| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is mmgC [H]
Identifier: 91787553
GI number: 91787553
Start: 1724923
End: 1726119
Strand: Reverse
Name: mmgC [H]
Synonym: Bpro_1671
Alternate gene names: 91787553
Gene position: 1726119-1724923 (Counterclockwise)
Preceding gene: 91787557
Following gene: 91787552
Centisome position: 33.19
GC content: 62.24
Gene sequence:
>1197_bases ATGAAAACCAAATTCAGCTGGGAAGACCCCCTGTTCCTGATGGAGCAGCTCAGCGACGACGAGCGCGCCATCGTGCACGC CGCGCACGAGTTCTGCCAGGAAAAACTGCAGCCCCGCGTGCTGATGGCCGCACGCCACGAAAAGTTCGACCGCGAGATCA TGAATGAAGCGGGCGCCATGGGCTTTCTGGGTTCGACCATTGAAGGCTACGGCTGCGCCGGCCTCAATTACGTCAGTTAC GGCCTGGTGGCGCGCGAAGTGGAGCGCGTGGACAGCGGCTACCGCAGCGCCATCAGCGTGCAAAGCTCGCTGGTCATGCA CCCGATCCATGCCTATGGCAGCGAGGCGCAGCGCCAGAAGTATTTGCCCAAGCTCGCCACCGGCGAATGGGTCGGCTGCT TCGGCCTGACCGAGCCCAACCACGGCTCCGACCCGGCCAGCATGCTGACGCGGGCCAAGCCCGTTGACGGGGGTTTCATC CTCAAGGGCTCCAAGATGTGGATCACCAACAGCCCGATTGCGGACGTGTTTGTGGTCTGGGCCAAGCTGGAAGACCCCGA CGGCAAGGTCGGCGGCCAGGAAAGCATCCGCGGCTTCCTGCTGGAAAAAGGCATGAAGGGCCTTTCCGCCCCCAAGATCG AGGGCAAGATGAGCTTGCGCGCCTCCATCACCGGTGAAATTGTCATGGACGACGTGTTTGTGCCCGAAGCGAATTTGCTG CCCAATGTGAGCGGCCTGAAAGGCCCGTTCGGATGCCTGAACAAGGCGCGCTACGGTATTGCCTGGGGCGCCCTGGGGGC TGCCGAAGACTGCTGGTTCCGCGCCCGCCAGTACACCATGGACCGCCAGCAGTTCGGCCGCCCGCTGGCGCAAAACCAGC TCATTCAAAAGAAGCTCGCAGACATGCAAACCGAGATCACGCTGGGCCTGCAAGCCTGCCTGCGCGTGGGCCGCCTGATG GACGAGGACAAGGCCATGCCTGAAATGATTTCGCTGATCAAGCGCAACTCCTGCGGCAAGTCGCTCGACATCGCCCGCAT GGCGCGCGACATGCACGGCGGCAACGGCATCCATGACGAATACCACGTGATCCGCCACATGATCAACCTGGAGACCGTCA ACACCTACGAAGGCACGCACGATGTGCACGCGCTGATTTTGGGGCGTGCGCAAACCGGCCTGCAGGCTTTTTACTGA
Upstream 100 bases:
>100_bases GCGGCGCAATGCGGCGCCCCAAGCCCTACACTTTGCAAAAGCCCCAACGCACTTCAGCGCACCTCAACGCATCTCGAATG CATCCAGAAGGAGACTCACC
Downstream 100 bases:
>100_bases TACTGAGCTTTCAGGTGCGGCCGCCCCGGCGCGCGGGGTACTATCAGTTTCTTTTTTTATAGCAATTGATGGAATTCGGC ACCCTCAGACCGCTGCTGGC
Product: acyl-CoA dehydrogenase-like protein
Products: crotonoyl-CoA; CO2; reduced acceptor
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MKTKFSWEDPLFLMEQLSDDERAIVHAAHEFCQEKLQPRVLMAARHEKFDREIMNEAGAMGFLGSTIEGYGCAGLNYVSY GLVAREVERVDSGYRSAISVQSSLVMHPIHAYGSEAQRQKYLPKLATGEWVGCFGLTEPNHGSDPASMLTRAKPVDGGFI LKGSKMWITNSPIADVFVVWAKLEDPDGKVGGQESIRGFLLEKGMKGLSAPKIEGKMSLRASITGEIVMDDVFVPEANLL PNVSGLKGPFGCLNKARYGIAWGALGAAEDCWFRARQYTMDRQQFGRPLAQNQLIQKKLADMQTEITLGLQACLRVGRLM DEDKAMPEMISLIKRNSCGKSLDIARMARDMHGGNGIHDEYHVIRHMINLETVNTYEGTHDVHALILGRAQTGLQAFY
Sequences:
>Translated_398_residues MKTKFSWEDPLFLMEQLSDDERAIVHAAHEFCQEKLQPRVLMAARHEKFDREIMNEAGAMGFLGSTIEGYGCAGLNYVSY GLVAREVERVDSGYRSAISVQSSLVMHPIHAYGSEAQRQKYLPKLATGEWVGCFGLTEPNHGSDPASMLTRAKPVDGGFI LKGSKMWITNSPIADVFVVWAKLEDPDGKVGGQESIRGFLLEKGMKGLSAPKIEGKMSLRASITGEIVMDDVFVPEANLL PNVSGLKGPFGCLNKARYGIAWGALGAAEDCWFRARQYTMDRQQFGRPLAQNQLIQKKLADMQTEITLGLQACLRVGRLM DEDKAMPEMISLIKRNSCGKSLDIARMARDMHGGNGIHDEYHVIRHMINLETVNTYEGTHDVHALILGRAQTGLQAFY >Mature_398_residues MKTKFSWEDPLFLMEQLSDDERAIVHAAHEFCQEKLQPRVLMAARHEKFDREIMNEAGAMGFLGSTIEGYGCAGLNYVSY GLVAREVERVDSGYRSAISVQSSLVMHPIHAYGSEAQRQKYLPKLATGEWVGCFGLTEPNHGSDPASMLTRAKPVDGGFI LKGSKMWITNSPIADVFVVWAKLEDPDGKVGGQESIRGFLLEKGMKGLSAPKIEGKMSLRASITGEIVMDDVFVPEANLL PNVSGLKGPFGCLNKARYGIAWGALGAAEDCWFRARQYTMDRQQFGRPLAQNQLIQKKLADMQTEITLGLQACLRVGRLM DEDKAMPEMISLIKRNSCGKSLDIARMARDMHGGNGIHDEYHVIRHMINLETVNTYEGTHDVHALILGRAQTGLQAFY
Specific function: Catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA. [C]
COG id: COG1960
COG function: function code I; Acyl-CoA dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyl-CoA dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4503943, Length=398, Percent_Identity=68.8442211055276, Blast_Score=569, Evalue=1e-162, Organism=Homo sapiens, GI7669494, Length=378, Percent_Identity=67.989417989418, Blast_Score=532, Evalue=1e-151, Organism=Homo sapiens, GI226958412, Length=378, Percent_Identity=32.2751322751323, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI226958414, Length=346, Percent_Identity=32.3699421965318, Blast_Score=172, Evalue=4e-43, Organism=Homo sapiens, GI4501859, Length=372, Percent_Identity=30.3763440860215, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI4557233, Length=376, Percent_Identity=28.9893617021277, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI4557235, Length=345, Percent_Identity=34.4927536231884, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI76496475, Length=390, Percent_Identity=32.8205128205128, Blast_Score=155, Evalue=4e-38, Organism=Homo sapiens, GI4557231, Length=379, Percent_Identity=29.287598944591, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI187960098, Length=379, Percent_Identity=29.287598944591, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI7656849, Length=377, Percent_Identity=29.7082228116711, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI21361497, Length=399, Percent_Identity=28.8220551378446, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI4501857, Length=373, Percent_Identity=29.4906166219839, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI48976061, Length=279, Percent_Identity=24.7311827956989, Blast_Score=66, Evalue=7e-11, Organism=Homo sapiens, GI211971008, Length=279, Percent_Identity=24.7311827956989, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1786223, Length=279, Percent_Identity=25.4480286738351, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI87081958, Length=329, Percent_Identity=25.8358662613982, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI87081702, Length=270, Percent_Identity=26.6666666666667, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17534353, Length=393, Percent_Identity=65.9033078880407, Blast_Score=544, Evalue=1e-155, Organism=Caenorhabditis elegans, GI17538396, Length=393, Percent_Identity=31.2977099236641, Blast_Score=165, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17508101, Length=372, Percent_Identity=29.8387096774194, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17534899, Length=377, Percent_Identity=30.5039787798408, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17569725, Length=376, Percent_Identity=28.9893617021277, Blast_Score=154, Evalue=7e-38, Organism=Caenorhabditis elegans, GI17570075, Length=377, Percent_Identity=28.6472148541114, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI71985184, Length=355, Percent_Identity=30.7042253521127, Blast_Score=142, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17506239, Length=369, Percent_Identity=27.3712737127371, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI71990804, Length=264, Percent_Identity=33.7121212121212, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI71985192, Length=263, Percent_Identity=32.6996197718631, Blast_Score=134, Evalue=7e-32, Organism=Caenorhabditis elegans, GI17533517, Length=378, Percent_Identity=26.1904761904762, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI71982178, Length=281, Percent_Identity=28.8256227758007, Blast_Score=128, Evalue=4e-30, Organism=Caenorhabditis elegans, GI32563615, Length=229, Percent_Identity=34.4978165938865, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17551932, Length=405, Percent_Identity=23.4567901234568, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17505929, Length=379, Percent_Identity=23.7467018469657, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI19920834, Length=398, Percent_Identity=67.0854271356784, Blast_Score=534, Evalue=1e-152, Organism=Drosophila melanogaster, GI24666513, Length=369, Percent_Identity=30.6233062330623, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI21356377, Length=377, Percent_Identity=29.1777188328912, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24660351, Length=379, Percent_Identity=30.3430079155673, Blast_Score=164, Evalue=9e-41, Organism=Drosophila melanogaster, GI24646207, Length=376, Percent_Identity=29.7872340425532, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI21355753, Length=383, Percent_Identity=29.7650130548303, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI281363737, Length=338, Percent_Identity=31.6568047337278, Blast_Score=145, Evalue=5e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006089 - InterPro: IPR006092 - InterPro: IPR006090 - InterPro: IPR006091 - InterPro: IPR009075 - InterPro: IPR013786 - InterPro: IPR009100 [H]
Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]
EC number: 1.3.99.7
Molecular weight: Translated: 44129; Mature: 44129
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS00073 ACYL_COA_DH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKFSWEDPLFLMEQLSDDERAIVHAAHEFCQEKLQPRVLMAARHEKFDREIMNEAGAM CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC GFLGSTIEGYGCAGLNYVSYGLVAREVERVDSGYRSAISVQSSLVMHPIHAYGSEAQRQK HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH YLPKLATGEWVGCFGLTEPNHGSDPASMLTRAKPVDGGFILKGSKMWITNSPIADVFVVW CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCEEEECCEEEEECCCHHHHEEEE AKLEDPDGKVGGQESIRGFLLEKGMKGLSAPKIEGKMSLRASITGEIVMDDVFVPEANLL EEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEECEECCCCCCC PNVSGLKGPFGCLNKARYGIAWGALGAAEDCWFRARQYTMDRQQFGRPLAQNQLIQKKLA CCCCCCCCCHHHHHHHHCCEEECCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH DMQTEITLGLQACLRVGRLMDEDKAMPEMISLIKRNSCGKSLDIARMARDMHGGNGIHDE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHH YHVIRHMINLETVNTYEGTHDVHALILGRAQTGLQAFY HHHHHHHHHHCEEECCCCCHHHHHHEEHHHHHHHHHCC >Mature Secondary Structure MKTKFSWEDPLFLMEQLSDDERAIVHAAHEFCQEKLQPRVLMAARHEKFDREIMNEAGAM CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC GFLGSTIEGYGCAGLNYVSYGLVAREVERVDSGYRSAISVQSSLVMHPIHAYGSEAQRQK HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH YLPKLATGEWVGCFGLTEPNHGSDPASMLTRAKPVDGGFILKGSKMWITNSPIADVFVVW CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCEEEECCEEEEECCCHHHHEEEE AKLEDPDGKVGGQESIRGFLLEKGMKGLSAPKIEGKMSLRASITGEIVMDDVFVPEANLL EEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEECEECCCCCCC PNVSGLKGPFGCLNKARYGIAWGALGAAEDCWFRARQYTMDRQQFGRPLAQNQLIQKKLA CCCCCCCCCHHHHHHHHCCEEECCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH DMQTEITLGLQACLRVGRLMDEDKAMPEMISLIKRNSCGKSLDIARMARDMHGGNGIHDE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHH YHVIRHMINLETVNTYEGTHDVHALILGRAQTGLQAFY HHHHHHHHHHCEEECCCCCHHHHHHEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: glutaryl-CoA; acceptor
Specific reaction: glutaryl-CoA + acceptor = crotonoyl-CoA + CO2 + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8759838; 8969508; 9384377 [H]