAACCAGTCAGTCAGTAATC

Downstream 100 bases:

>100_bases
TCATGAAACGCTGGGTCCCATGGGCTGTGGCCCTGCTCGTCGTCCTGCTCGTGGTGGGCGGCGTGCTGCGCGCCCTGTCG
GCCCGCAAGGCCCAGCAGCA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator Tetr Family; Transcription Regulator TetR Family; Transcriptional Regulator Protein Tetr/Acrr-Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulatory Protein; TetR Family Transcription Regulator Protein; Transcriptional Regulator Protein; TRANSCRIPTIONal REGULATOR PROTEIN TetR/AcrR-Family

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MSLSKLFCPTAPGVAAKRERRKEARPGELLDAALDLFVEKGFAATRAEEVAARAGVSKGTLFLYFQSKEELLKAVVRENI
SGRFKEWNEELENFEGTSAEMLAYCMNMWWDRVGATKASGITKLMMSEAKNFPEIAAFYQQEVIQPGQSLIRRILQRGIE
RGEFRDMDLDYGIYTVIAPMIFLILSKHSMGVCVRDDIDMDPKKYVATQVNTILYGMSVRPGDSGQGQSQGPEQA

Sequences:

>Translated_235_residues
MSLSKLFCPTAPGVAAKRERRKEARPGELLDAALDLFVEKGFAATRAEEVAARAGVSKGTLFLYFQSKEELLKAVVRENI
SGRFKEWNEELENFEGTSAEMLAYCMNMWWDRVGATKASGITKLMMSEAKNFPEIAAFYQQEVIQPGQSLIRRILQRGIE
RGEFRDMDLDYGIYTVIAPMIFLILSKHSMGVCVRDDIDMDPKKYVATQVNTILYGMSVRPGDSGQGQSQGPEQA
>Mature_234_residues
SLSKLFCPTAPGVAAKRERRKEARPGELLDAALDLFVEKGFAATRAEEVAARAGVSKGTLFLYFQSKEELLKAVVRENIS
GRFKEWNEELENFEGTSAEMLAYCMNMWWDRVGATKASGITKLMMSEAKNFPEIAAFYQQEVIQPGQSLIRRILQRGIER
GEFRDMDLDYGIYTVIAPMIFLILSKHSMGVCVRDDIDMDPKKYVATQVNTILYGMSVRPGDSGQGQSQGPEQA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26324; Mature: 26192

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSKLFCPTAPGVAAKRERRKEARPGELLDAALDLFVEKGFAATRAEEVAARAGVSKGT
CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCE
LFLYFQSKEELLKAVVRENISGRFKEWNEELENFEGTSAEMLAYCMNMWWDRVGATKASG
EEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHH
ITKLMMSEAKNFPEIAAFYQQEVIQPGQSLIRRILQRGIERGEFRDMDLDYGIYTVIAPM
HHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
IFLILSKHSMGVCVRDDIDMDPKKYVATQVNTILYGMSVRPGDSGQGQSQGPEQA
HHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLSKLFCPTAPGVAAKRERRKEARPGELLDAALDLFVEKGFAATRAEEVAARAGVSKGT
CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCE
LFLYFQSKEELLKAVVRENISGRFKEWNEELENFEGTSAEMLAYCMNMWWDRVGATKASG
EEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHH
ITKLMMSEAKNFPEIAAFYQQEVIQPGQSLIRRILQRGIERGEFRDMDLDYGIYTVIAPM
HHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
IFLILSKHSMGVCVRDDIDMDPKKYVATQVNTILYGMSVRPGDSGQGQSQGPEQA
HHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA