| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yaiE [C]
Identifier: 91787484
GI number: 91787484
Start: 1652125
End: 1652451
Strand: Reverse
Name: yaiE [C]
Synonym: Bpro_1600
Alternate gene names: 91787484
Gene position: 1652451-1652125 (Counterclockwise)
Preceding gene: 91787485
Following gene: 91787483
Centisome position: 31.78
GC content: 56.57
Gene sequence:
>327_bases ATGATTACCGAAAAAATCGACAACATCAGCGTTACCACCAAGGCCAATGTCTACTTTGACGGCAAATGCGTGAGCCATGG CATCACTTTTACTGACGGCACCAAAAAGTCCGTCGGCGTGATTCTTCCCGCCACCCTGACCTTCAATACCGGCGCGCCGG AAATCATGGAATGCGTGGCCGGCGCCTGCGAGTACAGGCTGGCCGGCAGCGACAGCTGGGTCAAATCCGCAGCGGGCGAG AAATTCAGCGTGCCGGGCAACGCGAAGTTTGACATCCGCGTGGCAGAAGGCTTCGAGGCCTACCACTACATCTGCCACTT CGGTTAA
Upstream 100 bases:
>100_bases GTGGGGCACGGGGCTAGGGCAAGGCCCGGGTAACCTAAAATCAGGGATTACCGCAGCAACCTCTGTCTGCGACGTTTTTC CTGTTTACCCCCATCCATTC
Downstream 100 bases:
>100_bases TCGCCCCTCCCCTCAGGAACCCATTTCATGGCCACCATCCTCCAGAACCTGCCCGCCGGCCAGAAAGTCGGCATCGCCTT TTCCGGCGGCCTTGATACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MITEKIDNISVTTKANVYFDGKCVSHGITFTDGTKKSVGVILPATLTFNTGAPEIMECVAGACEYRLAGSDSWVKSAAGE KFSVPGNAKFDIRVAEGFEAYHYICHFG
Sequences:
>Translated_108_residues MITEKIDNISVTTKANVYFDGKCVSHGITFTDGTKKSVGVILPATLTFNTGAPEIMECVAGACEYRLAGSDSWVKSAAGE KFSVPGNAKFDIRVAEGFEAYHYICHFG >Mature_108_residues MITEKIDNISVTTKANVYFDGKCVSHGITFTDGTKKSVGVILPATLTFNTGAPEIMECVAGACEYRLAGSDSWVKSAAGE KFSVPGNAKFDIRVAEGFEAYHYICHFG
Specific function: Unknown
COG id: COG3123
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0345 family
Homologues:
Organism=Escherichia coli, GI1786590, Length=94, Percent_Identity=35.1063829787234, Blast_Score=64, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1600_POLSJ (Q12D54)
Other databases:
- EMBL: CP000316 - RefSeq: YP_548436.1 - ProteinModelPortal: Q12D54 - SMR: Q12D54 - STRING: Q12D54 - GeneID: 4015765 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_1600 - NMPDR: fig|296591.1.peg.193 - eggNOG: COG3123 - HOGENOM: HBG297920 - OMA: TFNTGAP - PhylomeDB: Q12D54 - ProtClustDB: CLSK723345 - BioCyc: PSP296591:BPRO_1600-MONOMER - HAMAP: MF_01537 - InterPro: IPR009664 - InterPro: IPR014710 - Gene3D: G3DSA:2.60.120.10
Pfam domain/function: PF06865 DUF1255
EC number: NA
Molecular weight: Translated: 11604; Mature: 11604
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITEKIDNISVTTKANVYFDGKCVSHGITFTDGTKKSVGVILPATLTFNTGAPEIMECVA CCCCCCCCEEEEEEEEEEECCEEECCCEEECCCCCCCCEEEEEEEEEECCCCHHHHHHHH GACEYRLAGSDSWVKSAAGEKFSVPGNAKFDIRVAEGFEAYHYICHFG HHCEEEECCCCCHHHHCCCCEEECCCCCEEEEEECCCCCEEEEEEECC >Mature Secondary Structure MITEKIDNISVTTKANVYFDGKCVSHGITFTDGTKKSVGVILPATLTFNTGAPEIMECVA CCCCCCCCEEEEEEEEEEECCEEECCCEEECCCCCCCCEEEEEEEEEECCCCHHHHHHHH GACEYRLAGSDSWVKSAAGEKFSVPGNAKFDIRVAEGFEAYHYICHFG HHCEEEECCCCCHHHHCCCCEEECCCCCEEEEEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA