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The map label for this gene is ycfJ [H]

Identifier: 91787485

GI number: 91787485

Start: 1652663

End: 1653367

Strand: Reverse

Name: ycfJ [H]

Synonym: Bpro_1601

Alternate gene names: 91787485

Gene position: 1653367-1652663 (Counterclockwise)

Preceding gene: 91787486

Following gene: 91787484

Centisome position: 31.79

GC content: 64.68

Gene sequence:

>705_bases
ATGAAAAAAGCATTTGTTATTTCCACCGTTGCGGCTGCAGCAACCCTGGCGGCCCTGCCCGCCTTTGCCACCGACATCCT
GGCGCGGGTGATTTCCAGCACACCGGTGGTGCAGCAGGTTGCCGTGCCCCGCCAGGTGTGCAGCAACGAGGCGGTCATCA
TGCAGGCGCCCAAGTCGGGCGCGGGCGCCCTGATGGGTGCGCTGGCGGGTGGCGCGGCCGGCAACGCCATCGGCAATGGC
GGCGGCCGGGCTGTGGCCACCGTCATCGGACTGGTAGGGGGTGCCATGATTGGCGACCGCATCGAGGGGCCCAACAACCA
GGTGCAAAACGTGCAGCAGTGCAGCACGCAGACCTTCTATGAAAACCGGCCCAGCCACTACAACGTCGTGTACGAATACC
AGGGCACCCAGTACAACGTGCAGATGGCCAACGACCCGGGCCAGTATGTACGGCTGCAGGTCACACCGGTCGGCGCCATA
ACGCCCGGCGCCCAACCGGCACAGCCCACGCAGCCGCAGAGCTTCATCCAGCCGGCACCGCAGCAGCCGGTGTACGTGCA
GCCCGTGGTGACAGCCCCTGTGATGTATCAGTCTTATCCCGCCTACTACGCCCGGCCTTACTACGCGCCGTATTACGCAC
CCATTGGCCTCTCGCTGAACTTCGGCTACAGCCGGGGCTATGGCGGACATCATCACTGGCGTTGA

Upstream 100 bases:

>100_bases
CGGCGAACAGTCCTTGCCTCCCGCAGGGCGATTGTTCGGGACCGGGTACAAGGCGGCAAACGCTTGAAACTCAGCCACCA
GCTGAAAAAGGGGTTGAATC

Downstream 100 bases:

>100_bases
GCTGAGTTGAACTGAGTTGAACTGAGCTTTCAGCGAATCATAAAAAAGGGGCATTGAATGCCCCCTTTTTTATGCCCCTG
TCGGCTTCAGCGACAGATGG

Product: 17 kDa surface antigen

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MKKAFVISTVAAAATLAALPAFATDILARVISSTPVVQQVAVPRQVCSNEAVIMQAPKSGAGALMGALAGGAAGNAIGNG
GGRAVATVIGLVGGAMIGDRIEGPNNQVQNVQQCSTQTFYENRPSHYNVVYEYQGTQYNVQMANDPGQYVRLQVTPVGAI
TPGAQPAQPTQPQSFIQPAPQQPVYVQPVVTAPVMYQSYPAYYARPYYAPYYAPIGLSLNFGYSRGYGGHHHWR

Sequences:

>Translated_234_residues
MKKAFVISTVAAAATLAALPAFATDILARVISSTPVVQQVAVPRQVCSNEAVIMQAPKSGAGALMGALAGGAAGNAIGNG
GGRAVATVIGLVGGAMIGDRIEGPNNQVQNVQQCSTQTFYENRPSHYNVVYEYQGTQYNVQMANDPGQYVRLQVTPVGAI
TPGAQPAQPTQPQSFIQPAPQQPVYVQPVVTAPVMYQSYPAYYARPYYAPYYAPIGLSLNFGYSRGYGGHHHWR
>Mature_234_residues
MKKAFVISTVAAAATLAALPAFATDILARVISSTPVVQQVAVPRQVCSNEAVIMQAPKSGAGALMGALAGGAAGNAIGNG
GGRAVATVIGLVGGAMIGDRIEGPNNQVQNVQQCSTQTFYENRPSHYNVVYEYQGTQYNVQMANDPGQYVRLQVTPVGAI
TPGAQPAQPTQPQSFIQPAPQQPVYVQPVVTAPVMYQSYPAYYARPYYAPYYAPIGLSLNFGYSRGYGGHHHWR

Specific function: Unknown

COG id: COG3134

COG function: function code S; Predicted outer membrane lipoprotein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Rickettsia 17 kDa surface antigen [H]

Homologues:

Organism=Escherichia coli, GI1787353, Length=134, Percent_Identity=33.5820895522388, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 24777; Mature: 24777

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAFVISTVAAAATLAALPAFATDILARVISSTPVVQQVAVPRQVCSNEAVIMQAPKSG
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCC
AGALMGALAGGAAGNAIGNGGGRAVATVIGLVGGAMIGDRIEGPNNQVQNVQQCSTQTFY
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
ENRPSHYNVVYEYQGTQYNVQMANDPGQYVRLQVTPVGAITPGAQPAQPTQPQSFIQPAP
CCCCCCEEEEEEECCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCC
QQPVYVQPVVTAPVMYQSYPAYYARPYYAPYYAPIGLSLNFGYSRGYGGHHHWR
CCCEEEEEHHCCCCHHHCCCCHHCCCCCCCEECCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKKAFVISTVAAAATLAALPAFATDILARVISSTPVVQQVAVPRQVCSNEAVIMQAPKSG
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCC
AGALMGALAGGAAGNAIGNGGGRAVATVIGLVGGAMIGDRIEGPNNQVQNVQQCSTQTFY
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
ENRPSHYNVVYEYQGTQYNVQMANDPGQYVRLQVTPVGAITPGAQPAQPTQPQSFIQPAP
CCCCCCEEEEEEECCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCC
QQPVYVQPVVTAPVMYQSYPAYYARPYYAPYYAPIGLSLNFGYSRGYGGHHHWR
CCCEEEEEHHCCCCHHHCCCCHHCCCCCCCEECCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]