| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787416
Identifier: 91787416
GI number: 91787416
Start: 1579896
End: 1580414
Strand: Direct
Name: 91787416
Synonym: Bpro_1524
Alternate gene names: NA
Gene position: 1579896-1580414 (Clockwise)
Preceding gene: 91787415
Following gene: 91787417
Centisome position: 30.38
GC content: 48.17
Gene sequence:
>519_bases GTGGAAATGCACACAGCAGTAGAGACGCTTAGCTTAGCAAGTGAGCTCCAGCGGCTAATACACAAGGAAATTAAGCCGCC GTCCGCTACTGCGCCGTCCTACGATGAGCCTGTGGTTTACATGGCCTTGGTAAGAAATACCCGAGGCTACATCGAGCGAG TTTCACATCAAATTAACGGCAGTTATCAAAACGGCTGGTACGACGCAGCTTCGGTGATGATCCGCCGCCTTATCGAAACG CTGATCATCGAGTGTTATGAAGCTCACAAAATTGAAAGCAAAATCAAAGATAAGGACGGAAACTACTTTTTTCTAAGAGA CCTAATAGACATGGCTCTTGCAGAGAAGTCCTGGACCATCGGTCGTAGCGTGAGGCAAGTATTACCAAAACTAAAAGACG TCGGTGACAAGGCTGCCCATAATCGACGCTATAACGCCCACCGAGAAGACATCGACAAAGTCATTCCTGCTCTTCGTGAC ACCATTCAGGAGCTGCTCTCATTGGCGCAACTCAAGTAA
Upstream 100 bases:
>100_bases CGATGTACAGGTGCACATCAGCCCGGATACAACACCGGAGCAAATTGATCGAATTTTTGAAAGTATGTCCAAGCATCTCG GCTCGTACATTGCTTGAGGC
Downstream 100 bases:
>100_bases ACCTTCAGGTCTGAACTATCTGTGACGAGAAAGGTGTAGGTGAACGCGGTGACTGATCCGTTCCCTGAGTATTTGGTTCT TGTACTTGGACTGTCAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MEMHTAVETLSLASELQRLIHKEIKPPSATAPSYDEPVVYMALVRNTRGYIERVSHQINGSYQNGWYDAASVMIRRLIET LIIECYEAHKIESKIKDKDGNYFFLRDLIDMALAEKSWTIGRSVRQVLPKLKDVGDKAAHNRRYNAHREDIDKVIPALRD TIQELLSLAQLK
Sequences:
>Translated_172_residues MEMHTAVETLSLASELQRLIHKEIKPPSATAPSYDEPVVYMALVRNTRGYIERVSHQINGSYQNGWYDAASVMIRRLIET LIIECYEAHKIESKIKDKDGNYFFLRDLIDMALAEKSWTIGRSVRQVLPKLKDVGDKAAHNRRYNAHREDIDKVIPALRD TIQELLSLAQLK >Mature_172_residues MEMHTAVETLSLASELQRLIHKEIKPPSATAPSYDEPVVYMALVRNTRGYIERVSHQINGSYQNGWYDAASVMIRRLIET LIIECYEAHKIESKIKDKDGNYFFLRDLIDMALAEKSWTIGRSVRQVLPKLKDVGDKAAHNRRYNAHREDIDKVIPALRD TIQELLSLAQLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19808; Mature: 19808
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMHTAVETLSLASELQRLIHKEIKPPSATAPSYDEPVVYMALVRNTRGYIERVSHQING CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC SYQNGWYDAASVMIRRLIETLIIECYEAHKIESKIKDKDGNYFFLRDLIDMALAEKSWTI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHH GRSVRQVLPKLKDVGDKAAHNRRYNAHREDIDKVIPALRDTIQELLSLAQLK HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEMHTAVETLSLASELQRLIHKEIKPPSATAPSYDEPVVYMALVRNTRGYIERVSHQING CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC SYQNGWYDAASVMIRRLIETLIIECYEAHKIESKIKDKDGNYFFLRDLIDMALAEKSWTI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHH GRSVRQVLPKLKDVGDKAAHNRRYNAHREDIDKVIPALRDTIQELLSLAQLK HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA